RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 ZNF398Q8TD17 642 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 BLOC1S5Q8TDH9 187 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 TFAP2BQ92481 460 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 FOPNLQ96NB1 174 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 EBNA1BP2Q99848 306 aaKnown RBP4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 SH3GL2Q99962 352 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 MRPL1Q9BYD6 325 aaKnown RBP4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 BCO2Q9BYV7 579 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 RNF208Q9H0X6 261 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 PRDM12Q9H4Q4 367 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 GEMIN8Q9NWZ8 242 aaKnown RBP4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 SCOCQ9UIL1 159 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 ORC6Q9Y5N6 252 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 NRAPQ86VF7 1730 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 C2CD4BA6NLJ0 364 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 SYCE1LA8MT33 242 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 KCNK1O00180 336 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 SYN3O14994 580 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 ENO1P06733 434 aaKnown RBP4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 ASGR1P07306 291 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 KCNE1P15382 129 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 CES1P23141 567 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 CCND1P24385 295 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 OR1E1P30953 314 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 PPM1AP35813 382 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 PTGIRP43119 386 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 MMP13P45452 471 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 ATN1P54259 1190 aaPredicted RBP4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 LILRA4P59901 499 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 RHOAP61586 193 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 SLC12A1Q13621 1099 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 ITGA9Q13797 1035 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 PKN2Q16513 984 aaKnown RBP4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 RBBP7Q16576 425 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 USP41Q3LFD5 358 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 ZRANB3Q5FWF4 1079 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 HECTD3Q5T447 861 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 CCDC149Q6ZUS6 474 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 METTL3Q86U44 580 aaKnown RBP4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 KCNMB4Q86W47 210 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 UCMAQ8WVF2 138 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 CELF6Q96J87 481 aaKnown RBP4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 FIZ1Q96SL8 496 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 EIF2AQ9BY44 585 aaKnown RBP4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 VRTNQ9H8Y1 702 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 RXFP1Q9HBX9 757 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 ERVK-5Q9HDB9 667 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 DDX20Q9UHI6 824 aaKnown RBP4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 CRLS1Q9UJA2 301 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 SLC25A13Q9UJS0 675 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 PCDHA11Q9Y5I1 949 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 IGKV6-21A0A0C4DH24 114 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 CCDC78A2IDD5 438 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 WDR27A2RRH5 827 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 B2RBV5 119 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 GNGT2O14610 69 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 DDHD2O94830 711 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 SNUPNO95149 360 aaKnown RBP4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 CSPG5O95196 566 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 COL6A1P12109 1028 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 MAP4P27816 1152 aaKnown RBP4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 FLT3P36888 993 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 CASP2P42575 452 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 MAPK8P45983 427 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 NAA20P61599 178 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 FAAP100Q0VG06 881 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 STX5Q13190 355 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 KRT33BQ14525 404 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 KCNA10Q16322 511 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 TMC7Q7Z402 723 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 DEFB128Q7Z7B8 93 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 LONP2Q86WA8 852 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 LRRC43Q8N309 656 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 LMO3Q8TAP4 145 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 ADAM32Q8TC27 787 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 PLEKHO2Q8TD55 490 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 TCP10LQ8TDR4 215 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 TMEM174Q8WUU8 243 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 LPPQ93052 612 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 FAM84AQ96KN4 292 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 PCYT2Q99447 389 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 ZYG11BQ9C0D3 744 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 POLR1EQ9GZS1 481 aaKnown RBP4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 BCAS3Q9H6U6 928 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 THAP1Q9NVV9 213 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 ADA2Q9NZK5 511 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 NCKIPSDQ9NZQ3 722 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 HACD3Q9P035 362 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 CNTN3Q9P232 1028 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 HEY2Q9UBP5 337 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 UBA2Q9UBT2 640 aaPredicted RBP4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 DNMT3LQ9UJW3 386 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 VPS28Q9UK41 221 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 RUVBL2Q9Y230 463 aaKnown RBP4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 ARAP2Q8WZ64 1704 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 SUPT3HB4E1H0 165 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 ANGPT2O15123 496 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 SUPT3HO75486 399 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 RGS20O76081 388 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 SRP72O76094 671 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms