RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 RAB6CQ9H0N0 254 aa14.21□□□□□ -0.13
SDC1-202ENST00000381150 DNAJB4Q9UDY4 337 aa14.21□□□□□ -0.13
SDC1-202ENST00000381150 KRT7P08729 469 aa14.21□□□□□ -0.14
SDC1-202ENST00000381150 IDH3AP50213 366 aa14.21□□□□□ -0.14
SDC1-202ENST00000381150 CELF3Q5SZQ8 465 aaKnown RBP14.21□□□□□ -0.14
SDC1-202ENST00000381150 CPNE9Q8IYJ1 553 aa14.21□□□□□ -0.14
SDC1-202ENST00000381150 WDTC1Q8N5D0 677 aa14.21□□□□□ -0.14
SDC1-202ENST00000381150 THAP11Q96EK4 314 aa14.21□□□□□ -0.14
SDC1-202ENST00000381150 MRPL4Q9BYD3 311 aaKnown RBP14.21□□□□□ -0.14
SDC1-202ENST00000381150 SELENONQ9NZV5 590 aa14.21□□□□□ -0.14
SDC1-202ENST00000381150 TRIM43BA6NCK2 446 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 TPP1O14773 563 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 ATP9BO43861 1147 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 MIPP30301 263 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 AP3M2P53677 418 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 MYL6P60660 151 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 LAYNQ6UX15 382 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 CYP2R1Q6VVX0 501 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 PLPPR4Q7Z2D5 763 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 PATL1Q86TB9 770 aaKnown RBP14.2□□□□□ -0.14
SDC1-202ENST00000381150 MTMR12Q9C0I1 747 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 DHX35Q9H5Z1 703 aaKnown RBP14.2□□□□□ -0.14
SDC1-202ENST00000381150 RSL24D1Q9UHA3 163 aaKnown RBP14.2□□□□□ -0.14
SDC1-202ENST00000381150 SNX13Q9Y5W8 968 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 CSADQ9Y600 493 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 TPST1O60507 370 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 HOXC6P09630 235 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 AOC1P19801 751 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 EPHA3P29320 983 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 MLH1P40692 756 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 THOP1P52888 689 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 WASHC5Q12768 1159 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 IL31Q6EBC2 164 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 UNC5AQ6ZN44 842 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 CMC1Q7Z7K0 106 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 KIAA0319LQ8IZA0 1049 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 ADGRF2Q8IZF7 708 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 TMEM130Q8N3G9 435 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 LRRC71Q8N4P6 559 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 ZNF778Q96MU6 729 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 PKP2Q99959 881 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 TMEM79Q9BSE2 394 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 TUT1Q9H6E5 874 aaKnown RBP14.2□□□□□ -0.14
SDC1-202ENST00000381150 ELP3Q9H9T3 547 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 SEPT10Q9P0V9 454 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 SIRPGQ9P1W8 387 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 TEX264Q9Y6I9 313 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 CEP350Q5VT06 3117 aa14.2□□□□□ -0.14
SDC1-202ENST00000381150 ARHGEF37A1IGU5 675 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 OGTO15294 1046 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 P4HA1P13674 534 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 PLOD1Q02809 727 aaPredicted RBP14.19□□□□□ -0.14
SDC1-202ENST00000381150 SFSWAPQ12872 951 aaKnown RBP14.19□□□□□ -0.14
SDC1-202ENST00000381150 TBCCQ15814 346 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 FAM102AQ5T9C2 384 aaPredicted RBP14.19□□□□□ -0.14
SDC1-202ENST00000381150 DRICH1Q6PGQ1 229 aaPredicted RBP14.19□□□□□ -0.14
SDC1-202ENST00000381150 C16orf87Q6PH81 154 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 FASTKD5Q7L8L6 764 aaKnown RBP14.19□□□□□ -0.14
SDC1-202ENST00000381150 RIN3Q8TB24 985 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 FAM167AQ96KS9 214 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 MRPS26Q9BYN8 205 aaKnown RBP14.19□□□□□ -0.14
SDC1-202ENST00000381150 KLC2Q9H0B6 622 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 XYLT2Q9H1B5 865 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 THEGQ9P2T0 379 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 POLIQ9UNA4 740 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 PSMD13Q9UNM6 376 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 RBMX2Q9Y388 322 aaKnown RBP14.19□□□□□ -0.14
SDC1-202ENST00000381150 TTLL3Q9Y4R7 772 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 SF3B1O75533 1304 aaKnown RBP eCLIP14.19□□□□□ -0.14
SDC1-202ENST00000381150 GIPC1O14908 333 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 APOEP02649 317 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 RALBP11234 206 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 PGGT1BP53609 377 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 SLC5A3P53794 718 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 CDH8P55286 799 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 BCAR1P56945 870 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 MXD4Q14582 209 aaPredicted RBP14.19□□□□□ -0.14
SDC1-202ENST00000381150 C15orf59Q2T9L4 293 aaPredicted RBP14.19□□□□□ -0.14
SDC1-202ENST00000381150 TEX44Q53QW1 395 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 DENND1BQ6P3S1 775 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 RNF149Q8NC42 400 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 OTUD5Q96G74 571 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 ZFRQ96KR1 1074 aaKnown RBP14.19□□□□□ -0.14
SDC1-202ENST00000381150 NUF2Q9BZD4 464 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 FZD8Q9H461 694 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 NRDE2Q9H7Z3 1164 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 COG4Q9H9E3 785 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 ADARB2Q9NS39 739 aaKnown RBP14.19□□□□□ -0.14
SDC1-202ENST00000381150 PDLIM1O00151 329 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 ZBTB14O43829 449 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 CCNT2O60583 730 aaKnown RBP14.19□□□□□ -0.14
SDC1-202ENST00000381150 ITGBL1O95965 494 aaPredicted RBP14.19□□□□□ -0.14
SDC1-202ENST00000381150 MX2P20592 715 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 ADORA2AP29274 412 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 SNAPC2Q13487 334 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 SLC9B1Q4ZJI4 515 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 TMEM198Q66K66 360 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 MOB2Q70IA6 237 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 SNX31Q8N9S9 440 aa14.19□□□□□ -0.14
SDC1-202ENST00000381150 ZBTB8BQ8NAP8 495 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms