RNA–Protein interactions for RNA: ENST00000396684.2

ATN1-202, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-202ENST00000396684 FZD10Q9ULW2 581 aa12.22□□□□□ -0.45
ATN1-202ENST00000396684 MFSD11O43934 449 aa12.22□□□□□ -0.45
ATN1-202ENST00000396684 STAMBPO95630 424 aa12.22□□□□□ -0.45
ATN1-202ENST00000396684 RASSF2P50749 326 aa12.22□□□□□ -0.45
ATN1-202ENST00000396684 LAMB3Q13751 1172 aa12.22□□□□□ -0.45
ATN1-202ENST00000396684 POLD3Q15054 466 aaPredicted RBP12.22□□□□□ -0.45
ATN1-202ENST00000396684 MTFR1Q15390 333 aa12.22□□□□□ -0.45
ATN1-202ENST00000396684 NUDCD3Q8IVD9 361 aa12.22□□□□□ -0.45
ATN1-202ENST00000396684 PPP2R3CQ969Q6 453 aa12.22□□□□□ -0.45
ATN1-202ENST00000396684 PCMTD2Q9NV79 361 aa12.22□□□□□ -0.45
ATN1-202ENST00000396684 RAD54BQ9Y620 910 aa12.22□□□□□ -0.45
ATN1-202ENST00000396684 BCLAF3A2AJT9 711 aaKnown RBP12.22□□□□□ -0.45
ATN1-202ENST00000396684 C9IYK1 514 aa12.22□□□□□ -0.45
ATN1-202ENST00000396684 MYL4P12829 197 aa12.22□□□□□ -0.45
ATN1-202ENST00000396684 L1CAMP32004 1257 aa12.22□□□□□ -0.45
ATN1-202ENST00000396684 MAP3K21Q5TCX8 1036 aa12.22□□□□□ -0.45
ATN1-202ENST00000396684 SCARA3Q6AZY7 606 aa12.22□□□□□ -0.45
ATN1-202ENST00000396684 HFE2Q6ZVN8 426 aa12.22□□□□□ -0.45
ATN1-202ENST00000396684 SDCCAG8Q86SQ7 713 aaPredicted RBP12.22□□□□□ -0.45
ATN1-202ENST00000396684 TRIM55Q9BYV6 548 aa12.22□□□□□ -0.45
ATN1-202ENST00000396684 ZYG11BQ9C0D3 744 aa12.22□□□□□ -0.45
ATN1-202ENST00000396684 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.21□□□□□ -0.45
ATN1-202ENST00000396684 PITPNM1O00562 1244 aa12.21□□□□□ -0.45
ATN1-202ENST00000396684 MGEA5O60502 916 aa12.21□□□□□ -0.45
ATN1-202ENST00000396684 NFKBIAP25963 317 aa12.21□□□□□ -0.45
ATN1-202ENST00000396684 PPARGP37231 505 aaPredicted RBP12.21□□□□□ -0.45
ATN1-202ENST00000396684 HNRNPH2P55795 449 aaKnown RBP12.21□□□□□ -0.45
ATN1-202ENST00000396684 ADAM17P78536 824 aa12.21□□□□□ -0.45
ATN1-202ENST00000396684 CDH17Q12864 832 aa12.21□□□□□ -0.45
ATN1-202ENST00000396684 PRSS55Q6UWB4 352 aaPredicted RBP12.21□□□□□ -0.45
ATN1-202ENST00000396684 CTU1Q7Z7A3 348 aaKnown RBP12.21□□□□□ -0.45
ATN1-202ENST00000396684 FICDQ9BVA6 458 aa12.21□□□□□ -0.45
ATN1-202ENST00000396684 NSMCE4AQ9NXX6 385 aa12.21□□□□□ -0.45
ATN1-202ENST00000396684 DNAJB4Q9UDY4 337 aa12.21□□□□□ -0.45
ATN1-202ENST00000396684 FBXW11Q9UKB1 542 aa12.21□□□□□ -0.45
ATN1-202ENST00000396684 PHF24Q9UPV7 400 aa12.21□□□□□ -0.45
ATN1-202ENST00000396684 RBBP6Q7Z6E9 1792 aaKnown RBP12.21□□□□□ -0.45
ATN1-202ENST00000396684 SBF1O95248 1867 aa12.21□□□□□ -0.45
ATN1-202ENST00000396684 BRCA1P38398 1863 aaKnown RBP12.21□□□□□ -0.45
ATN1-202ENST00000396684 ERI2A8K979 691 aaKnown RBP12.21□□□□□ -0.45
ATN1-202ENST00000396684 MGAT1P26572 445 aa12.21□□□□□ -0.45
ATN1-202ENST00000396684 CREMQ03060 361 aa12.21□□□□□ -0.45
ATN1-202ENST00000396684 CNKSR3Q6P9H4 555 aa12.21□□□□□ -0.45
ATN1-202ENST00000396684 ALKAL1Q6UXT8 129 aa12.21□□□□□ -0.45
ATN1-202ENST00000396684 GPATCH11Q8N954 259 aa12.21□□□□□ -0.45
ATN1-202ENST00000396684 TTC8Q8TAM2 541 aa12.21□□□□□ -0.45
ATN1-202ENST00000396684 C11orf49Q9H6J7 331 aa12.21□□□□□ -0.45
ATN1-202ENST00000396684 ALG13Q9NP73 1137 aaKnown RBP12.21□□□□□ -0.45
ATN1-202ENST00000396684 PIGVQ9NUD9 493 aa12.21□□□□□ -0.45
ATN1-202ENST00000396684 USP12O75317 370 aa12.21□□□□□ -0.46
ATN1-202ENST00000396684 LRIG2O94898 1065 aa12.21□□□□□ -0.46
ATN1-202ENST00000396684 ZWINTO95229 277 aa12.21□□□□□ -0.46
ATN1-202ENST00000396684 ABHD2P08910 425 aa12.21□□□□□ -0.46
ATN1-202ENST00000396684 AVPR1AP37288 418 aa12.21□□□□□ -0.46
ATN1-202ENST00000396684 SLC11A1P49279 550 aa12.21□□□□□ -0.46
ATN1-202ENST00000396684 TWF1Q12792 350 aa12.21□□□□□ -0.46
ATN1-202ENST00000396684 CCDC142Q17RM4 750 aa12.21□□□□□ -0.46
ATN1-202ENST00000396684 CRLF3Q8IUI8 442 aa12.21□□□□□ -0.46
ATN1-202ENST00000396684 CARNMT1Q8N4J0 409 aa12.21□□□□□ -0.46
ATN1-202ENST00000396684 FBXO22Q8NEZ5 403 aa12.21□□□□□ -0.46
ATN1-202ENST00000396684 ZNF473Q8WTR7 871 aaKnown RBP12.21□□□□□ -0.46
ATN1-202ENST00000396684 DDI1Q8WTU0 396 aa12.21□□□□□ -0.46
ATN1-202ENST00000396684 DPF3Q92784 378 aa12.21□□□□□ -0.46
ATN1-202ENST00000396684 ATXN3LQ9H3M9 355 aa12.21□□□□□ -0.46
ATN1-202ENST00000396684 ALOX15BO15296 676 aa12.2□□□□□ -0.46
ATN1-202ENST00000396684 ZDHHC24Q6UX98 284 aa12.2□□□□□ -0.46
ATN1-202ENST00000396684 CALML6Q8TD86 181 aa12.2□□□□□ -0.46
ATN1-202ENST00000396684 CPT1BQ92523 772 aa12.2□□□□□ -0.46
ATN1-202ENST00000396684 PRCCQ92733 491 aaPredicted RBP12.2□□□□□ -0.46
ATN1-202ENST00000396684 NTAN1Q96AB6 310 aa12.2□□□□□ -0.46
ATN1-202ENST00000396684 TMEM175Q9BSA9 504 aa12.2□□□□□ -0.46
ATN1-202ENST00000396684 CBX4O00257 560 aa12.2□□□□□ -0.46
ATN1-202ENST00000396684 RPL17P18621 184 aaKnown RBP12.2□□□□□ -0.46
ATN1-202ENST00000396684 AFF1P51825 1210 aaKnown RBP12.2□□□□□ -0.46
ATN1-202ENST00000396684 LVRNQ6Q4G3 990 aa12.2□□□□□ -0.46
ATN1-202ENST00000396684 MAML1Q92585 1016 aa12.2□□□□□ -0.46
ATN1-202ENST00000396684 GRAMD1AQ96CP6 724 aa12.2□□□□□ -0.46
ATN1-202ENST00000396684 QKIQ96PU8 341 aaKnown RBP eCLIP12.2□□□□□ -0.464e-19■■■■■ 32.1
ATN1-202ENST00000396684 PEBP4Q96S96 227 aa12.2□□□□□ -0.46
ATN1-202ENST00000396684 CXCL16Q9H2A7 254 aa12.2□□□□□ -0.46
ATN1-202ENST00000396684 ELAC1Q9H777 363 aaKnown RBP12.2□□□□□ -0.46
ATN1-202ENST00000396684 ZDHHC18Q9NUE0 388 aa12.2□□□□□ -0.46
ATN1-202ENST00000396684 VPS28Q9UK41 221 aa12.2□□□□□ -0.46
ATN1-202ENST00000396684 WDR27A2RRH5 827 aa12.2□□□□□ -0.46
ATN1-202ENST00000396684 BANF1O75531 89 aa12.2□□□□□ -0.46
ATN1-202ENST00000396684 GSTA1P08263 222 aa12.2□□□□□ -0.46
ATN1-202ENST00000396684 GSTA2P09210 222 aa12.2□□□□□ -0.46
ATN1-202ENST00000396684 ZNF252P-AS1Q0IIN9 211 aa12.2□□□□□ -0.46
ATN1-202ENST00000396684 AUHQ13825 339 aaKnown RBP12.2□□□□□ -0.46
ATN1-202ENST00000396684 HIC1Q14526 733 aa12.2□□□□□ -0.46
ATN1-202ENST00000396684 CCDC6Q16204 474 aa12.2□□□□□ -0.46
ATN1-202ENST00000396684 PPP1R15BQ5SWA1 713 aa12.2□□□□□ -0.46
ATN1-202ENST00000396684 RNASEH2BQ5TBB1 312 aaKnown RBP12.2□□□□□ -0.46
ATN1-202ENST00000396684 CCDC149Q6ZUS6 474 aa12.2□□□□□ -0.46
ATN1-202ENST00000396684 RAB44Q7Z6P3 723 aaPredicted RBP12.2□□□□□ -0.46
ATN1-202ENST00000396684 LRRC49Q8IUZ0 686 aa12.2□□□□□ -0.46
ATN1-202ENST00000396684 EFHBQ8N7U6 833 aa12.2□□□□□ -0.46
ATN1-202ENST00000396684 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.2□□□□□ -0.468e-11■■■■■ 47.7
ATN1-202ENST00000396684 ZNF784Q8NCA9 323 aaPredicted RBP12.2□□□□□ -0.46
ATN1-202ENST00000396684 C2orf15Q8WU43 125 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms