RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 DEPDC1Q5TB30 811 aa4.87□□□□□ -1.63
BRCA1-204ENST00000412061 INO80CQ6PI98 192 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-204ENST00000412061 RNF207Q6ZRF8 634 aa4.87□□□□□ -1.63
BRCA1-204ENST00000412061 RASGRP2Q7LDG7 609 aa4.87□□□□□ -1.63
BRCA1-204ENST00000412061 ABRAQ8N0Z2 381 aa4.87□□□□□ -1.63
BRCA1-204ENST00000412061 ANKRD44Q8N8A2 993 aa4.87□□□□□ -1.63
BRCA1-204ENST00000412061 LINS1Q8NG48 757 aa4.87□□□□□ -1.63
BRCA1-204ENST00000412061 ABHD5Q8WTS1 349 aa4.87□□□□□ -1.63
BRCA1-204ENST00000412061 ATG4AQ8WYN0 398 aa4.87□□□□□ -1.63
BRCA1-204ENST00000412061 KTI12Q96EK9 354 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-204ENST00000412061 PTCD3Q96EY7 689 aaKnown RBP4.87□□□□□ -1.63
BRCA1-204ENST00000412061 PLEKHG4BQ96PX9 1271 aa4.87□□□□□ -1.63
BRCA1-204ENST00000412061 HIST1H2AAQ96QV6 131 aa4.87□□□□□ -1.63
BRCA1-204ENST00000412061 TTPALQ9BTX7 342 aa4.87□□□□□ -1.63
BRCA1-204ENST00000412061 PHF7Q9BWX1 381 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-204ENST00000412061 C1QTNF3Q9BXJ4 246 aa4.87□□□□□ -1.63
BRCA1-204ENST00000412061 EDEM3Q9BZQ6 932 aa4.87□□□□□ -1.63
BRCA1-204ENST00000412061 MUC13Q9H3R2 512 aa4.87□□□□□ -1.63
BRCA1-204ENST00000412061 RABEP2Q9H5N1 569 aa4.87□□□□□ -1.63
BRCA1-204ENST00000412061 PLEKHA2Q9HB19 425 aa4.87□□□□□ -1.63
BRCA1-204ENST00000412061 PDE7BQ9NP56 450 aa4.87□□□□□ -1.63
BRCA1-204ENST00000412061 PCDHB16Q9NRJ7 776 aa4.87□□□□□ -1.63
BRCA1-204ENST00000412061 VPS51Q9UID3 782 aa4.87□□□□□ -1.63
BRCA1-204ENST00000412061 RASAL2Q9UJF2 1139 aa4.87□□□□□ -1.63
BRCA1-204ENST00000412061 GTF3C4Q9UKN8 822 aa4.87□□□□□ -1.63
BRCA1-204ENST00000412061 TMCC3Q9ULS5 477 aa4.87□□□□□ -1.63
BRCA1-204ENST00000412061 SNX14Q9Y5W7 946 aa4.87□□□□□ -1.63
BRCA1-204ENST00000412061 FLT1P17948 1338 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 RTCAO00442 366 aaKnown RBP4.86□□□□□ -1.63
BRCA1-204ENST00000412061 PPM1DO15297 605 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 SLC7A4O43246 635 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 FOXD2O60548 495 aaPredicted RBP4.86□□□□□ -1.63
BRCA1-204ENST00000412061 CER1O95813 267 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 LMNAP02545 664 aaKnown RBP4.86□□□□□ -1.63
BRCA1-204ENST00000412061 ALADP13716 330 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 TM4SF1P30408 202 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 GATMP50440 423 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 NXPH1P58417 271 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 ADAM17P78536 824 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 TIAL1Q01085 375 aaKnown RBP eCLIP4.86□□□□□ -1.63
BRCA1-204ENST00000412061 SF3A3Q12874 501 aaKnown RBP eCLIP4.86□□□□□ -1.63
BRCA1-204ENST00000412061 TP53BP2Q13625 1128 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 PUM1Q14671 1186 aaKnown RBP eCLIP4.86□□□□□ -1.63
BRCA1-204ENST00000412061 CDSNQ15517 529 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 TEDDM1Q5T9Z0 273 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 LIPMQ5VYY2 423 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 ABLIM2Q6H8Q1 611 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 DGAT2L7PQ6IED9 249 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 GPR149Q86SP6 731 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 DTX2Q86UW9 622 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 RAB11FIP4Q86YS3 637 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 ARHGEF19Q8IW93 802 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 IZUMO1Q8IYV9 350 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 WDTC1Q8N5D0 677 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 NAT8LQ8N9F0 302 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 FAM71DQ8N9W8 422 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 MBD3L2Q8NHZ7 208 aaPredicted RBP4.86□□□□□ -1.63
BRCA1-204ENST00000412061 SCFD2Q8WU76 684 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 ZNF764Q96H86 408 aaPredicted RBP4.86□□□□□ -1.63
BRCA1-204ENST00000412061 ZBTB45Q96K62 511 aaPredicted RBP4.86□□□□□ -1.63
BRCA1-204ENST00000412061 TSPAN18Q96SJ8 248 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 GPR20Q99678 358 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 C17orf80Q9BSJ5 609 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 MECRQ9BV79 373 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 KRTAP3-1Q9BYR8 98 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 RANBP17Q9H2T7 1088 aaKnown RBP4.86□□□□□ -1.63
BRCA1-204ENST00000412061 NDST4Q9H3R1 872 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 SMARCAD1Q9H4L7 1026 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 ZDHHC7Q9NXF8 308 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 TESQ9UGI8 421 aaKnown RBP4.86□□□□□ -1.63
BRCA1-204ENST00000412061 BAG5Q9UL15 447 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 USP22Q9UPT9 525 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 ABCC9O60706 1549 aa4.86□□□□□ -1.63
BRCA1-204ENST00000412061 A0A1W2PQ09 198 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 NPIPB15A6NHN6 443 aaPredicted RBP4.85□□□□□ -1.63
BRCA1-204ENST00000412061 ADM5C9JUS6 153 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 H0Y626 953 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 SLC16A3O15427 465 aaKnown RBP4.85□□□□□ -1.63
BRCA1-204ENST00000412061 LPXNO60711 386 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 TULP3O75386 442 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 CCNDBP1O95273 360 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 IGHDP01880 384 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 C1SP09871 688 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 RBL1P28749 1068 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 ATP5DP30049 168 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 HNRNPMP52272 730 aaKnown RBP eCLIP4.85□□□□□ -1.63
BRCA1-204ENST00000412061 ZNF131P52739 623 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 PPP5CP53041 499 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 PTP4A2Q12974 167 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 COG2Q14746 738 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 SF3B3Q15393 1217 aaKnown RBP4.85□□□□□ -1.63
BRCA1-204ENST00000412061 LRRC24Q50LG9 513 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 CYP20A1Q6UW02 462 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 SLFN11Q7Z7L1 901 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 EPHX4Q8IUS5 362 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 ULK2Q8IYT8 1036 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 SCML4Q8N228 414 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 LNX2Q8N448 690 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.85□□□□□ -1.63
BRCA1-204ENST00000412061 Q8NFD4 153 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms