RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 UROC1Q96N76 676 aa11.59□□□□□ -0.55
TTC28-201ENST00000397906 UMPSP11172 480 aa11.59□□□□□ -0.55
TTC28-201ENST00000397906 POMGNT2Q8NAT1 580 aa11.59□□□□□ -0.55
TTC28-201ENST00000397906 DNAJC1Q96KC8 554 aaKnown RBP11.59□□□□□ -0.55
TTC28-201ENST00000397906 MKL2Q9ULH7 1088 aa11.59□□□□□ -0.55
TTC28-201ENST00000397906 ALBP02768 609 aa11.59□□□□□ -0.55
TTC28-201ENST00000397906 FEN1P39748 380 aaKnown RBP11.59□□□□□ -0.55
TTC28-201ENST00000397906 CD151P48509 253 aa11.59□□□□□ -0.55
TTC28-201ENST00000397906 SLC12A3P55017 1021 aa11.59□□□□□ -0.55
TTC28-201ENST00000397906 CSTF3Q12996 717 aaKnown RBP11.59□□□□□ -0.55
TTC28-201ENST00000397906 C15orf59Q2T9L4 293 aaPredicted RBP11.59□□□□□ -0.55
TTC28-201ENST00000397906 CAPRIN2Q6IMN6 1127 aaKnown RBP11.59□□□□□ -0.55
TTC28-201ENST00000397906 FIG4Q92562 907 aa11.59□□□□□ -0.55
TTC28-201ENST00000397906 FTHL17Q9BXU8 183 aa11.59□□□□□ -0.55
TTC28-201ENST00000397906 BLOC1S6Q9UL45 172 aa11.59□□□□□ -0.55
TTC28-201ENST00000397906 PLAGL2Q9UPG8 496 aa11.59□□□□□ -0.55
TTC28-201ENST00000397906 FRMPD4Q14CM0 1322 aa11.59□□□□□ -0.55
TTC28-201ENST00000397906 ZBTB14O43829 449 aa11.58□□□□□ -0.55
TTC28-201ENST00000397906 SMNDC1O75940 238 aaKnown RBP eCLIP11.58□□□□□ -0.55
TTC28-201ENST00000397906 RBP1P09455 135 aa11.58□□□□□ -0.55
TTC28-201ENST00000397906 MAGEA9P43362 315 aa11.58□□□□□ -0.55
TTC28-201ENST00000397906 ARHGAP17Q68EM7 881 aa11.58□□□□□ -0.55
TTC28-201ENST00000397906 FBXO39Q8N4B4 442 aa11.58□□□□□ -0.55
TTC28-201ENST00000397906 FNDC5Q8NAU1 212 aa11.58□□□□□ -0.55
TTC28-201ENST00000397906 OR10G6Q8NH81 332 aa11.58□□□□□ -0.55
TTC28-201ENST00000397906 VPS51Q9UID3 782 aa11.58□□□□□ -0.55
TTC28-201ENST00000397906 TPBGLP0DKB5 382 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 NEK2P51955 445 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 SEC24CP53992 1094 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 RINLQ6ZS11 566 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 TRPM8Q7Z2W7 1104 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 CERS5Q8N5B7 392 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 LENG1Q96BZ8 264 aaPredicted RBP11.58□□□□□ -0.56
TTC28-201ENST00000397906 BRD9Q9H8M2 597 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 MMRN1Q13201 1228 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 LRRN4Q8WUT4 740 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 EXOC2Q96KP1 924 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 KLC4Q9NSK0 619 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 SAE1Q9UBE0 346 aaPredicted RBP11.58□□□□□ -0.56
TTC28-201ENST00000397906 SNRPD1P62314 119 aaKnown RBP11.58□□□□□ -0.56
TTC28-201ENST00000397906 CCNJLQ8IV13 435 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 ZNF541Q9H0D2 1346 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 SLC9A3R1O14745 358 aaPredicted RBP11.58□□□□□ -0.56
TTC28-201ENST00000397906 GPR1P46091 355 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 PLK1P53350 603 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 TARBP2Q15633 366 aaKnown RBP11.58□□□□□ -0.56
TTC28-201ENST00000397906 ZPBP2Q6X784 338 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 PAWRQ96IZ0 340 aaKnown RBP11.58□□□□□ -0.56
TTC28-201ENST00000397906 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.58□□□□□ -0.56
TTC28-201ENST00000397906 POLR1DQ9Y2S0 133 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 EML3Q32P44 896 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 PLA2G4EQ3MJ16 856 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 SLC45A4Q5BKX6 768 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 ELMO1Q92556 727 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 ABCG4Q9H172 646 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 TOMM70O94826 608 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 UBTFL6P0CB48 400 aaPredicted RBP11.58□□□□□ -0.56
TTC28-201ENST00000397906 GZMAP12544 262 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 EIF4BP23588 611 aaKnown RBP11.58□□□□□ -0.56
TTC28-201ENST00000397906 C1QBPQ07021 282 aaKnown RBP11.58□□□□□ -0.56
TTC28-201ENST00000397906 DNAJC14Q6Y2X3 702 aaPredicted RBP11.58□□□□□ -0.56
TTC28-201ENST00000397906 SERPINB12Q96P63 405 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 CRADDP78560 199 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 POLR1EQ9GZS1 481 aaKnown RBP11.58□□□□□ -0.56
TTC28-201ENST00000397906 CDC42EP4Q9H3Q1 356 aaKnown RBP11.58□□□□□ -0.56
TTC28-201ENST00000397906 IL1RAPL1Q9NZN1 696 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 GLRA2P23416 452 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 CYLC2Q14093 348 aaPredicted RBP11.58□□□□□ -0.56
TTC28-201ENST00000397906 ARL15Q9NXU5 204 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 ABCG1P45844 678 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 C2orf49Q9BVC5 232 aaPredicted RBP11.58□□□□□ -0.56
TTC28-201ENST00000397906 TLE6Q9H808 572 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 TAS2R13Q9NYV9 303 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 SLIT1O75093 1534 aa11.58□□□□□ -0.56
TTC28-201ENST00000397906 GSAPA4D1B5 854 aa11.57□□□□□ -0.56
TTC28-201ENST00000397906 RGS5O15539 181 aa11.57□□□□□ -0.56
TTC28-201ENST00000397906 USP1O94782 785 aa11.57□□□□□ -0.56
TTC28-201ENST00000397906 PPP2R1BP30154 601 aa11.57□□□□□ -0.56
TTC28-201ENST00000397906 FKBP1AP62942 108 aaKnown RBP11.57□□□□□ -0.56
TTC28-201ENST00000397906 NTRK3Q16288 839 aa11.57□□□□□ -0.56
TTC28-201ENST00000397906 TTC7BQ86TV6 843 aa11.57□□□□□ -0.56
TTC28-201ENST00000397906 BRSK2Q8IWQ3 736 aa11.57□□□□□ -0.56
TTC28-201ENST00000397906 NSL1Q96IY1 281 aa11.57□□□□□ -0.56
TTC28-201ENST00000397906 KCTD14Q9BQ13 255 aaPredicted RBP11.57□□□□□ -0.56
TTC28-201ENST00000397906 CATSPERZQ9NTU4 200 aa11.57□□□□□ -0.56
TTC28-201ENST00000397906 AHSPQ9NZD4 102 aa11.57□□□□□ -0.56
TTC28-201ENST00000397906 B4GALT5O43286 388 aa11.57□□□□□ -0.56
TTC28-201ENST00000397906 ABL2P42684 1182 aa11.57□□□□□ -0.56
TTC28-201ENST00000397906 CREMQ03060 361 aa11.57□□□□□ -0.56
TTC28-201ENST00000397906 NPNTQ6UXI9 565 aa11.57□□□□□ -0.56
TTC28-201ENST00000397906 NIPA1Q7RTP0 329 aa11.57□□□□□ -0.56
TTC28-201ENST00000397906 TEX9Q8N6V9 391 aa11.57□□□□□ -0.56
TTC28-201ENST00000397906 SNX13Q9Y5W8 968 aa11.57□□□□□ -0.56
TTC28-201ENST00000397906 CHURC1-FNTBB4DL54 471 aa11.57□□□□□ -0.56
TTC28-201ENST00000397906 HSPA14Q0VDF9 509 aa11.57□□□□□ -0.56
TTC28-201ENST00000397906 STX5Q13190 355 aa11.57□□□□□ -0.56
TTC28-201ENST00000397906 ITGA7Q13683 1181 aa11.57□□□□□ -0.56
TTC28-201ENST00000397906 CBWD6Q4V339 395 aa11.57□□□□□ -0.56
TTC28-201ENST00000397906 PARGQ86W56 976 aa11.57□□□□□ -0.56
TTC28-201ENST00000397906 CXorf40BQ96DE9 158 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms