RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 STOX1Q6ZVD7 989 aa12.56□□□□□ -0.4
CACNA1C-219ENST00000399649 PLEKHH3Q7Z736 793 aa12.56□□□□□ -0.4
CACNA1C-219ENST00000399649 KCNMB4Q86W47 210 aa12.56□□□□□ -0.4
CACNA1C-219ENST00000399649 ZSCAN18Q8TBC5 510 aaPredicted RBP12.56□□□□□ -0.4
CACNA1C-219ENST00000399649 FRMD6Q96NE9 622 aa12.56□□□□□ -0.4
CACNA1C-219ENST00000399649 ERGIC2Q96RQ1 377 aa12.56□□□□□ -0.4
CACNA1C-219ENST00000399649 C9orf16Q9BUW7 83 aa12.56□□□□□ -0.4
CACNA1C-219ENST00000399649 KCNH1O95259 989 aa12.56□□□□□ -0.4
CACNA1C-219ENST00000399649 NPY2RP49146 381 aa12.56□□□□□ -0.4
CACNA1C-219ENST00000399649 POU6F1Q14863 301 aa12.56□□□□□ -0.4
CACNA1C-219ENST00000399649 MARC1Q5VT66 337 aa12.56□□□□□ -0.4
CACNA1C-219ENST00000399649 ESRP1Q6NXG1 681 aaKnown RBP12.56□□□□□ -0.4
CACNA1C-219ENST00000399649 PACS1Q6VY07 963 aa12.56□□□□□ -0.4
CACNA1C-219ENST00000399649 OR52L1Q8NGH7 329 aa12.56□□□□□ -0.4
CACNA1C-219ENST00000399649 F8VZ95 297 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 ALDH2P05091 517 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 C21orf59P57076 290 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 COPZ1P61923 177 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 NEK5Q6P3R8 708 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 ITFG1Q8TB96 612 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 MAP3K14Q99558 947 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 PAIP1Q9H074 479 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 CDC42EP4Q9H3Q1 356 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 POMKQ9H5K3 350 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 FBXL21Q9UKT6 434 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 A0A0A6YYK5 440 aaPredicted RBP12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 TNFAIP8O95379 198 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 RARGP13631 454 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 TGFBR2P37173 567 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 CCT3P49368 545 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 N4BP2L1Q5TBK1 243 aaPredicted RBP12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 DSG4Q86SJ6 1040 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 STX12Q86Y82 276 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 ARRDC4Q8NCT1 418 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 ATG4CQ96DT6 458 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 RNF145Q96MT1 663 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 FBXO44Q9H4M3 255 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 RBM22Q9NW64 420 aaKnown RBP eCLIP12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 MYRFQ9Y2G1 1151 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 DYTNA2CJ06 578 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 CASTOR2A6NHX0 329 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 PLEKP08567 350 aaPredicted RBP12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 SUPT20HL2P0C7V6 817 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 TBX4P57082 545 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 SRP54P61011 504 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 ZNHIT3Q15649 155 aaPredicted RBP12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 CBWD6Q4V339 395 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 PRAMEF18Q5VWM3 479 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 SYT12Q8IV01 421 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 ATP8B4Q8TF62 1192 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 PTPRHQ9HD43 1115 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 ITGA11Q9UKX5 1188 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 MROH7Q68CQ1 1323 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 PPP1R3GB7ZBB8 358 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 SERPINF2P08697 491 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 GMPSP49915 693 aaPredicted RBP12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 EPB41L4AQ9HCS5 686 aaPredicted RBP12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 ZNF232Q9UNY5 417 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 INVSQ9Y283 1065 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 LYVE1Q9Y5Y7 322 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 WDR27A2RRH5 827 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 CLOCKO15516 846 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 RPS12P25398 132 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 DNAJB2P25686 324 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 KLRC2P26717 231 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 ACADLP28330 430 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 TPP2P29144 1249 aaPredicted RBP12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 TOP3AQ13472 1001 aaPredicted RBP12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 PAGE2BQ5JRK9 111 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 FAM131BQ86XD5 332 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 COLGALT2Q8IYK4 626 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 PCSK9Q8NBP7 692 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 OR6Y1Q8NGX8 325 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 DPF3Q92784 378 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 PANX3Q96QZ0 392 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 TBCDQ9BTW9 1192 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 TAS2R13Q9NYV9 303 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 CHKBQ9Y259 395 aa12.55□□□□□ -0.4
CACNA1C-219ENST00000399649 ATP6V1G2O95670 118 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 RAG1P15918 1043 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 RASA1P20936 1047 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 ZNF621Q6ZSS3 439 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 ULK2Q8IYT8 1036 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 CYLDQ9NQC7 956 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 DDX43Q9NXZ2 648 aaKnown RBP12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 AP3M1Q9Y2T2 418 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 PCDHB5Q9Y5E4 795 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 COX7A2P14406 83 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 ETS1P14921 441 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 ARHGDIBP52566 201 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 MCL1Q07820 350 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 SPIRE1Q08AE8 756 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 CDH17Q12864 832 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 VPS72Q15906 364 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 WASHC2DQ5SRD0 308 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 QRFPRQ96P65 431 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 PLA2G12BQ9BX93 195 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 TMEM39BQ9GZU3 492 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 CYP3A43Q9HB55 503 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 KANSL3Q9P2N6 904 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms