RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 SNIP1Q8TAD8 396 aaKnown RBP17.57■□□□□ 0.4
SCRN1-203ENST00000409570 TTC17Q96AE7 1141 aa17.57■□□□□ 0.4
SCRN1-203ENST00000409570 SKA1Q96BD8 255 aa17.57■□□□□ 0.4
SCRN1-203ENST00000409570 FCRL3Q96P31 734 aaPredicted RBP17.57■□□□□ 0.4
SCRN1-203ENST00000409570 NEUROG2Q9H2A3 272 aa17.57■□□□□ 0.4
SCRN1-203ENST00000409570 LRRC4Q9HBW1 653 aa17.57■□□□□ 0.4
SCRN1-203ENST00000409570 INTS6Q9UL03 887 aaKnown RBP17.57■□□□□ 0.4
SCRN1-203ENST00000409570 MID1O15344 667 aa17.56■□□□□ 0.4
SCRN1-203ENST00000409570 YKT6O15498 198 aa17.56■□□□□ 0.4
SCRN1-203ENST00000409570 RRP8O43159 456 aaKnown RBP17.56■□□□□ 0.4
SCRN1-203ENST00000409570 PLA2G2AP14555 144 aa17.56■□□□□ 0.4
SCRN1-203ENST00000409570 EPHA8P29322 1005 aaPredicted RBP17.56■□□□□ 0.4
SCRN1-203ENST00000409570 GTF2H1P32780 548 aa17.56■□□□□ 0.4
SCRN1-203ENST00000409570 CST6Q15828 149 aa17.56■□□□□ 0.4
SCRN1-203ENST00000409570 HNRNPA1L2Q32P51 320 aaKnown RBP17.56■□□□□ 0.4
SCRN1-203ENST00000409570 FAM133BQ5BKY9 247 aaKnown RBP17.56■□□□□ 0.4
SCRN1-203ENST00000409570 MSANTD2Q6P1R3 559 aa17.56■□□□□ 0.4
SCRN1-203ENST00000409570 DHX40Q8IX18 779 aaKnown RBP17.56■□□□□ 0.4
SCRN1-203ENST00000409570 OR2T34Q8NGX1 318 aa17.56■□□□□ 0.4
SCRN1-203ENST00000409570 MRGPRX3Q96LB0 322 aa17.56■□□□□ 0.4
SCRN1-203ENST00000409570 IRX2Q9BZI1 471 aaPredicted RBP17.56■□□□□ 0.4
SCRN1-203ENST00000409570 GDF3Q9NR23 364 aa17.56■□□□□ 0.4
SCRN1-203ENST00000409570 AASDHPPTQ9NRN7 309 aa17.56■□□□□ 0.4
SCRN1-203ENST00000409570 ABCC13Q9NSE7 274 aa17.56■□□□□ 0.4
SCRN1-203ENST00000409570 ADAMTS1Q9UHI8 967 aa17.56■□□□□ 0.4
SCRN1-203ENST00000409570 TSPAN16Q9UKR8 245 aa17.56■□□□□ 0.4
SCRN1-203ENST00000409570 LRRC72A6NJI9 287 aa17.55■□□□□ 0.4
SCRN1-203ENST00000409570 IGLV3-27P01718 113 aa17.55■□□□□ 0.4
SCRN1-203ENST00000409570 PSMC2P35998 433 aaKnown RBP17.55■□□□□ 0.4
SCRN1-203ENST00000409570 CSKP41240 450 aa17.55■□□□□ 0.4
SCRN1-203ENST00000409570 CCR5P51681 352 aa17.55■□□□□ 0.4
SCRN1-203ENST00000409570 ST8SIA6P61647 398 aa17.55■□□□□ 0.4
SCRN1-203ENST00000409570 BST2Q10589 180 aaKnown RBP17.55■□□□□ 0.4
SCRN1-203ENST00000409570 BNIP3Q12983 259 aa17.55■□□□□ 0.4
SCRN1-203ENST00000409570 C9orf64Q5T6V5 341 aa17.55■□□□□ 0.4
SCRN1-203ENST00000409570 MMAAQ8IVH4 418 aaKnown RBP17.55■□□□□ 0.4
SCRN1-203ENST00000409570 ZNF843Q8N446 348 aa17.55■□□□□ 0.4
SCRN1-203ENST00000409570 FBXL13Q8NEE6 735 aa17.55■□□□□ 0.4
SCRN1-203ENST00000409570 FIBINQ8TAL6 211 aa17.55■□□□□ 0.4
SCRN1-203ENST00000409570 BAP1Q92560 729 aa17.55■□□□□ 0.4
SCRN1-203ENST00000409570 IPO9Q96P70 1041 aaKnown RBP17.55■□□□□ 0.4
SCRN1-203ENST00000409570 RAB20Q9NX57 234 aa17.55■□□□□ 0.4
SCRN1-203ENST00000409570 STIM2Q9P246 746 aa17.55■□□□□ 0.4
SCRN1-203ENST00000409570 FZD4Q9ULV1 537 aa17.55■□□□□ 0.4
SCRN1-203ENST00000409570 ACSL4O60488 711 aa17.54■□□□□ 0.4
SCRN1-203ENST00000409570 RNASEH1O60930 286 aaKnown RBP17.54■□□□□ 0.4
SCRN1-203ENST00000409570 RNASEH2AO75792 299 aaKnown RBP17.54■□□□□ 0.4
SCRN1-203ENST00000409570 ASLP04424 464 aa17.54■□□□□ 0.4
SCRN1-203ENST00000409570 MXI1P50539 228 aa17.54■□□□□ 0.4
SCRN1-203ENST00000409570 NXPH1P58417 271 aa17.54■□□□□ 0.4
SCRN1-203ENST00000409570 DAOAP59103 153 aa17.54■□□□□ 0.4
SCRN1-203ENST00000409570 SFSWAPQ12872 951 aaKnown RBP17.54■□□□□ 0.4
SCRN1-203ENST00000409570 ADAM9Q13443 819 aa17.54■□□□□ 0.4
SCRN1-203ENST00000409570 ARID5BQ14865 1188 aa17.54■□□□□ 0.4
SCRN1-203ENST00000409570 SFMBT2Q5VUG0 894 aa17.54■□□□□ 0.4
SCRN1-203ENST00000409570 NADSYN1Q6IA69 706 aa17.54■□□□□ 0.4
SCRN1-203ENST00000409570 KANSL1Q7Z3B3 1105 aa17.54■□□□□ 0.4
SCRN1-203ENST00000409570 MFN1Q8IWA4 741 aa17.54■□□□□ 0.4
SCRN1-203ENST00000409570 SCML4Q8N228 414 aa17.54■□□□□ 0.4
SCRN1-203ENST00000409570 UBA3Q8TBC4 463 aa17.54■□□□□ 0.4
SCRN1-203ENST00000409570 KCTD13Q8WZ19 329 aa17.54■□□□□ 0.4
SCRN1-203ENST00000409570 MYEOVQ96EZ4 313 aa17.54■□□□□ 0.4
SCRN1-203ENST00000409570 PRICKLE1Q96MT3 831 aaPredicted RBP17.54■□□□□ 0.4
SCRN1-203ENST00000409570 OMDQ99983 421 aa17.54■□□□□ 0.4
SCRN1-203ENST00000409570 MAPK8IP1Q9UQF2 711 aa17.54■□□□□ 0.4
SCRN1-203ENST00000409570 TLR4O00206 839 aa17.53■□□□□ 0.4
SCRN1-203ENST00000409570 IRAK2O43187 625 aa17.53■□□□□ 0.4
SCRN1-203ENST00000409570 BRINP1O60477 761 aa17.53■□□□□ 0.4
SCRN1-203ENST00000409570 MYL1P05976 194 aa17.53■□□□□ 0.4
SCRN1-203ENST00000409570 HSP90AA1P07900 732 aaKnown RBP17.53■□□□□ 0.4
SCRN1-203ENST00000409570 RPL13P26373 211 aaKnown RBP17.53■□□□□ 0.4
SCRN1-203ENST00000409570 SLC8A1P32418 973 aa17.53■□□□□ 0.4
SCRN1-203ENST00000409570 RXRGP48443 463 aa17.53■□□□□ 0.4
SCRN1-203ENST00000409570 ARRB1P49407 418 aaPredicted RBP17.53■□□□□ 0.4
SCRN1-203ENST00000409570 SGO2Q562F6 1265 aa17.53■□□□□ 0.4
SCRN1-203ENST00000409570 PCSK4Q6UW60 755 aa17.53■□□□□ 0.4
SCRN1-203ENST00000409570 GPR155Q7Z3F1 870 aa17.53■□□□□ 0.4
SCRN1-203ENST00000409570 ZNF605Q86T29 641 aa17.53■□□□□ 0.4
SCRN1-203ENST00000409570 UNC45BQ8IWX7 931 aa17.53■□□□□ 0.4
SCRN1-203ENST00000409570 SIX6OS1Q8N1H7 587 aa17.53■□□□□ 0.4
SCRN1-203ENST00000409570 CACTIN-AS1Q8N1I8 211 aa17.53■□□□□ 0.4
SCRN1-203ENST00000409570 AADATQ8N5Z0 425 aa17.53■□□□□ 0.4
SCRN1-203ENST00000409570 ZNF557Q8N988 423 aaPredicted RBP17.53■□□□□ 0.4
SCRN1-203ENST00000409570 KDM1BQ8NB78 822 aa17.53■□□□□ 0.4
SCRN1-203ENST00000409570 FGF11Q92914 225 aa17.53■□□□□ 0.4
SCRN1-203ENST00000409570 FAM129BQ96TA1 746 aa17.53■□□□□ 0.4
SCRN1-203ENST00000409570 ERVMER34-1Q9H9K5 563 aa17.53■□□□□ 0.4
SCRN1-203ENST00000409570 CNGB3Q9NQW8 809 aa17.53■□□□□ 0.4
SCRN1-203ENST00000409570 HESX1Q9UBX0 185 aa17.53■□□□□ 0.4
SCRN1-203ENST00000409570 ERVW-1Q9UQF0 538 aa17.53■□□□□ 0.4
SCRN1-203ENST00000409570 MAST4O15021 2626 aa17.53■□□□□ 0.4
SCRN1-203ENST00000409570 ITIH6Q6UXX5 1313 aa17.52■□□□□ 0.4
SCRN1-203ENST00000409570 TEX51A0A1B0GUA7 166 aa17.52■□□□□ 0.4
SCRN1-203ENST00000409570 TARSL2A2RTX5 802 aaKnown RBP17.52■□□□□ 0.4
SCRN1-203ENST00000409570 TTC34A8MYJ7 566 aa17.52■□□□□ 0.4
SCRN1-203ENST00000409570 GABBR2O75899 941 aa17.52■□□□□ 0.4
SCRN1-203ENST00000409570 RHOBTB3O94955 611 aa17.52■□□□□ 0.4
SCRN1-203ENST00000409570 F13A1P00488 732 aa17.52■□□□□ 0.4
SCRN1-203ENST00000409570 PRR29P0C7W0 189 aa17.52■□□□□ 0.4
SCRN1-203ENST00000409570 LCP1P13796 627 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms