RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 C16orf89Q6UX73 402 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 BBS12Q6ZW61 710 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 DSELQ8IZU8 1212 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 KYQ8NBH2 561 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 PDCD6IPQ8WUM4 868 aaKnown RBP15.03■□□□□ -0
VPS9D1-201ENST00000389386 ATP2A3Q93084 1043 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 FAM84AQ96KN4 292 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 C1orf112Q9NSG2 853 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 GPRC5DQ9NZD1 345 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 FEM1BQ9UK73 627 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 PLOD2O00469 737 aa15.02■□□□□ -0
VPS9D1-201ENST00000389386 BCAS2O75934 225 aaPredicted RBP15.02■□□□□ -0
VPS9D1-201ENST00000389386 SERPINE1P05121 402 aa15.02■□□□□ -0
VPS9D1-201ENST00000389386 P4HA1P13674 534 aa15.02■□□□□ -0
VPS9D1-201ENST00000389386 PKNOX1P55347 436 aa15.02■□□□□ -0
VPS9D1-201ENST00000389386 INAQ16352 499 aa15.02■□□□□ -0
VPS9D1-201ENST00000389386 CYP2A13Q16696 494 aa15.02■□□□□ -0
VPS9D1-201ENST00000389386 STXBP5Q5T5C0 1151 aa15.02■□□□□ -0
VPS9D1-201ENST00000389386 TANKQ92844 425 aa15.02■□□□□ -0
VPS9D1-201ENST00000389386 DOK1Q99704 481 aa15.02■□□□□ -0
VPS9D1-201ENST00000389386 TBC1D22BQ9NU19 505 aa15.02■□□□□ -0
VPS9D1-201ENST00000389386 ZC3H7BQ9UGR2 993 aaKnown RBP15.02■□□□□ -0
VPS9D1-201ENST00000389386 AGTPBP1Q9UPW5 1226 aa15.02■□□□□ -0
VPS9D1-201ENST00000389386 COL2A1P02458 1487 aaPredicted RBP15.02■□□□□ -0
VPS9D1-201ENST00000389386 A0A087WXM4 84 aa15.02□□□□□ -0.01
VPS9D1-201ENST00000389386 A0A1W2PPW3 197 aa15.02□□□□□ -0.01
VPS9D1-201ENST00000389386 H3BMQ9 156 aa15.02□□□□□ -0.01
VPS9D1-201ENST00000389386 AQP9O43315 295 aa15.02□□□□□ -0.01
VPS9D1-201ENST00000389386 ZC3H11AO75152 810 aaKnown RBP eCLIP15.02□□□□□ -0.01
VPS9D1-201ENST00000389386 KPNA1P52294 538 aaPredicted RBP15.02□□□□□ -0.01
VPS9D1-201ENST00000389386 YWHAZP63104 245 aaKnown RBP15.02□□□□□ -0.01
VPS9D1-201ENST00000389386 RGS21Q2M5E4 152 aa15.02□□□□□ -0.01
VPS9D1-201ENST00000389386 PPP6R3Q5H9R7 873 aaPredicted RBP15.02□□□□□ -0.01
VPS9D1-201ENST00000389386 C6orf183Q5T699 404 aa15.02□□□□□ -0.01
VPS9D1-201ENST00000389386 SPOPLQ6IQ16 392 aa15.02□□□□□ -0.01
VPS9D1-201ENST00000389386 EEPD1Q7L9B9 569 aa15.02□□□□□ -0.01
VPS9D1-201ENST00000389386 FAM83AQ86UY5 434 aa15.02□□□□□ -0.01
VPS9D1-201ENST00000389386 ADAMTS16Q8TE57 1224 aa15.02□□□□□ -0.01
VPS9D1-201ENST00000389386 MFSD14AQ96MC6 490 aa15.02□□□□□ -0.01
VPS9D1-201ENST00000389386 COG8Q96MW5 612 aa15.02□□□□□ -0.01
VPS9D1-201ENST00000389386 TEPSINQ96N21 525 aa15.02□□□□□ -0.01
VPS9D1-201ENST00000389386 POPDC2Q9HBU9 364 aa15.02□□□□□ -0.01
VPS9D1-201ENST00000389386 KCNH7Q9NS40 1196 aa15.02□□□□□ -0.01
VPS9D1-201ENST00000389386 GGA3Q9NZ52 723 aa15.02□□□□□ -0.01
VPS9D1-201ENST00000389386 ERGIC3Q9Y282 383 aa15.02□□□□□ -0.01
VPS9D1-201ENST00000389386 J3QRK9 145 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 MYCLP12524 364 aaPredicted RBP15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 SEPT6Q14141 434 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 FGD3Q5JSP0 725 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 FAM160B2Q86V87 743 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 GPC2Q8N158 579 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 FBXL8Q96CD0 374 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 MCEEQ96PE7 176 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 GID8Q9NWU2 228 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 GPR25O00155 361 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 ACOT8O14734 319 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 MCF2LO15068 1137 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 KLHL41O60662 606 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 ACO1P21399 889 aaKnown RBP15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 RPL10P27635 214 aaKnown RBP15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 ATXN3P54252 364 aaPredicted RBP15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 SLC10A2Q12908 348 aaPredicted RBP15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 NR1D2Q14995 579 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 TIFABQ6ZNK6 161 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 SETD3Q86TU7 594 aaPredicted RBP15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 MYO1HQ8N1T3 1032 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 PCYOX1LQ8NBM8 494 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 CLEC4DQ8WXI8 215 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 TAAR1Q96RJ0 339 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 CCDC68Q9H2F9 335 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 ST6GALNAC4Q9H4F1 302 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 CXorf21Q9HAI6 301 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 ATAD3AQ9NVI7 634 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 CORINQ9Y5Q5 1042 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 CROCCQ5TZA2 2017 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 TRIM64BA6NI03 449 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 GIPC1O14908 333 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 SLC16A4O15374 487 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 MMP8P22894 467 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 GRK2P25098 689 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 NUMBP49757 651 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 EIF3EP60228 445 aaKnown RBP15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 BNIP3Q12983 259 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 SMUG1Q53HV7 270 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 IL23RQ5VWK5 629 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 ANKRD26P1Q6NSI1 321 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 EPGNQ6UW88 154 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 IQCF2Q8IXL9 164 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 RNF148Q8N7C7 305 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 ZNF420Q8TAQ5 688 aaPredicted RBP15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 MXRA8Q9BRK3 442 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 TEKT3Q9BXF9 490 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 TDRD1Q9BXT4 1180 aaKnown RBP15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 ANKRD60Q9BZ19 345 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 DRC3Q9H069 523 aa15.01□□□□□ -0.01
VPS9D1-201ENST00000389386 TCRBV5S1A1TA0A578 114 aa15□□□□□ -0.01
VPS9D1-201ENST00000389386 KRBA1A5PL33 1030 aa15□□□□□ -0.01
VPS9D1-201ENST00000389386 FAM155AB1AL88 458 aaPredicted RBP15□□□□□ -0.01
VPS9D1-201ENST00000389386 APOEP02649 317 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms