RNA–Protein interactions for RNA: ENST00000394196.8

CHD2-201, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD2, Length 9,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-201ENST00000394196 GDAQ9Y2T3 454 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 MEMO1Q9Y316 297 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 IFRD1O00458 451 aaPredicted RBP9.23□□□□□ -0.93
CHD2-201ENST00000394196 ZNF185O15231 689 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 IPO13O94829 963 aaKnown RBP9.23□□□□□ -0.93
CHD2-201ENST00000394196 HTRA4P83105 476 aaPredicted RBP9.23□□□□□ -0.93
CHD2-201ENST00000394196 COASYQ13057 564 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 DPYSQ14117 519 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 LCN1P1Q5VSP4 162 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 SSX9Q7RTT3 188 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 KCTD14Q9BQ13 255 aaPredicted RBP9.23□□□□□ -0.93
CHD2-201ENST00000394196 THAP1Q9NVV9 213 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 CSADQ9Y600 493 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 ULK1O75385 1050 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 KHDRBS3O75525 346 aaKnown RBP9.23□□□□□ -0.93
CHD2-201ENST00000394196 ITGA10O75578 1167 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 AKT1P31749 480 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 PIK3CGP48736 1102 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 AFF1P51825 1210 aaKnown RBP9.23□□□□□ -0.93
CHD2-201ENST00000394196 CCNA1P78396 465 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 CDKL1Q00532 357 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 TRMT2AQ8IZ69 625 aaKnown RBP9.23□□□□□ -0.93
CHD2-201ENST00000394196 CDK20Q8IZL9 346 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 RRN3P2A6NIE6 340 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 PPEF2O14830 753 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 RECQL5O94762 991 aaPredicted RBP9.23□□□□□ -0.93
CHD2-201ENST00000394196 HLA-DRAP01903 254 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 RBP1P09455 135 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 PPP2R1BP30154 601 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 STAT3P40763 770 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 ZNF235Q14590 738 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 PDPK2PQ6A1A2 396 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 CYB5RLQ6IPT4 315 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 RBM44Q6ZP01 1051 aaKnown RBP9.23□□□□□ -0.93
CHD2-201ENST00000394196 ANKFN1Q8N957 763 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 TRPV3Q8NET8 790 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 SHANK2Q9UPX8 1470 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 RGL2O15211 777 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 EPCAMP16422 314 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 HTR2AP28223 471 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 FAM102AQ5T9C2 384 aaPredicted RBP9.23□□□□□ -0.93
CHD2-201ENST00000394196 DENND1BQ6P3S1 775 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 GALNT7Q86SF2 657 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 EPHX4Q8IUS5 362 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 CCSER1Q9C0I3 900 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 SLC52A2Q9HAB3 445 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 ALG13Q9NP73 1137 aaKnown RBP9.23□□□□□ -0.93
CHD2-201ENST00000394196 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.23□□□□□ -0.932e-6■□□□□ 11
CHD2-201ENST00000394196 CA5BQ9Y2D0 317 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 SCGNO76038 276 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 IFNA17P01571 189 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 IL1R1P14778 569 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 ATP6V1B2P21281 511 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 COILP38432 576 aaPredicted RBP9.23□□□□□ -0.93
CHD2-201ENST00000394196 PYDC2Q56P42 97 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 PAPD7Q5XG87 772 aaKnown RBP9.23□□□□□ -0.93
CHD2-201ENST00000394196 MARCH10Q8NA82 808 aaPredicted RBP9.23□□□□□ -0.93
CHD2-201ENST00000394196 UXS1Q8NBZ7 420 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 OR6B3Q8NGW1 331 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 C11orf70Q9BRQ4 267 aa9.23□□□□□ -0.93
CHD2-201ENST00000394196 ZNF219Q9P2Y4 722 aaPredicted RBP9.23□□□□□ -0.93
CHD2-201ENST00000394196 LOC100653049A0A140TA62 436 aa9.22□□□□□ -0.93
CHD2-201ENST00000394196 LDOC1O95751 146 aaPredicted RBP9.22□□□□□ -0.93
CHD2-201ENST00000394196 ANXA5P08758 320 aa9.22□□□□□ -0.93
CHD2-201ENST00000394196 PROZP22891 400 aa9.22□□□□□ -0.93
CHD2-201ENST00000394196 DSG2Q14126 1118 aa9.22□□□□□ -0.93
CHD2-201ENST00000394196 MB21D2Q8IYB1 491 aaPredicted RBP9.22□□□□□ -0.93
CHD2-201ENST00000394196 DEPDC4Q8N2C3 294 aa9.22□□□□□ -0.93
CHD2-201ENST00000394196 ASCC1Q8N9N2 400 aaKnown RBP9.22□□□□□ -0.93
CHD2-201ENST00000394196 STOML3Q8TAV4 291 aa9.22□□□□□ -0.93
CHD2-201ENST00000394196 RIN2Q8WYP3 895 aaPredicted RBP9.22□□□□□ -0.93
CHD2-201ENST00000394196 GPRASP2Q96D09 838 aa9.22□□□□□ -0.93
CHD2-201ENST00000394196 DNMT1P26358 1616 aaKnown RBP9.22□□□□□ -0.93
CHD2-201ENST00000394196 TSPAN19P0C672 248 aa9.22□□□□□ -0.93
CHD2-201ENST00000394196 IL13P35225 146 aa9.22□□□□□ -0.93
CHD2-201ENST00000394196 ITGA8P53708 1063 aa9.22□□□□□ -0.93
CHD2-201ENST00000394196 GSCP56915 257 aaPredicted RBP9.22□□□□□ -0.93
CHD2-201ENST00000394196 ATP2C1P98194 919 aaPredicted RBP9.22□□□□□ -0.93
CHD2-201ENST00000394196 RAPSNQ13702 412 aa9.22□□□□□ -0.93
CHD2-201ENST00000394196 TRAPPC3LQ5T215 181 aa9.22□□□□□ -0.93
CHD2-201ENST00000394196 AAGABQ6PD74 315 aa9.22□□□□□ -0.93
CHD2-201ENST00000394196 DHFR2Q86XF0 187 aa9.22□□□□□ -0.93
CHD2-201ENST00000394196 GPD1LQ8N335 351 aa9.22□□□□□ -0.93
CHD2-201ENST00000394196 ACTRT2Q8TDY3 377 aa9.22□□□□□ -0.93
CHD2-201ENST00000394196 CREB3L1Q96BA8 519 aa9.22□□□□□ -0.93
CHD2-201ENST00000394196 EYA1Q99502 592 aa9.22□□□□□ -0.93
CHD2-201ENST00000394196 SHCBP1LQ9BZQ2 653 aa9.22□□□□□ -0.93
CHD2-201ENST00000394196 RAB21Q9UL25 225 aa9.22□□□□□ -0.93
CHD2-201ENST00000394196 RAB26Q9ULW5 256 aa9.22□□□□□ -0.93
CHD2-201ENST00000394196 KAT6AQ92794 2004 aa9.22□□□□□ -0.93
CHD2-201ENST00000394196 MPOP05164 745 aa9.22□□□□□ -0.93
CHD2-201ENST00000394196 PRMT2P55345 433 aa9.22□□□□□ -0.93
CHD2-201ENST00000394196 SPOCK1Q08629 439 aa9.22□□□□□ -0.93
CHD2-201ENST00000394196 DLGAP5Q15398 846 aa9.22□□□□□ -0.93
CHD2-201ENST00000394196 DDB1Q16531 1140 aa9.22□□□□□ -0.93
CHD2-201ENST00000394196 EAPPQ56P03 285 aaPredicted RBP9.22□□□□□ -0.93
CHD2-201ENST00000394196 SLC45A4Q5BKX6 768 aa9.22□□□□□ -0.93
CHD2-201ENST00000394196 ZNF767PQ75MW2 155 aa9.22□□□□□ -0.93
CHD2-201ENST00000394196 MTDHQ86UE4 582 aaKnown RBP9.22□□□□□ -0.93
CHD2-201ENST00000394196 THNSL1Q8IYQ7 743 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms