RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 E9PAM4 449 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 TNFSF14O43557 240 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 STX10O60499 249 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 TSPAN3O60637 253 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 RHOBTB3O94955 611 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 ATP5BP06576 529 aaKnown RBP9.13□□□□□ -0.95
CAPN3-208ENST00000397204 TRIM49P0CI25 452 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 TRIM49CP0CI26 452 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 CD27P26842 260 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 ACSL1P33121 698 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 GRK6P43250 576 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 GRIA4P48058 902 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 TKTL1P51854 596 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 RAD23BP54727 409 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 KIF19Q2TAC6 998 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 FNDC3BQ53EP0 1204 aaKnown RBP9.13□□□□□ -0.95
CAPN3-208ENST00000397204 MPP7Q5T2T1 576 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 FAM124AQ86V42 546 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 FMNL3Q8IVF7 1028 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 GUF1Q8N442 669 aaKnown RBP9.13□□□□□ -0.95
CAPN3-208ENST00000397204 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.13□□□□□ -0.95
CAPN3-208ENST00000397204 ZNF557Q8N988 423 aaPredicted RBP9.13□□□□□ -0.95
CAPN3-208ENST00000397204 FBXL13Q8NEE6 735 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 RNF139Q8WU17 664 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 GOLGA1Q92805 767 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 IGSF8Q969P0 613 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 SNX21Q969T3 373 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 ARID3AQ99856 593 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 C6orf106Q9H6K1 298 aaPredicted RBP9.13□□□□□ -0.95
CAPN3-208ENST00000397204 SGK2Q9HBY8 427 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 TM9SF3Q9HD45 589 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 PRSS16Q9NQE7 514 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 ABCC13Q9NSE7 274 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 KIAA1257Q9ULG3 409 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 SCML1Q9UN30 329 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 RAXQ9Y2V3 346 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 SNX11Q9Y5W9 270 aa9.13□□□□□ -0.95
CAPN3-208ENST00000397204 A0A1B0GVL5 298 aa9.12□□□□□ -0.95
CAPN3-208ENST00000397204 XPO1O14980 1071 aaKnown RBP9.12□□□□□ -0.95
CAPN3-208ENST00000397204 PAPSS1O43252 624 aaPredicted RBP9.12□□□□□ -0.95
CAPN3-208ENST00000397204 ZIC2O95409 532 aaPredicted RBP9.12□□□□□ -0.95
CAPN3-208ENST00000397204 SEMA4FO95754 770 aa9.12□□□□□ -0.95
CAPN3-208ENST00000397204 DNTTP04053 509 aa9.12□□□□□ -0.95
CAPN3-208ENST00000397204 DLDP09622 509 aaKnown RBP9.12□□□□□ -0.95
CAPN3-208ENST00000397204 CDK4P11802 303 aa9.12□□□□□ -0.95
CAPN3-208ENST00000397204 HLA-EP13747 358 aa9.12□□□□□ -0.95
CAPN3-208ENST00000397204 POLR2EP19388 210 aaKnown RBP9.12□□□□□ -0.95
CAPN3-208ENST00000397204 HOXD9P28356 352 aaPredicted RBP9.12□□□□□ -0.95
CAPN3-208ENST00000397204 HLA-FP30511 346 aa9.12□□□□□ -0.95
CAPN3-208ENST00000397204 BCAT1P54687 386 aa9.12□□□□□ -0.95
CAPN3-208ENST00000397204 RPS14P62263 151 aaKnown RBP9.12□□□□□ -0.95
CAPN3-208ENST00000397204 DNM1Q05193 864 aaKnown RBP9.12□□□□□ -0.95
CAPN3-208ENST00000397204 CYP4F3Q08477 520 aa9.12□□□□□ -0.95
CAPN3-208ENST00000397204 SMAD1Q15797 465 aaKnown RBP9.12□□□□□ -0.95
CAPN3-208ENST00000397204 BSPRYQ5W0U4 402 aa9.12□□□□□ -0.95
CAPN3-208ENST00000397204 CHST9Q7L1S5 443 aa9.12□□□□□ -0.95
CAPN3-208ENST00000397204 TRIM46Q7Z4K8 759 aa9.12□□□□□ -0.95
CAPN3-208ENST00000397204 ADIPOR2Q86V24 386 aa9.12□□□□□ -0.95
CAPN3-208ENST00000397204 AHI1Q8N157 1196 aa9.12□□□□□ -0.95
CAPN3-208ENST00000397204 SCML4Q8N228 414 aa9.12□□□□□ -0.95
CAPN3-208ENST00000397204 HNRNPLLQ8WVV9 542 aaKnown RBP9.12□□□□□ -0.95
CAPN3-208ENST00000397204 SNX19Q92543 992 aa9.12□□□□□ -0.95
CAPN3-208ENST00000397204 SEMA4DQ92854 862 aa9.12□□□□□ -0.95
CAPN3-208ENST00000397204 AZIN2Q96A70 460 aa9.12□□□□□ -0.95
CAPN3-208ENST00000397204 SKA1Q96BD8 255 aa9.12□□□□□ -0.95
CAPN3-208ENST00000397204 BIRC7Q96CA5 298 aa9.12□□□□□ -0.95
CAPN3-208ENST00000397204 ITPKCQ96DU7 683 aa9.12□□□□□ -0.95
CAPN3-208ENST00000397204 IPO9Q96P70 1041 aaKnown RBP9.12□□□□□ -0.95
CAPN3-208ENST00000397204 ULBP1Q9BZM6 244 aa9.12□□□□□ -0.95
CAPN3-208ENST00000397204 ZFAND3Q9H8U3 227 aa9.12□□□□□ -0.95
CAPN3-208ENST00000397204 LRRC4Q9HBW1 653 aa9.12□□□□□ -0.95
CAPN3-208ENST00000397204 ABCB8Q9NUT2 735 aa9.12□□□□□ -0.95
CAPN3-208ENST00000397204 HESX1Q9UBX0 185 aa9.12□□□□□ -0.95
CAPN3-208ENST00000397204 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.12□□□□□ -0.95
CAPN3-208ENST00000397204 HPSEQ9Y251 543 aa9.12□□□□□ -0.95
CAPN3-208ENST00000397204 NCKAP1Q9Y2A7 1128 aa9.12□□□□□ -0.95
CAPN3-208ENST00000397204 BTBD3Q9Y2F9 522 aa9.12□□□□□ -0.95
CAPN3-208ENST00000397204 MYH10P35580 1976 aa9.12□□□□□ -0.95
CAPN3-208ENST00000397204 A0A087WV48 116 aa9.11□□□□□ -0.95
CAPN3-208ENST00000397204 FAM237AA0A1B0GTK4 181 aa9.11□□□□□ -0.95
CAPN3-208ENST00000397204 CETN3O15182 167 aa9.11□□□□□ -0.95
CAPN3-208ENST00000397204 IRAK2O43187 625 aa9.11□□□□□ -0.95
CAPN3-208ENST00000397204 FSBPO95073 299 aa9.11□□□□□ -0.95
CAPN3-208ENST00000397204 PABPC1P11940 636 aaKnown RBP9.11□□□□□ -0.95
CAPN3-208ENST00000397204 PFKFB1P16118 471 aa9.11□□□□□ -0.95
CAPN3-208ENST00000397204 CTSKP43235 329 aa9.11□□□□□ -0.95
CAPN3-208ENST00000397204 CCT8P50990 548 aa9.11□□□□□ -0.95
CAPN3-208ENST00000397204 RACK1P63244 317 aaKnown RBP9.11□□□□□ -0.95
CAPN3-208ENST00000397204 EDRF1Q3B7T1 1238 aa9.11□□□□□ -0.95
CAPN3-208ENST00000397204 INAVAQ3KP66 663 aa9.11□□□□□ -0.95
CAPN3-208ENST00000397204 TTC31Q49AM3 519 aaPredicted RBP9.11□□□□□ -0.95
CAPN3-208ENST00000397204 SGO2Q562F6 1265 aa9.11□□□□□ -0.95
CAPN3-208ENST00000397204 MBLAC2Q68D91 279 aa9.11□□□□□ -0.95
CAPN3-208ENST00000397204 USP30Q70CQ3 517 aa9.11□□□□□ -0.95
CAPN3-208ENST00000397204 BHLHA9Q7RTU4 235 aa9.11□□□□□ -0.95
CAPN3-208ENST00000397204 TMPRSS12Q86WS5 348 aa9.11□□□□□ -0.95
CAPN3-208ENST00000397204 CACUL1Q86Y37 369 aa9.11□□□□□ -0.95
CAPN3-208ENST00000397204 UNC45BQ8IWX7 931 aa9.11□□□□□ -0.95
CAPN3-208ENST00000397204 KDM1BQ8NB78 822 aa9.11□□□□□ -0.95
CAPN3-208ENST00000397204 CYB5D2Q8WUJ1 264 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms