RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 KDM7AQ6ZMT4 941 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 LRRC49Q8IUZ0 686 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 MTMR8Q96EF0 704 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 IL12RB2Q99665 862 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 TMEM60Q9H2L4 133 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 DMTF1Q9Y222 760 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 KLHL20Q9Y2M5 609 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 PTPRMP28827 1452 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 NEDD8-MDP1E9PL57 170 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 TFPIP10646 304 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 CCR1P32246 355 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 RPA3P35244 121 aaPredicted RBP11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 SPRP35270 261 aaPredicted RBP11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 DMWDQ09019 674 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 LRRC14Q15048 493 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 EFCAB3Q8N7B9 438 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 DPY30Q9C005 99 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 LY9Q9HBG7 655 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 IMPAD1Q9NX62 359 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 NR2E1Q9Y466 385 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 TRDMT1O14717 391 aaKnown RBP11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 ENO3P13929 434 aaPredicted RBP11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 COX7A2P14406 83 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 RGS1Q08116 209 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 MMRN1Q13201 1228 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 MAB21L3Q8N8X9 362 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 HCAR2Q8TDS4 363 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 STAMBPL1Q96FJ0 436 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 GOLPH3Q9H4A6 298 aa11.2□□□□□ -0.62
CACNA1C-216ENST00000399638 ANKDD1BA6NHY2 528 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 RAMP2O60895 175 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 FBXO21O94952 628 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 LCA5LO95447 670 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 UBTFL6P0CB48 400 aaPredicted RBP11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 MDH1P40925 334 aaKnown RBP11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 SLC1A1P43005 524 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 PPP2R2AP63151 447 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 PFKPQ01813 784 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 USP4Q13107 963 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 PLA2G4EQ3MJ16 856 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 ARL10Q8N8L6 244 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 SHCBP1LQ9BZQ2 653 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 ELOVL6Q9H5J4 265 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 CNTNAP4Q9C0A0 1308 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 SHPRHQ149N8 1683 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 GCATO75600 419 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 GLP2RO95838 553 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 MSL3P1P0C860 447 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 SERPINB1P30740 379 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 CASRP41180 1078 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 RPL21P46778 160 aaKnown RBP11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 NME5P56597 212 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 MAP2K5Q13163 448 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 RAB30Q15771 203 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 CYP2A13Q16696 494 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 KBTBD12Q3ZCT8 623 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 NOMO2Q5JPE7 1267 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 FAM171BQ6P995 826 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 ATP6V1C2Q8NEY4 427 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 OR14C36Q8NHC7 312 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 MRPL1Q9BYD6 325 aaKnown RBP11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 INTS7Q9NVH2 962 aaKnown RBP11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 CDH7Q9ULB5 785 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 SCN2BO60939 215 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 MMP14P50281 582 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 FPGSQ05932 587 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 ZNF57Q68EA5 555 aaPredicted RBP11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 CCDC137Q6PK04 289 aaKnown RBP11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 SLC27A6Q9Y2P4 619 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 PDS5AQ29RF7 1337 aaKnown RBP11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 NRKQ7Z2Y5 1582 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 PLGP00747 810 aaPredicted RBP11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 LAMTOR4Q0VGL1 99 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 MTA1Q13330 715 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 GLT6D1Q7Z4J2 308 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 SMARCD1Q96GM5 515 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 FAM118BQ9BPY3 351 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 TCF25Q9BQ70 676 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 SNX12Q9UMY4 172 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 ERVK-11Q9UQG0 969 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 C16orf96A6NNT2 1141 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 B2RBV5 119 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 DNALI1O14645 258 aaPredicted RBP11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 SERPINA4P29622 427 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 LRPAP1P30533 357 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 AKR1D1P51857 326 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 FAM83EQ2M2I3 478 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 FBXO47Q5MNV8 452 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 RSBN1Q5VWQ0 802 aaPredicted RBP11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 METTL16Q86W50 562 aaKnown RBP11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 CENPLQ8N0S6 344 aaPredicted RBP11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 TSTD1Q8NFU3 115 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 ANKEF1Q9NU02 776 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 ZNF446Q9NWS9 450 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 HCN3Q9P1Z3 774 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 GSG1L2A8MUP6 293 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 PEX14O75381 377 aa11.19□□□□□ -0.62
CACNA1C-216ENST00000399638 BDNFP23560 247 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms