RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 MGAT1P26572 445 aa10.09□□□□□ -0.79
TRIM39-203ENST00000396547 PTPN7P35236 360 aa10.09□□□□□ -0.79
TRIM39-203ENST00000396547 MTTPP55157 894 aa10.09□□□□□ -0.79
TRIM39-203ENST00000396547 GBE1Q04446 702 aa10.09□□□□□ -0.79
TRIM39-203ENST00000396547 CBX3Q13185 183 aa10.09□□□□□ -0.79
TRIM39-203ENST00000396547 Q3C1V9 767 aa10.09□□□□□ -0.79
TRIM39-203ENST00000396547 FSCBQ5H9T9 825 aa10.09□□□□□ -0.79
TRIM39-203ENST00000396547 LDLRAD1Q5T700 205 aa10.09□□□□□ -0.79
TRIM39-203ENST00000396547 LAYNQ6UX15 382 aa10.09□□□□□ -0.79
TRIM39-203ENST00000396547 ARCQ7LC44 396 aa10.09□□□□□ -0.79
TRIM39-203ENST00000396547 DSELQ8IZU8 1212 aa10.09□□□□□ -0.79
TRIM39-203ENST00000396547 PCDH20Q8N6Y1 951 aaKnown RBP10.09□□□□□ -0.79
TRIM39-203ENST00000396547 TMEM174Q8WUU8 243 aa10.09□□□□□ -0.79
TRIM39-203ENST00000396547 PPWD1Q96BP3 646 aaKnown RBP10.09□□□□□ -0.79
TRIM39-203ENST00000396547 SIGLEC10Q96LC7 697 aa10.09□□□□□ -0.79
TRIM39-203ENST00000396547 AGAP3Q96P47 875 aa10.09□□□□□ -0.79
TRIM39-203ENST00000396547 RNF157Q96PX1 679 aa10.09□□□□□ -0.79
TRIM39-203ENST00000396547 TWNKQ96RR1 684 aa10.09□□□□□ -0.79
TRIM39-203ENST00000396547 SORT1Q99523 831 aa10.09□□□□□ -0.79
TRIM39-203ENST00000396547 MRPS26Q9BYN8 205 aaKnown RBP10.09□□□□□ -0.79
TRIM39-203ENST00000396547 SENP6Q9GZR1 1112 aaPredicted RBP10.09□□□□□ -0.79
TRIM39-203ENST00000396547 COX16Q9P0S2 106 aa10.09□□□□□ -0.79
TRIM39-203ENST00000396547 DMTF1Q9Y222 760 aa10.09□□□□□ -0.79
TRIM39-203ENST00000396547 USP12O75317 370 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 EGFRP00533 1210 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 CHRNGP07510 517 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 TSHRP16473 764 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 PSMC3P17980 439 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 PRKCHP24723 683 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 PHKA2P46019 1235 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 GLRBP48167 497 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 ATXN1P54253 815 aaKnown RBP10.08□□□□□ -0.8
TRIM39-203ENST00000396547 SLFN12LQ6IEE8 588 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 CYP2R1Q6VVX0 501 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 SAMD7Q7Z3H4 446 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 RBM12BQ8IXT5 1001 aaKnown RBP10.08□□□□□ -0.8
TRIM39-203ENST00000396547 CPNE9Q8IYJ1 553 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 PLD6Q8N2A8 252 aaKnown RBP10.08□□□□□ -0.8
TRIM39-203ENST00000396547 MARVELD2Q8N4S9 558 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 TSPAN14Q8NG11 270 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 SLC7A3Q8WY07 619 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 WNK4Q96J92 1243 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 NPAS2Q99743 824 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 JPH1Q9HDC5 661 aaPredicted RBP10.08□□□□□ -0.8
TRIM39-203ENST00000396547 ZNF180Q9UJW8 692 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 ZNF510Q9Y2H8 683 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 ENTPD3O75355 529 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 LDHAP00338 332 aaKnown RBP10.08□□□□□ -0.8
TRIM39-203ENST00000396547 GSRP00390 522 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 PDGFRBP09619 1106 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 PTPN1P18031 435 aaKnown RBP10.08□□□□□ -0.8
TRIM39-203ENST00000396547 MPSTP25325 297 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 PIK3R1P27986 724 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 SOX11P35716 441 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 ENTPD1P49961 510 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 ZNF132P52740 706 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 SLC10A2Q12908 348 aaPredicted RBP10.08□□□□□ -0.8
TRIM39-203ENST00000396547 TNFAIP1Q13829 316 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 LPIN1Q14693 890 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 SLC44A4Q53GD3 710 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 IL31Q6EBC2 164 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 PPP1R2P3Q6NXS1 205 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 BNC2Q6ZN30 1099 aaPredicted RBP10.08□□□□□ -0.8
TRIM39-203ENST00000396547 PQLC3Q8N755 202 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 NIPA2Q8N8Q9 360 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 TDRD5Q8NAT2 981 aaKnown RBP10.08□□□□□ -0.8
TRIM39-203ENST00000396547 KYQ8NBH2 561 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 NLRP7Q8WX94 980 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 ATP6V1E2Q96A05 226 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 SERPINI1Q99574 410 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 PCDHAC1Q9H158 963 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 SDCBP2Q9H190 292 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 TCF7L2Q9NQB0 619 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 FAM49BQ9NUQ9 324 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 MFHAS1Q9Y4C4 1052 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 HES2Q9Y543 173 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 PDLIM1O00151 329 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 GLRA3O75311 464 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 FBXO21O94952 628 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 CCDC166P0CW27 439 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 XIAPP98170 497 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 ANKDD1AQ495B1 522 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 PACS1Q6VY07 963 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 NAPRTQ6XQN6 538 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 ZNF554Q86TJ5 538 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 ZNF410Q86VK4 478 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 RNF168Q8IYW5 571 aaPredicted RBP10.08□□□□□ -0.8
TRIM39-203ENST00000396547 RNF169Q8NCN4 708 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 PCDH19Q8TAB3 1148 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 CDKL2Q92772 493 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 CDCA5Q96FF9 252 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 ZFRQ96KR1 1074 aaKnown RBP10.08□□□□□ -0.8
TRIM39-203ENST00000396547 TEPSINQ96N21 525 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 TMEM79Q9BSE2 394 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 SLC4A5Q9BY07 1137 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 C17orf75Q9HAS0 396 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 RRN3Q9NYV6 651 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 SORCS3Q9UPU3 1222 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 EFR3BQ9Y2G0 817 aa10.08□□□□□ -0.8
TRIM39-203ENST00000396547 SNX13Q9Y5W8 968 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms