RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	ARHGAP28	Q9P2N2	729 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	HSFX1	Q9UBD0	423 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	MAGEC2	Q9UBF1	373 aa	Predicted RBP	7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	UBQLN1	Q9UMX0	589 aa	Known RBP	7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	C2orf16	Q68DN1	1984 aa		7.27	□□□□□ -1.25
CEACAM1-208	ENST00000403461	DMXL1	Q9Y485	3027 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	MYOCOS	A0A1B0GUC4	107 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	TMEM8B	A6NDV4	472 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	KRIT1	O00522	736 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	CLDN3	O15551	220 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	EXTL3	O43909	919 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	MAFK	O60675	156 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	HIP1R	O75146	1068 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	TADA3	O75528	432 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	CLTA	P09496	248 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	OR4Q2	P0C623	313 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	CYP3A5	P20815	502 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	LRPAP1	P30533	357 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	IGFALS	P35858	605 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	RAP1GAP	P47736	663 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	PXN	P49023	591 aa	Predicted RBP	7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	ANAPC15	P60006	121 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	SMARCB1	Q12824	385 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	ZNF174	Q15697	407 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	CCDC6	Q16204	474 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	MGAT5B	Q3V5L5	792 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	TTC38	Q5R3I4	469 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	EGFLAM	Q63HQ2	1017 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	CENPP	Q6IPU0	288 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	UNQ6494/PRO21346	Q6UXR6	183 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	KBTBD6	Q86V97	674 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	METTL23	Q86XA0	190 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	TMC8	Q8IU68	726 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	NECAB1	Q8N987	351 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	PIP4K2C	Q8TBX8	421 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	PSMG2	Q969U7	264 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	RSPRY1	Q96DX4	576 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	ZFYVE19	Q96K21	471 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	C8orf76	Q96K31	380 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	TSPAN18	Q96SJ8	248 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	SLC38A3	Q99624	504 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	EDEM2	Q9BV94	578 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	KIF9	Q9HAQ2	790 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	TUBGCP4	Q9UGJ1	667 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	DSE	Q9UL01	958 aa		7.26	□□□□□ -1.25
CEACAM1-208	ENST00000403461	CACNA1I	Q9P0X4	2223 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	COL4A3	Q01955	1670 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	TEX51	A0A1B0GUA7	166 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	MTMR11	A4FU01	709 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	SLC16A4	O15374	487 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	SEMA7A	O75326	666 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	APBB3	O95704	486 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	CKM	P06732	381 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	CXCL8	P10145	99 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	PYGM	P11217	842 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	COL6A2	P12110	1019 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	DRD1	P21728	446 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	SCP2	P22307	547 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	PROZ	P22891	400 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	AARS	P49588	968 aa	Known RBP eCLIP	7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	LIG4	P49917	911 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	GYS2	P54840	703 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	CREB5	Q02930	508 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	MCL1	Q07820	350 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	RUNX3	Q13761	415 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	PDGFRL	Q15198	375 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	TMEM196	Q5HYL7	178 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	STXBP5	Q5T5C0	1151 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	MILR1	Q7Z6M3	343 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	CD302	Q8IX05	232 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	THEM5	Q8N1Q8	247 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	ATAD1	Q8NBU5	361 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	NSUN7	Q8NE18	718 aa	Known RBP	7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	PHOSPHO1	Q8TCT1	267 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	C2orf15	Q8WU43	125 aa	Known RBP	7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	ZC3H10	Q96K80	434 aa	Known RBP	7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	P2RY13	Q9BPV8	354 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	FOXP1	Q9H334	677 aa	Predicted RBP	7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	SMOC1	Q9H4F8	434 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	POLD4	Q9HCU8	107 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	CATSPERZ	Q9NTU4	200 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	TNPO3	Q9Y5L0	923 aa	Known RBP	7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	NCAN	O14594	1321 aa		7.25	□□□□□ -1.25
CEACAM1-208	ENST00000403461	DOCK8	Q8NF50	2099 aa		7.24	□□□□□ -1.25
CEACAM1-208	ENST00000403461	CACNA1G	O43497	2377 aa		7.24	□□□□□ -1.25
CEACAM1-208	ENST00000403461	CCDC66	A2RUB6	948 aa		7.24	□□□□□ -1.25
CEACAM1-208	ENST00000403461	TRDMT1	O14717	391 aa	Known RBP	7.24	□□□□□ -1.25
CEACAM1-208	ENST00000403461	OPA1	O60313	960 aa		7.24	□□□□□ -1.25
CEACAM1-208	ENST00000403461	JAK2	O60674	1132 aa		7.24	□□□□□ -1.25
CEACAM1-208	ENST00000403461	DTNB	O60941	627 aa		7.24	□□□□□ -1.25
CEACAM1-208	ENST00000403461	PRAMEF12	O95522	483 aa		7.24	□□□□□ -1.25
CEACAM1-208	ENST00000403461	CAVIN2	O95810	425 aa		7.24	□□□□□ -1.25
CEACAM1-208	ENST00000403461	RDX	P35241	583 aa	Known RBP	7.24	□□□□□ -1.25
CEACAM1-208	ENST00000403461	GUCY1B3	Q02153	619 aa		7.24	□□□□□ -1.25
CEACAM1-208	ENST00000403461	MESP2	Q0VG99	397 aa		7.24	□□□□□ -1.25
CEACAM1-208	ENST00000403461	PDIA5	Q14554	519 aa		7.24	□□□□□ -1.25
CEACAM1-208	ENST00000403461	ZRSR1	Q15695	479 aa	Known RBP	7.24	□□□□□ -1.25
CEACAM1-208	ENST00000403461	ME3	Q16798	604 aa		7.24	□□□□□ -1.25
CEACAM1-208	ENST00000403461	PLK5	Q496M5	336 aa		7.24	□□□□□ -1.25
CEACAM1-208	ENST00000403461	SLC39A12	Q504Y0	691 aa		7.24	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms