RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 TREML2Q5T2D2 321 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 MFSD7Q6UXD7 560 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 CDT1Q9H211 546 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 ARMC7Q9H6L4 198 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 PARVBQ9HBI1 364 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 CTSEP14091 401 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 ELK3P41970 407 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 XRCC4Q13426 336 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 CAPSQ13938 189 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 DCLRE1AQ6PJP8 1040 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 MIER2Q8N344 545 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 LPPQ93052 612 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 NDOR1Q9UHB4 597 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 EIF4E1BA6NMX2 242 aaKnown RBP25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 TLL1O43897 1013 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 SNRPD1P62314 119 aaKnown RBP25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 KDM7AQ6ZMT4 941 aa25.59■■□□□ 1.69
SPIRE1-202ENST00000409402 KIF2BQ8N4N8 673 aa25.58■■□□□ 1.69
SPIRE1-202ENST00000409402 HSFY1Q96LI6 401 aa25.58■■□□□ 1.69
SPIRE1-202ENST00000409402 TRPC4Q9UBN4 977 aa25.58■■□□□ 1.69
SPIRE1-202ENST00000409402 OR12D3Q9UGF7 316 aa25.58■■□□□ 1.69
SPIRE1-202ENST00000409402 KANSL1LA0AUZ9 987 aa25.58■■□□□ 1.69
SPIRE1-202ENST00000409402 CCDC153Q494R4 210 aa25.58■■□□□ 1.69
SPIRE1-202ENST00000409402 LRRC23Q53EV4 343 aaPredicted RBP25.58■■□□□ 1.69
SPIRE1-202ENST00000409402 LLGL2Q6P1M3 1020 aa25.58■■□□□ 1.69
SPIRE1-202ENST00000409402 VAPBO95292 243 aa25.58■■□□□ 1.69
SPIRE1-202ENST00000409402 GRIK3Q13003 919 aa25.58■■□□□ 1.69
SPIRE1-202ENST00000409402 TRUB2O95900 331 aaKnown RBP25.58■■□□□ 1.68
SPIRE1-202ENST00000409402 PPP2R1BP30154 601 aa25.58■■□□□ 1.68
SPIRE1-202ENST00000409402 SKP1P63208 163 aa25.57■■□□□ 1.68
SPIRE1-202ENST00000409402 PWP1Q13610 501 aa25.57■■□□□ 1.68
SPIRE1-202ENST00000409402 WDR93Q6P2C0 686 aa25.57■■□□□ 1.68
SPIRE1-202ENST00000409402 ANKRD6Q9Y2G4 727 aa25.57■■□□□ 1.68
SPIRE1-202ENST00000409402 ARHGEF9O43307 516 aa25.57■■□□□ 1.68
SPIRE1-202ENST00000409402 RAP1GAP2Q684P5 730 aa25.57■■□□□ 1.68
SPIRE1-202ENST00000409402 STK40Q8N2I9 435 aa25.57■■□□□ 1.68
SPIRE1-202ENST00000409402 MAGEC3Q8TD91 643 aa25.57■■□□□ 1.68
SPIRE1-202ENST00000409402 PAWRQ96IZ0 340 aaKnown RBP25.57■■□□□ 1.68
SPIRE1-202ENST00000409402 A0A087X0B3 334 aa25.57■■□□□ 1.68
SPIRE1-202ENST00000409402 GLTPD2A6NH11 291 aa25.57■■□□□ 1.68
SPIRE1-202ENST00000409402 TCF3P15923 654 aa25.57■■□□□ 1.68
SPIRE1-202ENST00000409402 AQP5P55064 265 aa25.57■■□□□ 1.68
SPIRE1-202ENST00000409402 HLA-DQA1Q5Y7H0 255 aa25.57■■□□□ 1.68
SPIRE1-202ENST00000409402 TMEM161BQ8NDZ6 487 aa25.57■■□□□ 1.68
SPIRE1-202ENST00000409402 YIPF3Q9GZM5 350 aa25.57■■□□□ 1.68
SPIRE1-202ENST00000409402 C2CD2Q9Y426 696 aa25.57■■□□□ 1.68
SPIRE1-202ENST00000409402 NEURL4Q96JN8 1562 aa25.57■■□□□ 1.68
SPIRE1-202ENST00000409402 APOC4-APOC2K7ER74 178 aa25.57■■□□□ 1.68
SPIRE1-202ENST00000409402 APOC2P02655 101 aa25.57■■□□□ 1.68
SPIRE1-202ENST00000409402 MYLPFQ96A32 169 aa25.57■■□□□ 1.68
SPIRE1-202ENST00000409402 DDX3XO00571 662 aaKnown RBP eCLIP25.57■■□□□ 1.68
SPIRE1-202ENST00000409402 PSMD5Q16401 504 aa25.57■■□□□ 1.68
SPIRE1-202ENST00000409402 IYDQ6PHW0 289 aa25.57■■□□□ 1.68
SPIRE1-202ENST00000409402 PPTC7Q8NI37 304 aa25.57■■□□□ 1.68
SPIRE1-202ENST00000409402 VMP1Q96GC9 406 aa25.57■■□□□ 1.68
SPIRE1-202ENST00000409402 TSPAN18Q96SJ8 248 aa25.57■■□□□ 1.68
SPIRE1-202ENST00000409402 KATNA1O75449 491 aa25.56■■□□□ 1.68
SPIRE1-202ENST00000409402 ZC3H12AQ5D1E8 599 aaKnown RBP25.56■■□□□ 1.68
SPIRE1-202ENST00000409402 SPATA20Q8TB22 786 aa25.56■■□□□ 1.68
SPIRE1-202ENST00000409402 PHF21BQ96EK2 531 aa25.56■■□□□ 1.68
SPIRE1-202ENST00000409402 TMBIM4Q9HC24 238 aa25.56■■□□□ 1.68
SPIRE1-202ENST00000409402 KRT84Q9NSB2 600 aa25.56■■□□□ 1.68
SPIRE1-202ENST00000409402 ZBTB14O43829 449 aa25.56■■□□□ 1.68
SPIRE1-202ENST00000409402 TYMPP19971 482 aa25.56■■□□□ 1.68
SPIRE1-202ENST00000409402 FAM110CQ1W6H9 321 aa25.56■■□□□ 1.68
SPIRE1-202ENST00000409402 MAGED4Q96JG8 741 aa25.56■■□□□ 1.68
SPIRE1-202ENST00000409402 UNKQ9C0B0 810 aaKnown RBP25.56■■□□□ 1.68
SPIRE1-202ENST00000409402 KLHL28Q9NXS3 571 aa25.56■■□□□ 1.68
SPIRE1-202ENST00000409402 SNX8Q9Y5X2 465 aa25.56■■□□□ 1.68
SPIRE1-202ENST00000409402 MRPL42Q9Y6G3 142 aaKnown RBP25.56■■□□□ 1.68
SPIRE1-202ENST00000409402 DEAF1O75398 565 aaPredicted RBP25.56■■□□□ 1.68
SPIRE1-202ENST00000409402 USP1O94782 785 aa25.56■■□□□ 1.68
SPIRE1-202ENST00000409402 PYGMP11217 842 aa25.56■■□□□ 1.68
SPIRE1-202ENST00000409402 MAPK8P45983 427 aa25.56■■□□□ 1.68
SPIRE1-202ENST00000409402 IRAK1P51617 712 aa25.56■■□□□ 1.68
SPIRE1-202ENST00000409402 THAP11Q96EK4 314 aa25.56■■□□□ 1.68
SPIRE1-202ENST00000409402 ARHGEF28Q8N1W1 1705 aaKnown RBP25.56■■□□□ 1.68
SPIRE1-202ENST00000409402 C1QTNF3-AMACRE9PGA6 284 aa25.56■■□□□ 1.68
SPIRE1-202ENST00000409402 TPST1O60507 370 aa25.56■■□□□ 1.68
SPIRE1-202ENST00000409402 HOXB8P17481 243 aaPredicted RBP25.56■■□□□ 1.68
SPIRE1-202ENST00000409402 SKIV2L2P42285 1042 aaKnown RBP25.56■■□□□ 1.68
SPIRE1-202ENST00000409402 SERPINH1P50454 418 aaKnown RBP25.56■■□□□ 1.68
SPIRE1-202ENST00000409402 LRRC8DQ7L1W4 858 aa25.56■■□□□ 1.68
SPIRE1-202ENST00000409402 DPY30Q9C005 99 aa25.56■■□□□ 1.68
SPIRE1-202ENST00000409402 A8MX80 341 aa25.55■■□□□ 1.68
SPIRE1-202ENST00000409402 PEX5P50542 639 aa25.55■■□□□ 1.68
SPIRE1-202ENST00000409402 ZCCHC8Q6NZY4 707 aaKnown RBP25.55■■□□□ 1.68
SPIRE1-202ENST00000409402 BNC2Q6ZN30 1099 aaPredicted RBP25.55■■□□□ 1.68
SPIRE1-202ENST00000409402 NECAB2Q7Z6G3 386 aa25.55■■□□□ 1.68
SPIRE1-202ENST00000409402 HAS1Q92839 578 aa25.55■■□□□ 1.68
SPIRE1-202ENST00000409402 ERLEC1Q96DZ1 483 aa25.55■■□□□ 1.68
SPIRE1-202ENST00000409402 CCDC85CA6NKD9 419 aa25.55■■□□□ 1.68
SPIRE1-202ENST00000409402 UBDO15205 165 aa25.55■■□□□ 1.68
SPIRE1-202ENST00000409402 DLG4P78352 724 aa25.55■■□□□ 1.68
SPIRE1-202ENST00000409402 SCARA3Q6AZY7 606 aa25.55■■□□□ 1.68
SPIRE1-202ENST00000409402 TRAPPC5Q8IUR0 188 aa25.55■■□□□ 1.68
SPIRE1-202ENST00000409402 RPS7P62081 194 aaKnown RBP25.55■■□□□ 1.68
SPIRE1-202ENST00000409402 RRP1BQ14684 758 aaKnown RBP25.55■■□□□ 1.68
SPIRE1-202ENST00000409402 OR56A4Q8NGH8 313 aa25.55■■□□□ 1.68
SPIRE1-202ENST00000409402 GRIN3AQ8TCU5 1115 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms