RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 CFAP52Q8N1V2 620 aa17.14■□□□□ 0.33
SUMO1-208ENST00000409627 TTC8Q8TAM2 541 aa17.14■□□□□ 0.33
SUMO1-208ENST00000409627 XPO6Q96QU8 1125 aaKnown RBP17.14■□□□□ 0.33
SUMO1-208ENST00000409627 ZYG11BQ9C0D3 744 aa17.14■□□□□ 0.33
SUMO1-208ENST00000409627 PCDH18Q9HCL0 1135 aa17.14■□□□□ 0.33
SUMO1-208ENST00000409627 RCOR3Q9P2K3 495 aaPredicted RBP17.14■□□□□ 0.33
SUMO1-208ENST00000409627 WNT16Q9UBV4 365 aa17.14■□□□□ 0.33
SUMO1-208ENST00000409627 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.14■□□□□ 0.33
SUMO1-208ENST00000409627 PCDHA3Q9Y5H8 950 aa17.14■□□□□ 0.33
SUMO1-208ENST00000409627 UNC80Q8N2C7 3258 aa17.13■□□□□ 0.33
SUMO1-208ENST00000409627 MIF4GDA9UHW6 222 aaKnown RBP17.13■□□□□ 0.33
SUMO1-208ENST00000409627 H3BRJ5 948 aa17.13■□□□□ 0.33
SUMO1-208ENST00000409627 EEF2KO00418 725 aaKnown RBP17.13■□□□□ 0.33
SUMO1-208ENST00000409627 CLDN11O75508 207 aa17.13■□□□□ 0.33
SUMO1-208ENST00000409627 LUC7L3O95232 432 aaKnown RBP17.13■□□□□ 0.33
SUMO1-208ENST00000409627 FTCDO95954 541 aa17.13■□□□□ 0.33
SUMO1-208ENST00000409627 TNNT1P13805 278 aa17.13■□□□□ 0.33
SUMO1-208ENST00000409627 CTHP32929 405 aa17.13■□□□□ 0.33
SUMO1-208ENST00000409627 HCAR3P49019 387 aa17.13■□□□□ 0.33
SUMO1-208ENST00000409627 IRAK1P51617 712 aa17.13■□□□□ 0.33
SUMO1-208ENST00000409627 CDH4P55283 916 aa17.13■□□□□ 0.33
SUMO1-208ENST00000409627 CDH6P55285 790 aa17.13■□□□□ 0.33
SUMO1-208ENST00000409627 TPI1P60174 286 aa17.13■□□□□ 0.33
SUMO1-208ENST00000409627 KRT81Q14533 505 aa17.13■□□□□ 0.33
SUMO1-208ENST00000409627 ALFQ53S48 1182 aa17.13■□□□□ 0.33
SUMO1-208ENST00000409627 C1orf228Q6PIY5 440 aa17.13■□□□□ 0.33
SUMO1-208ENST00000409627 RALGPS2Q86X27 583 aaPredicted RBP17.13■□□□□ 0.33
SUMO1-208ENST00000409627 VSIG1Q86XK7 387 aa17.13■□□□□ 0.33
SUMO1-208ENST00000409627 MAP7D3Q8IWC1 876 aa17.13■□□□□ 0.33
SUMO1-208ENST00000409627 KATNAL2Q8IYT4 538 aa17.13■□□□□ 0.33
SUMO1-208ENST00000409627 ZNF557Q8N988 423 aaPredicted RBP17.13■□□□□ 0.33
SUMO1-208ENST00000409627 KCTD6Q8NC69 237 aa17.13■□□□□ 0.33
SUMO1-208ENST00000409627 TSC1Q92574 1164 aa17.13■□□□□ 0.33
SUMO1-208ENST00000409627 BHMTQ93088 406 aa17.13■□□□□ 0.33
SUMO1-208ENST00000409627 CHFRQ96EP1 664 aa17.13■□□□□ 0.33
SUMO1-208ENST00000409627 SLC2A11Q9BYW1 496 aa17.13■□□□□ 0.33
SUMO1-208ENST00000409627 HEBP1Q9NRV9 189 aa17.13■□□□□ 0.33
SUMO1-208ENST00000409627 PLK2Q9NYY3 685 aa17.13■□□□□ 0.33
SUMO1-208ENST00000409627 STIM2Q9P246 746 aa17.13■□□□□ 0.33
SUMO1-208ENST00000409627 FBXO10Q9UK96 956 aa17.13■□□□□ 0.33
SUMO1-208ENST00000409627 ZKSCAN5Q9Y2L8 839 aa17.13■□□□□ 0.33
SUMO1-208ENST00000409627 PIAS3Q9Y6X2 628 aa17.13■□□□□ 0.33
SUMO1-208ENST00000409627 ZNF487B1APH4 448 aa17.12■□□□□ 0.33
SUMO1-208ENST00000409627 SPECC1L-ADORA2AF8WAN1 911 aa17.12■□□□□ 0.33
SUMO1-208ENST00000409627 FGF10O15520 208 aaPredicted RBP17.12■□□□□ 0.33
SUMO1-208ENST00000409627 KIF5CO60282 957 aa17.12■□□□□ 0.33
SUMO1-208ENST00000409627 CNTN5O94779 1100 aa17.12■□□□□ 0.33
SUMO1-208ENST00000409627 KRT1P04264 644 aa17.12■□□□□ 0.33
SUMO1-208ENST00000409627 RHOQP17081 205 aa17.12■□□□□ 0.33
SUMO1-208ENST00000409627 GOT1P17174 413 aa17.12■□□□□ 0.33
SUMO1-208ENST00000409627 EPHB2P29323 1055 aa17.12■□□□□ 0.33
SUMO1-208ENST00000409627 ARL4AP40617 200 aa17.12■□□□□ 0.33
SUMO1-208ENST00000409627 OPRD1P41143 372 aa17.12■□□□□ 0.33
SUMO1-208ENST00000409627 SOX9P48436 509 aa17.12■□□□□ 0.33
SUMO1-208ENST00000409627 MARCKSL1P49006 195 aa17.12■□□□□ 0.33
SUMO1-208ENST00000409627 PRKCQQ04759 706 aa17.12■□□□□ 0.33
SUMO1-208ENST00000409627 DPYSL3Q14195 570 aa17.12■□□□□ 0.33
SUMO1-208ENST00000409627 MLF2Q15773 248 aaPredicted RBP17.12■□□□□ 0.33
SUMO1-208ENST00000409627 SLC44A4Q53GD3 710 aa17.12■□□□□ 0.33
SUMO1-208ENST00000409627 ZFYVE27Q5T4F4 411 aa17.12■□□□□ 0.33
SUMO1-208ENST00000409627 RWDD4Q6NW29 188 aaKnown RBP17.12■□□□□ 0.33
SUMO1-208ENST00000409627 RFX8Q6ZV50 586 aa17.12■□□□□ 0.33
SUMO1-208ENST00000409627 C12orf40Q86WS4 652 aa17.12■□□□□ 0.33
SUMO1-208ENST00000409627 CIR1Q86X95 450 aaPredicted RBP17.12■□□□□ 0.33
SUMO1-208ENST00000409627 RAPGEF5Q92565 580 aa17.12■□□□□ 0.33
SUMO1-208ENST00000409627 KRT35Q92764 455 aa17.12■□□□□ 0.33
SUMO1-208ENST00000409627 HES6Q96HZ4 224 aa17.12■□□□□ 0.33
SUMO1-208ENST00000409627 ZNF670Q9BS34 389 aa17.12■□□□□ 0.33
SUMO1-208ENST00000409627 CATSPERBQ9H7T0 1116 aa17.12■□□□□ 0.33
SUMO1-208ENST00000409627 KLHL11Q9NVR0 708 aa17.12■□□□□ 0.33
SUMO1-208ENST00000409627 MPP6Q9NZW5 540 aa17.12■□□□□ 0.33
SUMO1-208ENST00000409627 CWC15Q9P013 229 aaKnown RBP17.12■□□□□ 0.33
SUMO1-208ENST00000409627 ZNF212Q9UDV6 495 aa17.12■□□□□ 0.33
SUMO1-208ENST00000409627 CHD5Q8TDI0 1954 aa17.11■□□□□ 0.33
SUMO1-208ENST00000409627 LRRD1A4D1F6 860 aa17.11■□□□□ 0.33
SUMO1-208ENST00000409627 WASH4PA8MWX3 477 aa17.11■□□□□ 0.33
SUMO1-208ENST00000409627 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.11■□□□□ 0.33
SUMO1-208ENST00000409627 TULP3O75386 442 aa17.11■□□□□ 0.33
SUMO1-208ENST00000409627 CD48P09326 243 aa17.11■□□□□ 0.33
SUMO1-208ENST00000409627 KDELR1P24390 212 aa17.11■□□□□ 0.33
SUMO1-208ENST00000409627 MSNP26038 577 aaKnown RBP17.11■□□□□ 0.33
SUMO1-208ENST00000409627 PEX5P50542 639 aa17.11■□□□□ 0.33
SUMO1-208ENST00000409627 ZXDAP98168 799 aa17.11■□□□□ 0.33
SUMO1-208ENST00000409627 CDH18Q13634 790 aa17.11■□□□□ 0.33
SUMO1-208ENST00000409627 DPYSQ14117 519 aa17.11■□□□□ 0.33
SUMO1-208ENST00000409627 ODF2Q5BJF6 829 aa17.11■□□□□ 0.33
SUMO1-208ENST00000409627 IER5LQ5T953 404 aa17.11■□□□□ 0.33
SUMO1-208ENST00000409627 MEI1Q5TIA1 1274 aa17.11■□□□□ 0.33
SUMO1-208ENST00000409627 NLRP14Q86W24 1093 aa17.11■□□□□ 0.33
SUMO1-208ENST00000409627 MFN1Q8IWA4 741 aa17.11■□□□□ 0.33
SUMO1-208ENST00000409627 CCDC117Q8IWD4 279 aaPredicted RBP17.11■□□□□ 0.33
SUMO1-208ENST00000409627 CARNMT1Q8N4J0 409 aa17.11■□□□□ 0.33
SUMO1-208ENST00000409627 UBL4BQ8N7F7 174 aa17.11■□□□□ 0.33
SUMO1-208ENST00000409627 NAT16Q8N8M0 369 aa17.11■□□□□ 0.33
SUMO1-208ENST00000409627 EXD1Q8NHP7 514 aa17.11■□□□□ 0.33
SUMO1-208ENST00000409627 FIBINQ8TAL6 211 aa17.11■□□□□ 0.33
SUMO1-208ENST00000409627 EXOC4Q96A65 974 aa17.11■□□□□ 0.33
SUMO1-208ENST00000409627 FAF2Q96CS3 445 aa17.11■□□□□ 0.33
SUMO1-208ENST00000409627 CSPG4P5Q96PW8 444 aa17.11■□□□□ 0.33
SUMO1-208ENST00000409627 ARHGEF3Q9NR81 526 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms