RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 LMLNQ96KR4 655 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 RPRD1AQ96P16 312 aaPredicted RBP7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 MCEEQ96PE7 176 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 GABRG3Q99928 467 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 MAGEB5Q9BZ81 275 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 MTG2Q9H4K7 406 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 CD248Q9HCU0 757 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 ELOVL2Q9NXB9 296 aa7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 THAP10Q9P2Z0 257 aaPredicted RBP7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 INTS6Q9UL03 887 aaKnown RBP7.93□□□□□ -1.14
HMGB3P1-201ENST00000393368 TCRBV5S1A1TA0A578 114 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 TYW5A2RUC4 315 aaKnown RBP7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 C2CD4BA6NLJ0 364 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 H0Y626 953 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 DDX3XO00571 662 aaKnown RBP eCLIP7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 AP5Z1O43299 807 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 CNTN5O94779 1100 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 GYPCP04921 128 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 SLC2A3P11169 496 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 KRT3P12035 628 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 PDGFRAP16234 1089 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 NDUFV2P19404 249 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 MZF1P28698 734 aaPredicted RBP7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 HOXA6P31267 233 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 SDC4P31431 198 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 CASP14P31944 242 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 RDXP35241 583 aaKnown RBP7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 CSKP41240 450 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 ZNF445P59923 1031 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 RPL7AP62424 266 aaKnown RBP7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 OGDHQ02218 1023 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 KLHL30Q0D2K2 578 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 PTPRNQ16849 979 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 FNDC3BQ53EP0 1204 aaKnown RBP7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 ALFQ53S48 1182 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 TDRD12Q587J7 1177 aaKnown RBP7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 PITRM1Q5JRX3 1037 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 ACAD10Q6JQN1 1059 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 WDR59Q6PJI9 974 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 SERPINA13PQ6UXR4 307 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 SND1Q7KZF4 910 aaKnown RBP eCLIP7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 ARMCX6Q7L4S7 300 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 BNIPLQ7Z465 357 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 TRMT11Q7Z4G4 463 aaKnown RBP7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 KIAA0907Q7Z7F0 614 aaPredicted RBP7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 MCOLN2Q8IZK6 566 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 APCDD1Q8J025 514 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 AHI1Q8N157 1196 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 CCAR2Q8N163 923 aaKnown RBP7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 DEFB119Q8N690 84 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 CCDC185Q8N715 623 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 C3orf20Q8ND61 904 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 KCNV2Q8TDN2 545 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 FAM172AQ8WUF8 416 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 DDX50Q9BQ39 737 aaKnown RBP7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 SELENOOQ9BVL4 669 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 SLC2A11Q9BYW1 496 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 SMOC1Q9H4F8 434 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 WDCPQ9H6R7 721 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 POLMQ9NP87 494 aaPredicted RBP7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 ARHGEF38Q9NXL2 777 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 AIPL1Q9NZN9 384 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 NCDNQ9UBB6 729 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 EBF1Q9UH73 591 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 SLC12A6Q9UHW9 1150 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 MYO6Q9UM54 1294 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 CFAP54Q96N23 3096 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 DNAH14Q0VDD8 3507 aa7.92□□□□□ -1.14
HMGB3P1-201ENST00000393368 A0A1W2PQJ5 194 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 CCP110O43303 1012 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 SRGAP2O75044 1071 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 ALDH1A2O94788 518 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 CALB1P05937 261 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 EPHX1P07099 455 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 CCDC172P0C7W6 258 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 GPD1P21695 349 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 PRKCIP41743 596 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 STK19P49842 368 aaPredicted RBP7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 HDAC4P56524 1084 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 GSCP56915 257 aaPredicted RBP7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 SPEM2Q0P670 501 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 EIF4HQ15056 248 aaKnown RBP7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 MAP7D1Q3KQU3 841 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 HSF5Q4G112 596 aaPredicted RBP7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 FIGNQ5HY92 759 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 BRMS1LQ5PSV4 323 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 RABGAP1LQ5R372 815 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 PPP1R15BQ5SWA1 713 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 MPP7Q5T2T1 576 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 ARTNQ5T4W7 220 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 HGSNATQ68CP4 663 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 SDE2Q6IQ49 451 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 CXorf57Q6NSI4 855 aaKnown RBP7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 KIAA1324Q6UXG2 1013 aaKnown RBP7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 TFAP2DQ7Z6R9 452 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 KIAA2013Q8IYS2 634 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 ZNF683Q8IZ20 524 aa7.91□□□□□ -1.14
HMGB3P1-201ENST00000393368 FIBINQ8TAL6 211 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms