RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 FAM50BQ9Y247 325 aa20.85■□□□□ 0.93
PTPA-208ENST00000411917 DOCK6Q96HP0 2047 aa20.85■□□□□ 0.93
PTPA-208ENST00000411917 GOLGA6L10A0A0M3HER8 536 aa20.84■□□□□ 0.93
PTPA-208ENST00000411917 ANHXE9PGG2 379 aa20.84■□□□□ 0.93
PTPA-208ENST00000411917 CCDC188H7C350 402 aa20.84■□□□□ 0.93
PTPA-208ENST00000411917 NCAM2O15394 837 aa20.84■□□□□ 0.93
PTPA-208ENST00000411917 CREB3O43889 395 aa20.84■□□□□ 0.93
PTPA-208ENST00000411917 CLDN11O75508 207 aa20.84■□□□□ 0.93
PTPA-208ENST00000411917 IRF1P10914 325 aa20.84■□□□□ 0.93
PTPA-208ENST00000411917 CDH4P55283 916 aa20.84■□□□□ 0.93
PTPA-208ENST00000411917 ZNF33AQ06730 810 aa20.84■□□□□ 0.93
PTPA-208ENST00000411917 SMAD2Q15796 467 aaKnown RBP20.84■□□□□ 0.93
PTPA-208ENST00000411917 LONRF2Q1L5Z9 754 aa20.84■□□□□ 0.93
PTPA-208ENST00000411917 RAP1GAP2Q684P5 730 aa20.84■□□□□ 0.93
PTPA-208ENST00000411917 PLD5Q8N7P1 536 aa20.84■□□□□ 0.93
PTPA-208ENST00000411917 HJURPQ8NCD3 748 aaPredicted RBP20.84■□□□□ 0.93
PTPA-208ENST00000411917 OSCP1Q8WVF1 389 aa20.84■□□□□ 0.93
PTPA-208ENST00000411917 BRD8Q9H0E9 1235 aa20.84■□□□□ 0.93
PTPA-208ENST00000411917 A0A1B0GVM2 712 aa20.83■□□□□ 0.93
PTPA-208ENST00000411917 TYW5A2RUC4 315 aaKnown RBP20.83■□□□□ 0.93
PTPA-208ENST00000411917 GRXCR2A6NFK2 248 aa20.83■□□□□ 0.93
PTPA-208ENST00000411917 TCAF2A6NFQ2 919 aa20.83■□□□□ 0.93
PTPA-208ENST00000411917 CST8O60676 142 aa20.83■□□□□ 0.93
PTPA-208ENST00000411917 ERCC2P18074 760 aa20.83■□□□□ 0.93
PTPA-208ENST00000411917 KCNA5P22460 613 aa20.83■□□□□ 0.93
PTPA-208ENST00000411917 SLC6A4P31645 630 aa20.83■□□□□ 0.93
PTPA-208ENST00000411917 MMRN1Q13201 1228 aa20.83■□□□□ 0.93
PTPA-208ENST00000411917 PDGFRLQ15198 375 aa20.83■□□□□ 0.93
PTPA-208ENST00000411917 SIX1Q15475 284 aaPredicted RBP20.83■□□□□ 0.93
PTPA-208ENST00000411917 CCNG2Q16589 344 aa20.83■□□□□ 0.93
PTPA-208ENST00000411917 MPPE1Q53F39 396 aa20.83■□□□□ 0.93
PTPA-208ENST00000411917 TMCO3Q6UWJ1 677 aa20.83■□□□□ 0.93
PTPA-208ENST00000411917 ZNF783Q6ZMS7 281 aa20.83■□□□□ 0.93
PTPA-208ENST00000411917 EP400NLQ6ZTU2 488 aa20.83■□□□□ 0.93
PTPA-208ENST00000411917 C14orf80Q86SX3 495 aa20.83■□□□□ 0.93
PTPA-208ENST00000411917 RFX6Q8HWS3 928 aa20.83■□□□□ 0.93
PTPA-208ENST00000411917 MFSD6LQ8IWD5 586 aa20.83■□□□□ 0.93
PTPA-208ENST00000411917 BBS7Q8IWZ6 715 aa20.83■□□□□ 0.93
PTPA-208ENST00000411917 UMODL1-AS1Q8N2C9 162 aa20.83■□□□□ 0.93
PTPA-208ENST00000411917 PLCD3Q8N3E9 789 aa20.83■□□□□ 0.93
PTPA-208ENST00000411917 PRICKLE1Q96MT3 831 aaPredicted RBP20.83■□□□□ 0.93
PTPA-208ENST00000411917 RUNDC3BQ96NL0 473 aa20.83■□□□□ 0.93
PTPA-208ENST00000411917 RPRD1AQ96P16 312 aaPredicted RBP20.83■□□□□ 0.93
PTPA-208ENST00000411917 THG1LQ9NWX6 298 aaKnown RBP20.83■□□□□ 0.93
PTPA-208ENST00000411917 VANGL2Q9ULK5 521 aa20.83■□□□□ 0.93
PTPA-208ENST00000411917 REV3LO60673 3130 aa20.82■□□□□ 0.92
PTPA-208ENST00000411917 CXorf51AA0A1B0GTR3 108 aa20.82■□□□□ 0.92
PTPA-208ENST00000411917 DAPK3O43293 454 aa20.82■□□□□ 0.92
PTPA-208ENST00000411917 KRT10P13645 584 aa20.82■□□□□ 0.92
PTPA-208ENST00000411917 NDST2P52849 883 aa20.82■□□□□ 0.92
PTPA-208ENST00000411917 OXCT1P55809 520 aa20.82■□□□□ 0.92
PTPA-208ENST00000411917 TUBB4BP68371 445 aa20.82■□□□□ 0.92
PTPA-208ENST00000411917 XRCC4Q13426 336 aa20.82■□□□□ 0.92
PTPA-208ENST00000411917 AFMIDQ63HM1 303 aa20.82■□□□□ 0.92
PTPA-208ENST00000411917 NCBP2-AS2Q69YL0 99 aa20.82■□□□□ 0.92
PTPA-208ENST00000411917 AADACL2Q6P093 401 aa20.82■□□□□ 0.92
PTPA-208ENST00000411917 SETD3Q86TU7 594 aaPredicted RBP20.82■□□□□ 0.92
PTPA-208ENST00000411917 RIN3Q8TB24 985 aa20.82■□□□□ 0.92
PTPA-208ENST00000411917 MS4A14Q96JA4 679 aa20.82■□□□□ 0.92
PTPA-208ENST00000411917 HERPUD2Q9BSE4 406 aa20.82■□□□□ 0.92
PTPA-208ENST00000411917 PHF7Q9BWX1 381 aaPredicted RBP20.82■□□□□ 0.92
PTPA-208ENST00000411917 MAGEB5Q9BZ81 275 aa20.82■□□□□ 0.92
PTPA-208ENST00000411917 SMG9Q9H0W8 520 aaKnown RBP20.82■□□□□ 0.92
PTPA-208ENST00000411917 LRRC19Q9H756 370 aa20.82■□□□□ 0.92
PTPA-208ENST00000411917 RRAGDQ9NQL2 400 aaPredicted RBP20.82■□□□□ 0.92
PTPA-208ENST00000411917 CDH22Q9UJ99 828 aa20.82■□□□□ 0.92
PTPA-208ENST00000411917 TBC1D30Q9Y2I9 924 aa20.82■□□□□ 0.92
PTPA-208ENST00000411917 NR2E1Q9Y466 385 aa20.82■□□□□ 0.92
PTPA-208ENST00000411917 BRWD1Q9NSI6 2320 aa20.81■□□□□ 0.92
PTPA-208ENST00000411917 HEPACAM2A8MVW5 462 aa20.81■□□□□ 0.92
PTPA-208ENST00000411917 H3BQ06 376 aaPredicted RBP20.81■□□□□ 0.92
PTPA-208ENST00000411917 PENKP01210 267 aaPredicted RBP20.81■□□□□ 0.92
PTPA-208ENST00000411917 CYBBP04839 570 aa20.81■□□□□ 0.92
PTPA-208ENST00000411917 MX2P20592 715 aa20.81■□□□□ 0.92
PTPA-208ENST00000411917 GBP2P32456 591 aaPredicted RBP20.81■□□□□ 0.92
PTPA-208ENST00000411917 FNTAP49354 379 aa20.81■□□□□ 0.92
PTPA-208ENST00000411917 YBEYP58557 167 aaPredicted RBP20.81■□□□□ 0.92
PTPA-208ENST00000411917 ZDHHC14Q8IZN3 488 aa20.81■□□□□ 0.92
PTPA-208ENST00000411917 ADGRG2Q8IZP9 1017 aa20.81■□□□□ 0.92
PTPA-208ENST00000411917 LGI2Q8N0V4 545 aa20.81■□□□□ 0.92
PTPA-208ENST00000411917 TDRD5Q8NAT2 981 aaKnown RBP20.81■□□□□ 0.92
PTPA-208ENST00000411917 FATE1Q969F0 183 aa20.81■□□□□ 0.92
PTPA-208ENST00000411917 IGSF8Q969P0 613 aa20.81■□□□□ 0.92
PTPA-208ENST00000411917 TMA16Q96EY4 203 aaKnown RBP20.81■□□□□ 0.92
PTPA-208ENST00000411917 OLFM3Q96PB7 478 aa20.81■□□□□ 0.92
PTPA-208ENST00000411917 HEMGNQ9BXL5 484 aa20.81■□□□□ 0.92
PTPA-208ENST00000411917 KLC2Q9H0B6 622 aa20.81■□□□□ 0.92
PTPA-208ENST00000411917 KIF26AQ9ULI4 1882 aaPredicted RBP20.81■□□□□ 0.92
PTPA-208ENST00000411917 GOLGA6L7A0A1B0GV03 622 aa20.8■□□□□ 0.92
PTPA-208ENST00000411917 HACD1B0YJ81 288 aa20.8■□□□□ 0.92
PTPA-208ENST00000411917 PDE2AO00408 941 aaPredicted RBP20.8■□□□□ 0.92
PTPA-208ENST00000411917 KRIT1O00522 736 aa20.8■□□□□ 0.92
PTPA-208ENST00000411917 AMPD1P23109 780 aa20.8■□□□□ 0.92
PTPA-208ENST00000411917 ADCY2Q08462 1091 aa20.8■□□□□ 0.92
PTPA-208ENST00000411917 NOMO1Q15155 1222 aa20.8■□□□□ 0.92
PTPA-208ENST00000411917 RWDD4Q6NW29 188 aaKnown RBP20.8■□□□□ 0.92
PTPA-208ENST00000411917 PRELID2Q8N945 189 aa20.8■□□□□ 0.92
PTPA-208ENST00000411917 SPATA4Q8NEY3 305 aa20.8■□□□□ 0.92
PTPA-208ENST00000411917 P3H4Q92791 437 aa20.8■□□□□ 0.92
PTPA-208ENST00000411917 ATP2A3Q93084 1043 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms