RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 APOC4-APOC2K7ER74 178 aa13.44□□□□□ -0.26
ITSN1-208ENST00000399349 APOC2P02655 101 aa13.44□□□□□ -0.26
ITSN1-208ENST00000399349 MAPTP10636 758 aaKnown RBP13.44□□□□□ -0.26
ITSN1-208ENST00000399349 PGAM1P18669 254 aa13.44□□□□□ -0.26
ITSN1-208ENST00000399349 MAPK1P28482 360 aa13.44□□□□□ -0.26
ITSN1-208ENST00000399349 BEX3Q00994 111 aa13.44□□□□□ -0.26
ITSN1-208ENST00000399349 ZPBP2Q6X784 338 aa13.44□□□□□ -0.26
ITSN1-208ENST00000399349 C1orf186Q6ZWK4 172 aa13.44□□□□□ -0.26
ITSN1-208ENST00000399349 SH3RF1Q7Z6J0 888 aa13.44□□□□□ -0.26
ITSN1-208ENST00000399349 FAM83AQ86UY5 434 aa13.44□□□□□ -0.26
ITSN1-208ENST00000399349 PYDC1Q8WXC3 89 aa13.44□□□□□ -0.26
ITSN1-208ENST00000399349 HAS1Q92839 578 aa13.44□□□□□ -0.26
ITSN1-208ENST00000399349 VPS45Q9NRW7 570 aa13.44□□□□□ -0.26
ITSN1-208ENST00000399349 PCDHAC2Q9Y5I4 1007 aa13.44□□□□□ -0.26
ITSN1-208ENST00000399349 PXDNQ92626 1479 aa13.44□□□□□ -0.26
ITSN1-208ENST00000399349 BTN3A1O00481 513 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 PEX1O43933 1283 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 SEC22BO75396 215 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 RECQL4O94761 1208 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 PCDH8O95206 1070 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 PIGNO95427 931 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 EGFRP00533 1210 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 RAD23AP54725 363 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 MARK4Q96L34 752 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 TBCDQ9BTW9 1192 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 NMRAL1Q9HBL8 299 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 ETAA1Q9NY74 926 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 LIMD1Q9UGP4 676 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 LRRC10BA6NIK2 292 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 ADRB2P07550 413 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 KDELR1P24390 212 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 PLCL1Q15111 1095 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 C16orf59Q7L2K0 433 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 SLC22A9Q8IVM8 553 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 UCMAQ8WVF2 138 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 GLIS2Q9BZE0 524 aaPredicted RBP13.43□□□□□ -0.26
ITSN1-208ENST00000399349 POLG2Q9UHN1 485 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 PCDHB5Q9Y5E4 795 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 PCDHGC5Q9Y5F6 944 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 MAGEB16A2A368 324 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 PQBP1O60828 265 aaKnown RBP13.43□□□□□ -0.26
ITSN1-208ENST00000399349 ZMPSTE24O75844 475 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 FGFR3P22607 806 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 FMO4P31512 558 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 EPHB3P54753 998 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 NAGLUP54802 743 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 SLC34A1Q06495 639 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 GRTP1Q5TC63 336 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 RETSATQ6NUM9 610 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 FGD2Q7Z6J4 655 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 DHFR2Q86XF0 187 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 LGI2Q8N0V4 545 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 ATXN2LQ8WWM7 1075 aaKnown RBP13.43□□□□□ -0.26
ITSN1-208ENST00000399349 WDR41Q9HAD4 459 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 PDZK1P1A8MUH7 402 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 KRT6AP02538 564 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 KRT6BP04259 564 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 MPOP05164 745 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 KRT6CP48668 564 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 ELF3P78545 371 aaPredicted RBP13.43□□□□□ -0.26
ITSN1-208ENST00000399349 MRPS22P82650 360 aaKnown RBP13.43□□□□□ -0.26
ITSN1-208ENST00000399349 SLC39A12Q504Y0 691 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 ANKS6Q68DC2 871 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 TAF2Q6P1X5 1199 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 OR52K1Q8NGK4 314 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 TPD52L3Q96J77 140 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 KLHL25Q9H0H3 589 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 TAS2R13Q9NYV9 303 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 PDE4DIPQ5VU43 2346 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 CLOCKO15516 846 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 CLK2P49760 499 aaKnown RBP13.43□□□□□ -0.26
ITSN1-208ENST00000399349 YTHDF3Q7Z739 585 aaKnown RBP13.43□□□□□ -0.26
ITSN1-208ENST00000399349 TLK2Q86UE8 772 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 KIAA0319LQ8IZA0 1049 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 PGM2Q96G03 612 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 EMILIN2Q9BXX0 1053 aa13.43□□□□□ -0.26
ITSN1-208ENST00000399349 PDGFDQ9GZP0 370 aaPredicted RBP13.43□□□□□ -0.26
ITSN1-208ENST00000399349 AVENQ9NQS1 362 aaPredicted RBP13.43□□□□□ -0.26
ITSN1-208ENST00000399349 TNS2Q63HR2 1409 aa13.42□□□□□ -0.26
ITSN1-208ENST00000399349 FAM58BPP0C7Q3 252 aa13.42□□□□□ -0.26
ITSN1-208ENST00000399349 EIF4BP23588 611 aaKnown RBP13.42□□□□□ -0.26
ITSN1-208ENST00000399349 LPCAT2Q7L5N7 544 aa13.42□□□□□ -0.26
ITSN1-208ENST00000399349 GLT6D1Q7Z4J2 308 aa13.42□□□□□ -0.26
ITSN1-208ENST00000399349 OR8H2Q8N162 312 aa13.42□□□□□ -0.26
ITSN1-208ENST00000399349 PCSK9Q8NBP7 692 aaKnown RBP13.42□□□□□ -0.26
ITSN1-208ENST00000399349 OR6Y1Q8NGX8 325 aa13.42□□□□□ -0.26
ITSN1-208ENST00000399349 CDCA5Q96FF9 252 aa13.42□□□□□ -0.26
ITSN1-208ENST00000399349 SMARCD1Q96GM5 515 aa13.42□□□□□ -0.26
ITSN1-208ENST00000399349 VTA1Q9NP79 307 aa13.42□□□□□ -0.26
ITSN1-208ENST00000399349 DMAP1Q9NPF5 467 aaPredicted RBP13.42□□□□□ -0.26
ITSN1-208ENST00000399349 CYLDQ9NQC7 956 aa13.42□□□□□ -0.26
ITSN1-208ENST00000399349 TUBGCP4Q9UGJ1 667 aa13.42□□□□□ -0.26
ITSN1-208ENST00000399349 PPRC1Q5VV67 1664 aaKnown RBP13.42□□□□□ -0.26
ITSN1-208ENST00000399349 FAM237BA0A1B0GVD1 139 aa13.42□□□□□ -0.26
ITSN1-208ENST00000399349 PSMB4P28070 264 aa13.42□□□□□ -0.26
ITSN1-208ENST00000399349 GRK3P35626 688 aa13.42□□□□□ -0.26
ITSN1-208ENST00000399349 RRP1BQ14684 758 aaKnown RBP13.42□□□□□ -0.26
ITSN1-208ENST00000399349 MAPK11Q15759 364 aa13.42□□□□□ -0.26
ITSN1-208ENST00000399349 CCDC153Q494R4 210 aa13.42□□□□□ -0.26
ITSN1-208ENST00000399349 DACT2Q5SW24 774 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms