RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 VNN1O95497 513 aa5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 LATS1O95835 1130 aa5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 HNRNPCP07910 306 aaKnown RBP eCLIP5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 CD19P15391 556 aa5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 CHMP24386 653 aa5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 RAD52P43351 418 aa5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 GSTM5P46439 218 aa5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 NUCB1Q02818 461 aa5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 AAK1Q2M2I8 961 aa5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 CBWD5Q5RIA9 395 aa5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 CCDC144NLQ6NUI1 221 aa5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 Q6ZWC4 215 aa5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 TMTC3Q6ZXV5 915 aa5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 H1FNTQ75WM6 255 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 ARMC8Q8IUR7 673 aa5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 PTGR2Q8N8N7 351 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 FAM71DQ8N9W8 422 aa5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 HASPINQ8TF76 798 aa5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 HERC2P3Q9BVR0 1158 aa5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 RMI1Q9H9A7 625 aa5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 IL21RQ9HBE5 538 aa5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 GLOD4Q9HC38 313 aa5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 NSMCE4AQ9NXX6 385 aa5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 GPR34Q9UPC5 381 aa5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 RCE1Q9Y256 329 aa5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 UBE2J1Q9Y385 318 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 TTLL3Q9Y4R7 772 aa5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 PCDHB7Q9Y5E2 793 aa5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 COL3A1P02461 1466 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P13-201ENST00000406019 MBD3L5A6NJ08 208 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 A8MVJ9 347 aa5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 TARM1B6A8C7 271 aa5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 DOK2O60496 412 aa5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 TMCC2O75069 709 aa5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 F9P00740 461 aa5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 CYP2C18P33260 490 aa5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 PGM1P36871 562 aa5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 POLD2P49005 469 aa5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 CCR9P51686 369 aa5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 DRG2P55039 364 aaKnown RBP5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 EIF4A1P60842 406 aaKnown RBP5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 CYP4F2P78329 520 aa5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 RBM6P78332 1123 aaKnown RBP5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 MRPS21P82921 87 aaKnown RBP5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 GPR68Q15743 365 aa5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 PROSER3Q2NL68 480 aa5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 ZNF569Q5MCW4 686 aa5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 LIPMQ5VYY2 423 aa5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 R3HCC1LQ7Z5L2 792 aaKnown RBP5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 GALNT5Q7Z7M9 940 aa5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 CHD1LQ86WJ1 897 aa5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 OR8H2Q8N162 312 aa5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 FSIP1Q8NA03 581 aa5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 LSM14AQ8ND56 463 aaKnown RBP5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 LINS1Q8NG48 757 aa5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 CREB3L4Q8TEY5 395 aa5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 NPIPB3Q92617 1050 aa5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 WDYHV1Q96HA8 205 aa5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 REXO5Q96IC2 774 aaKnown RBP5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 MACROD1Q9BQ69 325 aa5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 ARHGAP39Q9C0H5 1083 aa5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 NKX1-2Q9UD57 310 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 BAG5Q9UL15 447 aa5.44□□□□□ -1.54
HMGB1P13-201ENST00000406019 MANSC4A6NHS7 340 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 LINC01548A6NM66 108 aa5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 TCERG1O14776 1098 aaKnown RBP5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 NKX2-8O15522 239 aa5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 HNRNPRO43390 633 aaKnown RBP5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 TMEM225BP0DP42 221 aa5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 CPA1P15085 419 aa5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 CHN1P15882 459 aa5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 DRD1P21728 446 aa5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 THBS4P35443 961 aa5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 MTHFSP49914 203 aa5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 DGKQP52824 942 aa5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 EEFSECP57772 596 aaKnown RBP5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 RPL15P61313 204 aaKnown RBP5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 SEMA3BQ13214 749 aa5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 ST3GAL2Q16842 350 aa5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 P3H1Q32P28 736 aa5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 GRHL2Q6ISB3 625 aa5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 KRTAP5-3Q6L8H2 238 aa5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 DENND1BQ6P3S1 775 aa5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 PDXDC1Q6P996 788 aa5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 INO80CQ6PI98 192 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 PTF1AQ7RTS3 328 aa5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 STAMQ92783 540 aa5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 CTHRC1Q96CG8 243 aa5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 APOPT1Q96IL0 206 aa5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 LENG8Q96PV6 779 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 PIGSQ96S52 555 aa5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 NPAS1Q99742 590 aa5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 LMAN2LQ9H0V9 348 aa5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 PRKRIP1Q9H875 184 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 FBXO28Q9NVF7 368 aa5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 ADAMTS5Q9UNA0 930 aa5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 NAALADL1Q9UQQ1 740 aa5.43□□□□□ -1.54
HMGB1P13-201ENST00000406019 H3BNC9 293 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms