RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 CEP68Q76N32 757 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 SND1Q7KZF4 910 aaKnown RBP eCLIP14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 FAM131BQ86XD5 332 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 MCOLN2Q8IZK6 566 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 C3orf20Q8ND61 904 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 GAB3Q8WWW8 586 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 LMLNQ96KR4 655 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 RPRD1AQ96P16 312 aaPredicted RBP14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 GABRG3Q99928 467 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 CD248Q9HCU0 757 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 INTS6Q9UL03 887 aaKnown RBP14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 STON1Q9Y6Q2 735 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 FAM186AA6NE01 2351 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 A0A1W2PQJ5 194 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 TCRBV5S1A1TA0A578 114 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 H0Y626 953 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 ALDH1A2O94788 518 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 LUC7L3O95232 432 aaKnown RBP14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 GABRG2P18507 467 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 RRM1P23921 792 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 SDC4P31431 198 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 GSCP56915 257 aaPredicted RBP14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 RPL7AP62424 266 aaKnown RBP14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 BRMS1LQ5PSV4 323 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 HGSNATQ68CP4 663 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 MBLAC2Q68D91 279 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 WDR59Q6PJI9 974 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 KBTBD6Q86V97 674 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 AHI1Q8N157 1196 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 CCAR2Q8N163 923 aaKnown RBP14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 PGBD3Q8N328 593 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 FRMD1Q8N878 549 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 ZNF366Q8N895 744 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 UCMAQ8WVF2 138 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 RLN3Q8WXF3 142 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 HINFPQ9BQA5 517 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 SELENOOQ9BVL4 669 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 SLC6A17Q9H1V8 727 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 BCCIPQ9P287 314 aaKnown RBP eCLIP14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 CAPN11Q9UMQ6 739 aa14.56□□□□□ -0.08
HLA-DQB1-202ENST00000399079 EML5Q05BV3 1969 aa14.55□□□□□ -0.08
HLA-DQB1-202ENST00000399079 SIGLEC16A6NMB1 481 aa14.55□□□□□ -0.08
HLA-DQB1-202ENST00000399079 DDX3XO00571 662 aaKnown RBP eCLIP14.55□□□□□ -0.08
HLA-DQB1-202ENST00000399079 ATMINO43313 823 aaPredicted RBP14.55□□□□□ -0.08
HLA-DQB1-202ENST00000399079 TIMM44O43615 452 aa14.55□□□□□ -0.08
HLA-DQB1-202ENST00000399079 ENDOD1O94919 500 aa14.55□□□□□ -0.08
HLA-DQB1-202ENST00000399079 HLA-EP13747 358 aa14.55□□□□□ -0.08
HLA-DQB1-202ENST00000399079 CASP14P31944 242 aa14.55□□□□□ -0.08
HLA-DQB1-202ENST00000399079 RDXP35241 583 aaKnown RBP14.55□□□□□ -0.08
HLA-DQB1-202ENST00000399079 ENPP2Q13822 863 aa14.55□□□□□ -0.08
HLA-DQB1-202ENST00000399079 PTPRNQ16849 979 aa14.55□□□□□ -0.08
HLA-DQB1-202ENST00000399079 DNAJC24Q6P3W2 148 aa14.55□□□□□ -0.08
HLA-DQB1-202ENST00000399079 FAM160A2Q8N612 972 aaPredicted RBP14.55□□□□□ -0.08
HLA-DQB1-202ENST00000399079 WFIKKN2Q8TEU8 576 aa14.55□□□□□ -0.08
HLA-DQB1-202ENST00000399079 RUBCNQ92622 972 aa14.55□□□□□ -0.08
HLA-DQB1-202ENST00000399079 MCEEQ96PE7 176 aa14.55□□□□□ -0.08
HLA-DQB1-202ENST00000399079 LUC7L2Q9Y383 392 aaKnown RBP14.55□□□□□ -0.08
HLA-DQB1-202ENST00000399079 GVINP1Q7Z2Y8 2422 aa14.54□□□□□ -0.08
HLA-DQB1-202ENST00000399079 CNTN5O94779 1100 aa14.54□□□□□ -0.08
HLA-DQB1-202ENST00000399079 TPM3P06753 285 aa14.54□□□□□ -0.08
HLA-DQB1-202ENST00000399079 PLEKP08567 350 aaPredicted RBP14.54□□□□□ -0.08
HLA-DQB1-202ENST00000399079 POLR2EP19388 210 aaKnown RBP14.54□□□□□ -0.08
HLA-DQB1-202ENST00000399079 NDUFV2P19404 249 aa14.54□□□□□ -0.08
HLA-DQB1-202ENST00000399079 PRKCHP24723 683 aa14.54□□□□□ -0.08
HLA-DQB1-202ENST00000399079 PTPN9P43378 593 aa14.54□□□□□ -0.08
HLA-DQB1-202ENST00000399079 ZBED6P86452 979 aa14.54□□□□□ -0.08
HLA-DQB1-202ENST00000399079 TDRD12Q587J7 1177 aaKnown RBP14.54□□□□□ -0.08
HLA-DQB1-202ENST00000399079 RABGAP1LQ5R372 815 aa14.54□□□□□ -0.08
HLA-DQB1-202ENST00000399079 SERPINA13PQ6UXR4 307 aa14.54□□□□□ -0.08
HLA-DQB1-202ENST00000399079 CCDC117Q8IWD4 279 aaPredicted RBP14.54□□□□□ -0.08
HLA-DQB1-202ENST00000399079 APCDD1Q8J025 514 aa14.54□□□□□ -0.08
HLA-DQB1-202ENST00000399079 OR52K2Q8NGK3 314 aa14.54□□□□□ -0.08
HLA-DQB1-202ENST00000399079 MAGEB5Q9BZ81 275 aa14.54□□□□□ -0.08
HLA-DQB1-202ENST00000399079 RAB23Q9ULC3 237 aa14.54□□□□□ -0.08
HLA-DQB1-202ENST00000399079 PLA2G4CQ9UP65 541 aa14.54□□□□□ -0.08
HLA-DQB1-202ENST00000399079 PAXBP1Q9Y5B6 917 aa14.54□□□□□ -0.08
HLA-DQB1-202ENST00000399079 ZNF292O60281 2723 aa14.54□□□□□ -0.08
HLA-DQB1-202ENST00000399079 DMXL1Q9Y485 3027 aa14.53□□□□□ -0.08
HLA-DQB1-202ENST00000399079 A0A1B0GVM2 712 aa14.53□□□□□ -0.08
HLA-DQB1-202ENST00000399079 TCAF2A6NFQ2 919 aa14.53□□□□□ -0.08
HLA-DQB1-202ENST00000399079 NPC1O15118 1278 aa14.53□□□□□ -0.08
HLA-DQB1-202ENST00000399079 FTLP02792 175 aaPredicted RBP14.53□□□□□ -0.08
HLA-DQB1-202ENST00000399079 EPHX1P07099 455 aa14.53□□□□□ -0.08
HLA-DQB1-202ENST00000399079 DLDP09622 509 aaKnown RBP14.53□□□□□ -0.08
HLA-DQB1-202ENST00000399079 GPD1P21695 349 aa14.53□□□□□ -0.08
HLA-DQB1-202ENST00000399079 CSKP41240 450 aa14.53□□□□□ -0.08
HLA-DQB1-202ENST00000399079 CTSOP43234 321 aaPredicted RBP14.53□□□□□ -0.08
HLA-DQB1-202ENST00000399079 HDAC4P56524 1084 aa14.53□□□□□ -0.08
HLA-DQB1-202ENST00000399079 MTA1Q13330 715 aa14.53□□□□□ -0.08
HLA-DQB1-202ENST00000399079 FNDC3BQ53EP0 1204 aaKnown RBP14.53□□□□□ -0.08
HLA-DQB1-202ENST00000399079 USP39Q53GS9 565 aaKnown RBP14.53□□□□□ -0.08
HLA-DQB1-202ENST00000399079 ALFQ53S48 1182 aa14.53□□□□□ -0.08
HLA-DQB1-202ENST00000399079 PITRM1Q5JRX3 1037 aa14.53□□□□□ -0.08
HLA-DQB1-202ENST00000399079 PPP1R15BQ5SWA1 713 aa14.53□□□□□ -0.08
HLA-DQB1-202ENST00000399079 ARTNQ5T4W7 220 aa14.53□□□□□ -0.08
HLA-DQB1-202ENST00000399079 CXorf57Q6NSI4 855 aaKnown RBP14.53□□□□□ -0.08
HLA-DQB1-202ENST00000399079 ZNF683Q8IZ20 524 aa14.53□□□□□ -0.08
HLA-DQB1-202ENST00000399079 ZNF557Q8N988 423 aaPredicted RBP14.53□□□□□ -0.08
HLA-DQB1-202ENST00000399079 FAM172AQ8WUF8 416 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms