RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 HADHBP55084 474 aaKnown RBP19.34■□□□□ 0.69
SSU72-203ENST00000378725 KDSRQ06136 332 aa19.34■□□□□ 0.69
SSU72-203ENST00000378725 ERMARDQ5T6L9 678 aa19.34■□□□□ 0.69
SSU72-203ENST00000378725 MANEALQ5VSG8 457 aa19.34■□□□□ 0.69
SSU72-203ENST00000378725 NUDT18Q6ZVK8 323 aa19.34■□□□□ 0.69
SSU72-203ENST00000378725 PSTKQ8IV42 348 aaKnown RBP19.34■□□□□ 0.69
SSU72-203ENST00000378725 SFTPA1Q8IWL2 248 aa19.34■□□□□ 0.69
SSU72-203ENST00000378725 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.34■□□□□ 0.69
SSU72-203ENST00000378725 CCDC112Q8NEF3 446 aa19.34■□□□□ 0.69
SSU72-203ENST00000378725 WFDC5Q8TCV5 224 aa19.34■□□□□ 0.69
SSU72-203ENST00000378725 PEBP4Q96S96 227 aa19.34■□□□□ 0.69
SSU72-203ENST00000378725 PCSK1NQ9UHG2 260 aa19.34■□□□□ 0.69
SSU72-203ENST00000378725 USP18Q9UMW8 372 aa19.34■□□□□ 0.69
SSU72-203ENST00000378725 STARD13Q9Y3M8 1113 aa19.34■□□□□ 0.69
SSU72-203ENST00000378725 A0A0A6YYK5 440 aaPredicted RBP19.33■□□□□ 0.68
SSU72-203ENST00000378725 A0A1B0GVM2 712 aa19.33■□□□□ 0.68
SSU72-203ENST00000378725 TCAF2A6NFQ2 919 aa19.33■□□□□ 0.68
SSU72-203ENST00000378725 FAM72CH0Y354 149 aa19.33■□□□□ 0.68
SSU72-203ENST00000378725 PRPSAP2O60256 369 aa19.33■□□□□ 0.68
SSU72-203ENST00000378725 CHRM1P11229 460 aaPredicted RBP19.33■□□□□ 0.68
SSU72-203ENST00000378725 HLA-FP30511 346 aa19.33■□□□□ 0.68
SSU72-203ENST00000378725 L1CAMP32004 1257 aa19.33■□□□□ 0.68
SSU72-203ENST00000378725 IRAK1P51617 712 aa19.33■□□□□ 0.68
SSU72-203ENST00000378725 CDH4P55283 916 aa19.33■□□□□ 0.68
SSU72-203ENST00000378725 KRT83P78385 493 aa19.33■□□□□ 0.68
SSU72-203ENST00000378725 EFHC2Q5JST6 749 aa19.33■□□□□ 0.68
SSU72-203ENST00000378725 FAM72AQ5TYM5 149 aa19.33■□□□□ 0.68
SSU72-203ENST00000378725 FAM72DQ6L9T8 149 aa19.33■□□□□ 0.68
SSU72-203ENST00000378725 MAMSTRQ6ZN01 415 aa19.33■□□□□ 0.68
SSU72-203ENST00000378725 CHST9Q7L1S5 443 aa19.33■□□□□ 0.68
SSU72-203ENST00000378725 FAM72BQ86X60 149 aa19.33■□□□□ 0.68
SSU72-203ENST00000378725 MFN1Q8IWA4 741 aa19.33■□□□□ 0.68
SSU72-203ENST00000378725 CCAR2Q8N163 923 aaKnown RBP19.33■□□□□ 0.68
SSU72-203ENST00000378725 ACRBPQ8NEB7 543 aa19.33■□□□□ 0.68
SSU72-203ENST00000378725 CCDC26Q8TAB7 109 aa19.33■□□□□ 0.68
SSU72-203ENST00000378725 KCNV2Q8TDN2 545 aa19.33■□□□□ 0.68
SSU72-203ENST00000378725 CHRDQ9H2X0 955 aa19.33■□□□□ 0.68
SSU72-203ENST00000378725 RETREG1Q9H6L5 497 aa19.33■□□□□ 0.68
SSU72-203ENST00000378725 RCCD1A6NED2 376 aa19.32■□□□□ 0.68
SSU72-203ENST00000378725 BTNL10A8MVZ5 291 aa19.32■□□□□ 0.68
SSU72-203ENST00000378725 PRRT4C9JH25 899 aa19.32■□□□□ 0.68
SSU72-203ENST00000378725 PJA2O43164 708 aa19.32■□□□□ 0.68
SSU72-203ENST00000378725 TIMM44O43615 452 aa19.32■□□□□ 0.68
SSU72-203ENST00000378725 SRGAP2O75044 1071 aa19.32■□□□□ 0.68
SSU72-203ENST00000378725 CLDN11O75508 207 aa19.32■□□□□ 0.68
SSU72-203ENST00000378725 CNTN5O94779 1100 aa19.32■□□□□ 0.68
SSU72-203ENST00000378725 IL1R2P27930 398 aa19.32■□□□□ 0.68
SSU72-203ENST00000378725 MAN1A1P33908 653 aa19.32■□□□□ 0.68
SSU72-203ENST00000378725 KIR2DL1P43626 348 aaPredicted RBP19.32■□□□□ 0.68
SSU72-203ENST00000378725 SEMA3BQ13214 749 aa19.32■□□□□ 0.68
SSU72-203ENST00000378725 GAS6Q14393 721 aa19.32■□□□□ 0.68
SSU72-203ENST00000378725 GEN1Q17RS7 908 aa19.32■□□□□ 0.68
SSU72-203ENST00000378725 BOLA3Q53S33 107 aa19.32■□□□□ 0.68
SSU72-203ENST00000378725 ALFQ53S48 1182 aa19.32■□□□□ 0.68
SSU72-203ENST00000378725 FSCBQ5H9T9 825 aa19.32■□□□□ 0.68
SSU72-203ENST00000378725 DAB2IPQ5VWQ8 1189 aa19.32■□□□□ 0.68
SSU72-203ENST00000378725 PYROXD2Q8N2H3 581 aa19.32■□□□□ 0.68
SSU72-203ENST00000378725 CARNMT1Q8N4J0 409 aa19.32■□□□□ 0.68
SSU72-203ENST00000378725 ANP32BQ92688 251 aaKnown RBP19.32■□□□□ 0.68
SSU72-203ENST00000378725 PDLIM2Q96JY6 352 aa19.32■□□□□ 0.68
SSU72-203ENST00000378725 IER2Q9BTL4 223 aa19.32■□□□□ 0.68
SSU72-203ENST00000378725 SNRNP25Q9BV90 132 aaKnown RBP19.32■□□□□ 0.68
SSU72-203ENST00000378725 TFR2Q9UP52 801 aa19.32■□□□□ 0.68
SSU72-203ENST00000378725 TBC1D30Q9Y2I9 924 aa19.32■□□□□ 0.68
SSU72-203ENST00000378725 MYOFQ9NZM1 2061 aa19.32■□□□□ 0.68
SSU72-203ENST00000378725 TRIOO75962 3097 aa19.32■□□□□ 0.68
SSU72-203ENST00000378725 CHURC1-FNTBB4DL54 471 aa19.31■□□□□ 0.68
SSU72-203ENST00000378725 H0Y626 953 aa19.31■□□□□ 0.68
SSU72-203ENST00000378725 ARHGAP6O43182 974 aa19.31■□□□□ 0.68
SSU72-203ENST00000378725 LRIG2O94898 1065 aa19.31■□□□□ 0.68
SSU72-203ENST00000378725 TCF4P15884 667 aa19.31■□□□□ 0.68
SSU72-203ENST00000378725 CD70P32970 193 aa19.31■□□□□ 0.68
SSU72-203ENST00000378725 VAV2P52735 878 aa19.31■□□□□ 0.68
SSU72-203ENST00000378725 MRPS21P82921 87 aaKnown RBP19.31■□□□□ 0.68
SSU72-203ENST00000378725 SLC25A11Q02978 314 aaKnown RBP19.31■□□□□ 0.68
SSU72-203ENST00000378725 TMEM215Q68D42 235 aa19.31■□□□□ 0.68
SSU72-203ENST00000378725 ANKS1BQ7Z6G8 1248 aa19.31■□□□□ 0.68
SSU72-203ENST00000378725 CIR1Q86X95 450 aaPredicted RBP19.31■□□□□ 0.68
SSU72-203ENST00000378725 CCDC117Q8IWD4 279 aaPredicted RBP19.31■□□□□ 0.68
SSU72-203ENST00000378725 WFIKKN2Q8TEU8 576 aa19.31■□□□□ 0.68
SSU72-203ENST00000378725 USP33Q8TEY7 942 aa19.31■□□□□ 0.68
SSU72-203ENST00000378725 ZYG11BQ9C0D3 744 aa19.31■□□□□ 0.68
SSU72-203ENST00000378725 ABCB8Q9NUT2 735 aa19.31■□□□□ 0.68
SSU72-203ENST00000378725 KIAA1522Q9P206 1035 aaPredicted RBP19.31■□□□□ 0.68
SSU72-203ENST00000378725 ZNF212Q9UDV6 495 aa19.31■□□□□ 0.68
SSU72-203ENST00000378725 HCN2Q9UL51 889 aa19.31■□□□□ 0.68
SSU72-203ENST00000378725 AP4E1Q9UPM8 1137 aa19.31■□□□□ 0.68
SSU72-203ENST00000378725 NEU3Q9UQ49 428 aa19.31■□□□□ 0.68
SSU72-203ENST00000378725 F5P12259 2224 aa19.31■□□□□ 0.68
SSU72-203ENST00000378725 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.3■□□□□ 0.68
SSU72-203ENST00000378725 ANTXRLA6NF34 631 aa19.3■□□□□ 0.68
SSU72-203ENST00000378725 RNF40O75150 1001 aa19.3■□□□□ 0.68
SSU72-203ENST00000378725 PABPC1P11940 636 aaKnown RBP19.3■□□□□ 0.68
SSU72-203ENST00000378725 HOXC13P31276 330 aa19.3■□□□□ 0.68
SSU72-203ENST00000378725 HTR7P34969 479 aa19.3■□□□□ 0.68
SSU72-203ENST00000378725 PLK1P53350 603 aa19.3■□□□□ 0.68
SSU72-203ENST00000378725 NUBP1P53384 320 aa19.3■□□□□ 0.68
SSU72-203ENST00000378725 OXCT1P55809 520 aa19.3■□□□□ 0.68
SSU72-203ENST00000378725 CCZ1BP86790 482 aa19.3■□□□□ 0.68
SSU72-203ENST00000378725 CCZ1P86791 482 aaPredicted RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms