RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 SLC34A2O95436 690 aa13.06□□□□□ -0.32
SMN1-202ENST00000380707 FTCDO95954 541 aa13.06□□□□□ -0.32
SMN1-202ENST00000380707 CTHP32929 405 aa13.06□□□□□ -0.32
SMN1-202ENST00000380707 ZXDAP98168 799 aa13.06□□□□□ -0.32
SMN1-202ENST00000380707 MESP2Q0VG99 397 aa13.06□□□□□ -0.32
SMN1-202ENST00000380707 ALFQ53S48 1182 aa13.06□□□□□ -0.32
SMN1-202ENST00000380707 LRRC38Q5VT99 294 aa13.06□□□□□ -0.32
SMN1-202ENST00000380707 RWDD4Q6NW29 188 aaKnown RBP13.06□□□□□ -0.32
SMN1-202ENST00000380707 TXNDC11Q6PKC3 985 aa13.06□□□□□ -0.32
SMN1-202ENST00000380707 NT5DC3Q86UY8 548 aa13.06□□□□□ -0.32
SMN1-202ENST00000380707 RHOT1Q8IXI2 618 aa13.06□□□□□ -0.32
SMN1-202ENST00000380707 ETFBKMTQ8IXQ9 262 aa13.06□□□□□ -0.32
SMN1-202ENST00000380707 SYCE1Q8N0S2 351 aa13.06□□□□□ -0.32
SMN1-202ENST00000380707 KRT35Q92764 455 aa13.06□□□□□ -0.32
SMN1-202ENST00000380707 PPARGC1AQ9UBK2 798 aaKnown RBP13.06□□□□□ -0.32
SMN1-202ENST00000380707 WNT16Q9UBV4 365 aa13.06□□□□□ -0.32
SMN1-202ENST00000380707 TYW5A2RUC4 315 aaKnown RBP13.05□□□□□ -0.32
SMN1-202ENST00000380707 KRBA1A5PL33 1030 aa13.05□□□□□ -0.32
SMN1-202ENST00000380707 PSTPIP1O43586 416 aa13.05□□□□□ -0.32
SMN1-202ENST00000380707 CD48P09326 243 aa13.05□□□□□ -0.32
SMN1-202ENST00000380707 GLULP15104 373 aa13.05□□□□□ -0.32
SMN1-202ENST00000380707 GOT1P17174 413 aa13.05□□□□□ -0.32
SMN1-202ENST00000380707 OPRD1P41143 372 aa13.05□□□□□ -0.32
SMN1-202ENST00000380707 MARCKSL1P49006 195 aa13.05□□□□□ -0.32
SMN1-202ENST00000380707 ARSEP51690 589 aa13.05□□□□□ -0.32
SMN1-202ENST00000380707 CDH6P55285 790 aa13.05□□□□□ -0.32
SMN1-202ENST00000380707 MLF2Q15773 248 aaPredicted RBP13.05□□□□□ -0.32
SMN1-202ENST00000380707 TTC39BQ5VTQ0 682 aaPredicted RBP13.05□□□□□ -0.32
SMN1-202ENST00000380707 ASTLQ6HA08 431 aaPredicted RBP13.05□□□□□ -0.32
SMN1-202ENST00000380707 PEX26Q7Z412 305 aa13.05□□□□□ -0.32
SMN1-202ENST00000380707 RALGPS2Q86X27 583 aaPredicted RBP13.05□□□□□ -0.32
SMN1-202ENST00000380707 KCTD6Q8NC69 237 aa13.05□□□□□ -0.32
SMN1-202ENST00000380707 FAM71BQ8TC56 605 aa13.05□□□□□ -0.32
SMN1-202ENST00000380707 WFDC5Q8TCV5 224 aa13.05□□□□□ -0.32
SMN1-202ENST00000380707 RAPGEF5Q92565 580 aa13.05□□□□□ -0.32
SMN1-202ENST00000380707 TBC1D31Q96DN5 1066 aa13.05□□□□□ -0.32
SMN1-202ENST00000380707 EPAS1Q99814 870 aa13.05□□□□□ -0.32
SMN1-202ENST00000380707 ZYG11BQ9C0D3 744 aa13.05□□□□□ -0.32
SMN1-202ENST00000380707 C8orf33Q9H7E9 229 aaPredicted RBP13.05□□□□□ -0.32
SMN1-202ENST00000380707 PCDH18Q9HCL0 1135 aa13.05□□□□□ -0.32
SMN1-202ENST00000380707 FBRSL1Q9HCM7 1045 aaKnown RBP13.05□□□□□ -0.32
SMN1-202ENST00000380707 ARHGEF3Q9NR81 526 aa13.05□□□□□ -0.32
SMN1-202ENST00000380707 CWC15Q9P013 229 aaKnown RBP13.05□□□□□ -0.32
SMN1-202ENST00000380707 ZNF212Q9UDV6 495 aa13.05□□□□□ -0.32
SMN1-202ENST00000380707 FBXO10Q9UK96 956 aa13.05□□□□□ -0.32
SMN1-202ENST00000380707 FBXL21Q9UKT6 434 aa13.05□□□□□ -0.32
SMN1-202ENST00000380707 PACSIN2Q9UNF0 486 aaPredicted RBP13.05□□□□□ -0.32
SMN1-202ENST00000380707 A0A1B0GVM2 712 aa13.04□□□□□ -0.32
SMN1-202ENST00000380707 TCAF2A6NFQ2 919 aa13.04□□□□□ -0.32
SMN1-202ENST00000380707 EEF2KO00418 725 aaKnown RBP13.04□□□□□ -0.32
SMN1-202ENST00000380707 DCXO43602 365 aa13.04□□□□□ -0.32
SMN1-202ENST00000380707 TULP3O75386 442 aa13.04□□□□□ -0.32
SMN1-202ENST00000380707 CLDN11O75508 207 aa13.04□□□□□ -0.32
SMN1-202ENST00000380707 CISD3P0C7P0 127 aa13.04□□□□□ -0.32
SMN1-202ENST00000380707 CD72P21854 359 aa13.04□□□□□ -0.32
SMN1-202ENST00000380707 IL4RP24394 825 aa13.04□□□□□ -0.32
SMN1-202ENST00000380707 EPHB2P29323 1055 aa13.04□□□□□ -0.32
SMN1-202ENST00000380707 HOXC13P31276 330 aa13.04□□□□□ -0.32
SMN1-202ENST00000380707 CTNNA1P35221 906 aaKnown RBP13.04□□□□□ -0.32
SMN1-202ENST00000380707 GALK1P51570 392 aa13.04□□□□□ -0.32
SMN1-202ENST00000380707 CDH4P55283 916 aa13.04□□□□□ -0.32
SMN1-202ENST00000380707 DPYSL3Q14195 570 aa13.04□□□□□ -0.32
SMN1-202ENST00000380707 KRT81Q14533 505 aa13.04□□□□□ -0.32
SMN1-202ENST00000380707 HS1BP3Q53T59 392 aa13.04□□□□□ -0.32
SMN1-202ENST00000380707 FSCBQ5H9T9 825 aa13.04□□□□□ -0.32
SMN1-202ENST00000380707 ZFYVE27Q5T4F4 411 aa13.04□□□□□ -0.32
SMN1-202ENST00000380707 TPRG1Q6ZUI0 275 aa13.04□□□□□ -0.32
SMN1-202ENST00000380707 RFX8Q6ZV50 586 aa13.04□□□□□ -0.32
SMN1-202ENST00000380707 TFAP2DQ7Z6R9 452 aa13.04□□□□□ -0.32
SMN1-202ENST00000380707 NLRP14Q86W24 1093 aa13.04□□□□□ -0.32
SMN1-202ENST00000380707 MFN1Q8IWA4 741 aa13.04□□□□□ -0.32
SMN1-202ENST00000380707 SIX5Q8N196 739 aa13.04□□□□□ -0.32
SMN1-202ENST00000380707 C17orf53Q8N3J3 647 aaPredicted RBP13.04□□□□□ -0.32
SMN1-202ENST00000380707 CARNMT1Q8N4J0 409 aa13.04□□□□□ -0.32
SMN1-202ENST00000380707 PIP4P2Q8N4L2 257 aa13.04□□□□□ -0.32
SMN1-202ENST00000380707 TSC1Q92574 1164 aa13.04□□□□□ -0.32
SMN1-202ENST00000380707 EDAQ92838 391 aa13.04□□□□□ -0.32
SMN1-202ENST00000380707 XPO6Q96QU8 1125 aaKnown RBP13.04□□□□□ -0.32
SMN1-202ENST00000380707 DNAJC17Q9NVM6 304 aaKnown RBP13.04□□□□□ -0.32
SMN1-202ENST00000380707 AMFRQ9UKV5 643 aa13.04□□□□□ -0.32
SMN1-202ENST00000380707 WDFY4Q6ZS81 3184 aa13.04□□□□□ -0.32
SMN1-202ENST00000380707 C3orf70A6NLC5 250 aaPredicted RBP13.03□□□□□ -0.32
SMN1-202ENST00000380707 PI4K2BG5E9Z4 385 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 H0Y626 953 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 LUC7L3O95232 432 aaKnown RBP13.03□□□□□ -0.32
SMN1-202ENST00000380707 KDELR1P24390 212 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 EIF2DP41214 584 aaKnown RBP13.03□□□□□ -0.32
SMN1-202ENST00000380707 HCAR3P49019 387 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 PEX5P50542 639 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 TPI1P60174 286 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 AMPD2Q01433 879 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 MMRN1Q13201 1228 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 PON2Q15165 354 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 CHST9Q7L1S5 443 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 PHTF2Q8N3S3 785 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 FIBINQ8TAL6 211 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 CSPG4P5Q96PW8 444 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 ALS2CR12Q96Q35 445 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 P2RY13Q9BPV8 354 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 CALN1Q9BXU9 219 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms