RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 TBC1D3DA0A087WVF3 549 aa4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 TBC1D3IA0A087WXS9 549 aa4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 TBC1D3EA0A087X179 549 aa4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 TBC1D3KA0A087X1G2 549 aa4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 TBC1D3BA6NDS4 549 aa4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 TBC1D3FA6NER0 549 aaPredicted RBP4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 MBD3L5A6NJ08 208 aaPredicted RBP4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 SLC38A8A6NNN8 435 aa4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 TBC1D3LB9A6J9 549 aa4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 UGDHO60701 494 aa4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 TNFRSF6BO95407 300 aa4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 ALDOCP09972 364 aaKnown RBP4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 TBC1D3HP0C7X1 549 aa4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 ALDH7A1P49419 539 aaKnown RBP4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 SHC2P98077 582 aa4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 GALNT1Q10472 559 aaPredicted RBP4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 BTBD16Q32M84 506 aa4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 TBRG1Q3YBR2 411 aa4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 ZNF260Q3ZCT1 412 aa4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 KIAA1755Q5JYT7 1200 aa4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 TBC1D3GQ6DHY5 549 aa4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 TBC1D3CQ6IPX1 549 aa4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 NFRKBQ6P4R8 1299 aa4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 GGT6Q6P531 493 aa4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 LRIG3Q6UXM1 1119 aa4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 TECPR1Q7Z6L1 1165 aa4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 MYLK4Q86YV6 388 aaPredicted RBP4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 TBC1D3Q8IZP1 549 aaPredicted RBP4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 ZNF548Q8NEK5 533 aaPredicted RBP4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 HMGB4Q8WW32 186 aa4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 NAF1Q96HR8 494 aaKnown RBP4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 NPAS1Q99742 590 aa4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 CRB3Q9BUF7 120 aa4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 MECRQ9BV79 373 aa4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 THSD1Q9NS62 852 aa4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 LIN7CQ9NUP9 197 aaKnown RBP4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 MSRB1Q9NZV6 116 aa4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 PCDHA12Q9UN75 941 aa4.09□□□□□ -1.75
SNORA40.3-201ENST00000390964 A0A0G2JK05 382 aa4.08□□□□□ -1.76
SNORA40.3-201ENST00000390964 IGLV5-39A0A0G2JS06 123 aa4.08□□□□□ -1.76
SNORA40.3-201ENST00000390964 DPPA5A6NC42 116 aa4.08□□□□□ -1.76
SNORA40.3-201ENST00000390964 KCNAB3O43448 404 aa4.08□□□□□ -1.76
SNORA40.3-201ENST00000390964 OAZ2O95190 189 aa4.08□□□□□ -1.76
SNORA40.3-201ENST00000390964 WNT1P04628 370 aa4.08□□□□□ -1.76
SNORA40.3-201ENST00000390964 FGF2P09038 288 aa4.08□□□□□ -1.76
SNORA40.3-201ENST00000390964 PSG1P11464 419 aa4.08□□□□□ -1.76
SNORA40.3-201ENST00000390964 POLGP54098 1239 aaPredicted RBP4.08□□□□□ -1.76
SNORA40.3-201ENST00000390964 ADPRHP54922 357 aa4.08□□□□□ -1.76
SNORA40.3-201ENST00000390964 FAM3BP58499 235 aaPredicted RBP4.08□□□□□ -1.76
SNORA40.3-201ENST00000390964 MANEAQ5SRI9 462 aa4.08□□□□□ -1.76
SNORA40.3-201ENST00000390964 ERAP2Q6P179 960 aa4.08□□□□□ -1.76
SNORA40.3-201ENST00000390964 C1orf228Q6PIY5 440 aa4.08□□□□□ -1.76
SNORA40.3-201ENST00000390964 RAB11FIP2Q7L804 512 aa4.08□□□□□ -1.76
SNORA40.3-201ENST00000390964 SLC44A2Q8IWA5 706 aaPredicted RBP4.08□□□□□ -1.76
SNORA40.3-201ENST00000390964 SPICE1Q8N0Z3 855 aa4.08□□□□□ -1.76
SNORA40.3-201ENST00000390964 OR1N1Q8NGS0 311 aa4.08□□□□□ -1.76
SNORA40.3-201ENST00000390964 NSMCE1Q8WV22 266 aa4.08□□□□□ -1.76
SNORA40.3-201ENST00000390964 ATP2A3Q93084 1043 aa4.08□□□□□ -1.76
SNORA40.3-201ENST00000390964 RMDN3Q96TC7 470 aa4.08□□□□□ -1.76
SNORA40.3-201ENST00000390964 WDR83Q9BRX9 315 aaKnown RBP4.08□□□□□ -1.76
SNORA40.3-201ENST00000390964 TXNRD2Q9NNW7 524 aa4.08□□□□□ -1.76
SNORA40.3-201ENST00000390964 PRDM8Q9NQV8 689 aa4.08□□□□□ -1.76
SNORA40.3-201ENST00000390964 ZBTB40Q9NUA8 1239 aa4.08□□□□□ -1.76
SNORA40.3-201ENST00000390964 DECR2Q9NUI1 292 aa4.08□□□□□ -1.76
SNORA40.3-201ENST00000390964 CACNA1IQ9P0X4 2223 aa4.08□□□□□ -1.76
SNORA40.3-201ENST00000390964 SLC8A2Q9UPR5 921 aa4.08□□□□□ -1.76
SNORA40.3-201ENST00000390964 LAMP3Q9UQV4 416 aa4.08□□□□□ -1.76
SNORA40.3-201ENST00000390964 COPG1Q9Y678 874 aaKnown RBP4.08□□□□□ -1.76
SNORA40.3-201ENST00000390964 FAM90A10PA6NDY2 464 aa4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 KCNJ18B7U540 433 aa4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 F5H423 210 aaPredicted RBP4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 ATG13O75143 517 aa4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 ACTL6BO94805 426 aa4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 EPN2O95208 641 aa4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 NTN1O95631 604 aa4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 CSTBP04080 98 aaKnown RBP4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 GYS1P13807 737 aa4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 SCP2P22307 547 aa4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 FOXG1P55316 489 aaPredicted RBP4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 AP2B1P63010 937 aa4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 FOXO1Q12778 655 aa4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 MAPK7Q13164 816 aa4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 INPP5JQ15735 1006 aaPredicted RBP4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 SMTNL2Q2TAL5 461 aa4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 PIK3CD-AS1Q5SR53 167 aa4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 TANGO2Q6ICL3 276 aa4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 KLHL17Q6TDP4 642 aa4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 COLCA1Q6ZS62 124 aa4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 DDIASQ8IXT1 998 aa4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 ATG16L2Q8NAA4 619 aa4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 MSI2Q96DH6 328 aaKnown RBP4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 TMEM120AQ9BXJ8 343 aa4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 OSBPL5Q9H0X9 879 aaPredicted RBP4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 PABPC3Q9H361 631 aaKnown RBP4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 DACT1Q9NYF0 836 aa4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 UTS2RQ9UKP6 389 aa4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 C19orf53Q9UNZ5 99 aaPredicted RBP4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 TNFSF13BQ9Y275 285 aa4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 DAAM1Q9Y4D1 1078 aa4.07□□□□□ -1.76
SNORA40.3-201ENST00000390964 TTC3P53804 2025 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms