RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 SLC4A11Q8NBS3 891 aa14.29□□□□□ -0.12
PRPF18-202ENST00000378572 ACRBPQ8NEB7 543 aa14.29□□□□□ -0.12
PRPF18-202ENST00000378572 OR2I1PQ8NGU4 316 aa14.29□□□□□ -0.12
PRPF18-202ENST00000378572 MRGPRX1Q96LB2 322 aa14.29□□□□□ -0.12
PRPF18-202ENST00000378572 PRDM16Q9HAZ2 1276 aa14.29□□□□□ -0.12
PRPF18-202ENST00000378572 LRRC4Q9HBW1 653 aa14.29□□□□□ -0.12
PRPF18-202ENST00000378572 HESX1Q9UBX0 185 aa14.29□□□□□ -0.12
PRPF18-202ENST00000378572 GON4LQ3T8J9 2241 aa14.29□□□□□ -0.12
PRPF18-202ENST00000378572 GFRA2O00451 464 aa14.29□□□□□ -0.12
PRPF18-202ENST00000378572 DDX3XO00571 662 aaKnown RBP eCLIP14.29□□□□□ -0.121e-6■■□□□ 13.6
PRPF18-202ENST00000378572 TOP3BO95985 862 aaKnown RBP14.29□□□□□ -0.12
PRPF18-202ENST00000378572 KLKB1P03952 638 aa14.29□□□□□ -0.12
PRPF18-202ENST00000378572 CISD3P0C7P0 127 aa14.29□□□□□ -0.12
PRPF18-202ENST00000378572 GNSP15586 552 aa14.29□□□□□ -0.12
PRPF18-202ENST00000378572 GNA15P30679 374 aa14.29□□□□□ -0.12
PRPF18-202ENST00000378572 RAD23BP54727 409 aa14.29□□□□□ -0.12
PRPF18-202ENST00000378572 GEN1Q17RS7 908 aa14.29□□□□□ -0.12
PRPF18-202ENST00000378572 WDR45BQ5MNZ6 344 aa14.29□□□□□ -0.12
PRPF18-202ENST00000378572 PEAR1Q5VY43 1037 aaPredicted RBP14.29□□□□□ -0.12
PRPF18-202ENST00000378572 SLC41A1Q8IVJ1 513 aa14.29□□□□□ -0.12
PRPF18-202ENST00000378572 REXO1L1PQ8IX06 675 aa14.29□□□□□ -0.12
PRPF18-202ENST00000378572 SIX6OS1Q8N1H7 587 aa14.29□□□□□ -0.12
PRPF18-202ENST00000378572 RNF139Q8WU17 664 aa14.29□□□□□ -0.12
PRPF18-202ENST00000378572 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.29□□□□□ -0.12
PRPF18-202ENST00000378572 SCNM1Q9BWG6 230 aa14.29□□□□□ -0.12
PRPF18-202ENST00000378572 ULBP1Q9BZM6 244 aa14.29□□□□□ -0.12
PRPF18-202ENST00000378572 MIR1-1HGQ9H1L0 117 aa14.29□□□□□ -0.12
PRPF18-202ENST00000378572 SUSD2Q9UGT4 822 aa14.29□□□□□ -0.12
PRPF18-202ENST00000378572 AGO1Q9UL18 857 aaKnown RBP14.29□□□□□ -0.12
PRPF18-202ENST00000378572 USP3Q9Y6I4 520 aa14.29□□□□□ -0.12
PRPF18-202ENST00000378572 PENKP01210 267 aaPredicted RBP14.28□□□□□ -0.12
PRPF18-202ENST00000378572 ACADMP11310 421 aa14.28□□□□□ -0.12
PRPF18-202ENST00000378572 GZMAP12544 262 aa14.28□□□□□ -0.12
PRPF18-202ENST00000378572 CHRNB2P17787 502 aa14.28□□□□□ -0.12
PRPF18-202ENST00000378572 CD6P30203 668 aa14.28□□□□□ -0.12
PRPF18-202ENST00000378572 RDXP35241 583 aaKnown RBP14.28□□□□□ -0.12
PRPF18-202ENST00000378572 VAV2P52735 878 aa14.28□□□□□ -0.12
PRPF18-202ENST00000378572 FMO1Q01740 532 aa14.28□□□□□ -0.12
PRPF18-202ENST00000378572 FUT11Q495W5 492 aa14.28□□□□□ -0.12
PRPF18-202ENST00000378572 SGO2Q562F6 1265 aa14.28□□□□□ -0.12
PRPF18-202ENST00000378572 FYB2Q5VWT5 728 aa14.28□□□□□ -0.12
PRPF18-202ENST00000378572 ALKBH5Q6P6C2 394 aaKnown RBP14.28□□□□□ -0.12
PRPF18-202ENST00000378572 TRIM72Q6ZMU5 477 aa14.28□□□□□ -0.12
PRPF18-202ENST00000378572 SLC20A1Q8WUM9 679 aa14.28□□□□□ -0.12
PRPF18-202ENST00000378572 FOXJ1Q92949 421 aa14.28□□□□□ -0.12
PRPF18-202ENST00000378572 PPP1R13BQ96KQ4 1090 aa14.28□□□□□ -0.12
PRPF18-202ENST00000378572 KIAA1257Q9ULG3 409 aa14.28□□□□□ -0.12
PRPF18-202ENST00000378572 PI4KAP42356 2102 aa14.28□□□□□ -0.12
PRPF18-202ENST00000378572 ASCC3Q8N3C0 2202 aaKnown RBP14.27□□□□□ -0.12
PRPF18-202ENST00000378572 ARHGAP33O14559 1287 aa14.27□□□□□ -0.12
PRPF18-202ENST00000378572 PJA2O43164 708 aa14.27□□□□□ -0.12
PRPF18-202ENST00000378572 HYAL3O43820 417 aaPredicted RBP14.27□□□□□ -0.12
PRPF18-202ENST00000378572 TSPAN3O60637 253 aa14.27□□□□□ -0.12
PRPF18-202ENST00000378572 ZBED1O96006 694 aa14.27□□□□□ -0.12
PRPF18-202ENST00000378572 MAOBP27338 520 aa14.27□□□□□ -0.12
PRPF18-202ENST00000378572 IL12RB1P42701 662 aa14.27□□□□□ -0.12
PRPF18-202ENST00000378572 MAGEA1P43355 309 aa14.27□□□□□ -0.12
PRPF18-202ENST00000378572 HARS2P49590 506 aaKnown RBP14.27□□□□□ -0.12
PRPF18-202ENST00000378572 BCAT1P54687 386 aa14.27□□□□□ -0.12
PRPF18-202ENST00000378572 ADIGQ0VDE8 80 aa14.27□□□□□ -0.12
PRPF18-202ENST00000378572 E2F5Q15329 346 aa14.27□□□□□ -0.12
PRPF18-202ENST00000378572 ARHGAP17Q68EM7 881 aa14.27□□□□□ -0.12
PRPF18-202ENST00000378572 PPP1R2P3Q6NXS1 205 aa14.27□□□□□ -0.12
PRPF18-202ENST00000378572 SERPINA13PQ6UXR4 307 aa14.27□□□□□ -0.12
PRPF18-202ENST00000378572 ANKRD52Q8NB46 1076 aa14.27□□□□□ -0.12
PRPF18-202ENST00000378572 NDRG1Q92597 394 aaKnown RBP14.27□□□□□ -0.12
PRPF18-202ENST00000378572 PRCCQ92733 491 aaPredicted RBP14.27□□□□□ -0.12
PRPF18-202ENST00000378572 PLD4Q96BZ4 506 aa14.27□□□□□ -0.12
PRPF18-202ENST00000378572 TOE1Q96GM8 510 aaKnown RBP14.27□□□□□ -0.12
PRPF18-202ENST00000378572 GPR174Q9BXC1 333 aa14.27□□□□□ -0.12
PRPF18-202ENST00000378572 CAPN10Q9HC96 672 aa14.27□□□□□ -0.12
PRPF18-202ENST00000378572 ACP6Q9NPH0 428 aa14.27□□□□□ -0.12
PRPF18-202ENST00000378572 TSPAN16Q9UKR8 245 aa14.27□□□□□ -0.12
PRPF18-202ENST00000378572 INTUQ9ULD6 942 aa14.27□□□□□ -0.12
PRPF18-202ENST00000378572 SLC27A6Q9Y2P4 619 aa14.27□□□□□ -0.12
PRPF18-202ENST00000378572 PCDHA13Q9Y5I0 950 aa14.27□□□□□ -0.12
PRPF18-202ENST00000378572 USP27XA6NNY8 438 aa14.27□□□□□ -0.13
PRPF18-202ENST00000378572 EPHX1P07099 455 aa14.27□□□□□ -0.13
PRPF18-202ENST00000378572 MMEP08473 750 aa14.27□□□□□ -0.13
PRPF18-202ENST00000378572 NCAM1P13591 858 aa14.27□□□□□ -0.13
PRPF18-202ENST00000378572 PDE4CQ08493 712 aa14.27□□□□□ -0.13
PRPF18-202ENST00000378572 CCDC122Q5T0U0 273 aa14.27□□□□□ -0.13
PRPF18-202ENST00000378572 C17orf53Q8N3J3 647 aaPredicted RBP14.27□□□□□ -0.13
PRPF18-202ENST00000378572 ZCCHC9Q8N567 271 aaKnown RBP14.27□□□□□ -0.13
PRPF18-202ENST00000378572 UBA3Q8TBC4 463 aa14.27□□□□□ -0.13
PRPF18-202ENST00000378572 ZNF606Q8WXB4 792 aa14.27□□□□□ -0.13
PRPF18-202ENST00000378572 SORCS1Q8WY21 1168 aa14.27□□□□□ -0.13
PRPF18-202ENST00000378572 SNX19Q92543 992 aa14.27□□□□□ -0.13
PRPF18-202ENST00000378572 EDEM1Q92611 657 aa14.27□□□□□ -0.13
PRPF18-202ENST00000378572 SIPA1Q96FS4 1042 aa14.27□□□□□ -0.13
PRPF18-202ENST00000378572 OLA1Q9NTK5 396 aaKnown RBP14.27□□□□□ -0.13
PRPF18-202ENST00000378572 TRMT1Q9NXH9 659 aaKnown RBP14.27□□□□□ -0.13
PRPF18-202ENST00000378572 THAP10Q9P2Z0 257 aaPredicted RBP14.27□□□□□ -0.13
PRPF18-202ENST00000378572 PCDHGC3Q9UN70 934 aa14.27□□□□□ -0.13
PRPF18-202ENST00000378572 PCDHB9Q9Y5E1 797 aa14.27□□□□□ -0.13
PRPF18-202ENST00000378572 TULP2O00295 520 aa14.26□□□□□ -0.13
PRPF18-202ENST00000378572 XPO1O14980 1071 aaKnown RBP14.26□□□□□ -0.13
PRPF18-202ENST00000378572 NPC1O15118 1278 aa14.26□□□□□ -0.13
PRPF18-202ENST00000378572 THAP12O43422 761 aa14.26□□□□□ -0.13
PRPF18-202ENST00000378572 MED7O43513 233 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms