RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 OR10H1Q9Y4A9 318 aa12.33□□□□□ -0.44
CACNA1C-213ENST00000399629 ACKR2O00590 384 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 TIPRLO75663 272 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 PSMA4P25789 261 aaKnown RBP12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 ITGA7Q13683 1181 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 CEP78Q5JTW2 689 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 IL17RAQ96F46 866 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 THTPAQ9BU02 230 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 KCNQ5Q9NR82 932 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 ISM1B1AKI9 464 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 TRDMT1O14717 391 aaKnown RBP12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 FMO4P31512 558 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 OTUD4Q01804 1114 aaKnown RBP12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 SRLQ86TD4 932 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 TTC7BQ86TV6 843 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 FAM20CQ8IXL6 584 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 EMC1Q8N766 993 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 MAB21L3Q8N8X9 362 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 HJURPQ8NCD3 748 aaPredicted RBP12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 TRPM4Q8TD43 1214 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 COPS5Q92905 334 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 POLR1EQ9GZS1 481 aaKnown RBP12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 MAGEB16A2A368 324 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 DEAF1O75398 565 aaPredicted RBP12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 GABRR2P28476 465 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 SHMT1P34896 483 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 NCF4Q15080 339 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 GALNT4Q8N4A0 578 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 ALBP02768 609 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 CXCR2P25025 360 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 NIPA1Q7RTP0 329 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 LONP2Q86WA8 852 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 C12orf50Q8NA57 414 aaPredicted RBP12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 POPDC2Q9HBU9 364 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 GTF3C4Q9UKN8 822 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 SIK3Q9Y2K2 1263 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 H3BMM5 538 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 PNMA6AP0CW24 399 aaPredicted RBP12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 GNSP15586 552 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 CHN1P15882 459 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 SELPP16109 830 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 KELP23276 732 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 RAD23BP54727 409 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 ERVK-21P61565 698 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 STX5Q13190 355 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 VPS33AQ96AX1 596 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 LRRC1Q9BTT6 524 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 RNF19AQ9NV58 838 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 ABI3Q9P2A4 366 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 STARD13Q9Y3M8 1113 aa12.32□□□□□ -0.44
CACNA1C-213ENST00000399629 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 PTPN1P18031 435 aaKnown RBP12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 KCNJ1P48048 391 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 EFCAB3Q8N7B9 438 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 CHP1Q99653 195 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 INTS7Q9NVH2 962 aaKnown RBP12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 ZMYM5Q9UJ78 669 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 PTPRUQ92729 1446 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 MAGEC1O60732 1142 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 LTFP02788 710 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 GLUD2P49448 558 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 SRSF11Q05519 484 aaKnown RBP12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 CRY1Q16526 586 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 WSCD1Q658N2 575 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 DCLRE1AQ6PJP8 1040 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 GPR135Q8IZ08 494 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 FBXO36Q8NEA4 188 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 FAM120BQ96EK7 910 aaKnown RBP12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 POLG2Q9UHN1 485 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 GTPBP1O00178 669 aaKnown RBP12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 TM9SF1O15321 606 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 MAPTP10636 758 aaKnown RBP12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 PSEN1P49768 467 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 NUP107P57740 925 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 ANTXR2P58335 489 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 FMR1Q06787 632 aaKnown RBP eCLIP12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 PKN1Q16512 942 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 SPOCD1Q6ZMY3 1216 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 ALKBH4Q9NXW9 302 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 TAS2R13Q9NYV9 303 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 ST3GAL5Q9UNP4 418 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 ARL2BPQ9Y2Y0 163 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 FOXN3O00409 490 aaPredicted RBP12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 WBP4O75554 376 aaKnown RBP12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 COX7A2P14406 83 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 TPH1P17752 444 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 SERPINB5P36952 375 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 CSNK2BP67870 215 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 ANKRD23Q86SG2 305 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 DEFB106AQ8N104 65 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 DTX3LQ8TDB6 740 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 CEP41Q9BYV8 373 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 A1CFQ9NQ94 594 aaKnown RBP12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 FAM153AQ9UHL3 310 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 GNPTGQ9UJJ9 305 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 PSME2Q9UL46 239 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 NCOA3Q9Y6Q9 1424 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 NT5C1B-RDH14C9J2C7 533 aa12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 CRYBB1P53674 252 aaPredicted RBP12.31□□□□□ -0.44
CACNA1C-213ENST00000399629 METTL3Q86U44 580 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms