RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 CDKL3Q8IVW4 592 aaPredicted RBP8.33□□□□□ -1.08
CKAP2-203ENST00000378037 ARFGAP1Q8N6T3 406 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 MAB21L3Q8N8X9 362 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 OR10T2Q8NGX3 314 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 SREK1Q8WXA9 508 aaKnown RBP8.33□□□□□ -1.08
CKAP2-203ENST00000378037 ATP6V1E2Q96A05 226 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 ESAMQ96AP7 390 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 SMARCD1Q96GM5 515 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 SMIM14Q96QK8 99 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 HBEGFQ99075 208 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 CIPCQ9C0C6 399 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 CCSER2Q9H7U1 834 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 HAO1Q9UJM8 370 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 FAM50BQ9Y247 325 aa8.33□□□□□ -1.08
CKAP2-203ENST00000378037 APOC4-APOC2K7ER74 178 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 LYPLA1O75608 230 aaPredicted RBP8.32□□□□□ -1.08
CKAP2-203ENST00000378037 HSPA4LO95757 839 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 APOC2P02655 101 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 KCNQ1P51787 676 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 PEX6Q13608 980 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 LPIN1Q14693 890 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 PDCD2Q16342 344 aaPredicted RBP8.32□□□□□ -1.08
CKAP2-203ENST00000378037 ANKRD20A2Q5SQ80 823 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 ANKRD20A1Q5TYW2 823 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 ZNF280DQ6N043 979 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 STRA8Q7Z7C7 330 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 GANCQ8TET4 914 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 ELMO2Q96JJ3 720 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 FAM161BQ96MY7 647 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 EPN3Q9H201 632 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 ADAMTS10Q9H324 1103 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 FAM96AQ9H5X1 160 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 PFDN4Q9NQP4 134 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 ENTPD7Q9NQZ7 604 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 DDX20Q9UHI6 824 aaKnown RBP8.32□□□□□ -1.08
CKAP2-203ENST00000378037 IQANK1A0A1B0GTG1 560 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 TCRBV9S1A1TA0A576 114 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 OR51F1A6NGY5 319 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 ERI2A8K979 691 aaKnown RBP8.32□□□□□ -1.08
CKAP2-203ENST00000378037 ZBTB24O43167 697 aaPredicted RBP8.32□□□□□ -1.08
CKAP2-203ENST00000378037 TLR5O60602 858 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 PAGE1O75459 146 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 ALDH1A3P47895 512 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 TAP1Q03518 808 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 CNGA3Q16281 694 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 TMEM173Q86WV6 379 aaPredicted RBP8.32□□□□□ -1.08
CKAP2-203ENST00000378037 RFWD2Q8NHY2 731 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 MYOCQ99972 504 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 CORO1BQ9BR76 489 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 COLEC11Q9BWP8 271 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 DUSP16Q9BY84 665 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 TBC1D13Q9NVG8 400 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 PAK5Q9P286 719 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 SSX2IPQ9Y2D8 614 aa8.32□□□□□ -1.08
CKAP2-203ENST00000378037 CXorf49A8MYA2 514 aaPredicted RBP8.31□□□□□ -1.08
CKAP2-203ENST00000378037 CKBP12277 381 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 CTPS1P17812 591 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 GBP1P32455 592 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 CD86P42081 329 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 LHX1P48742 406 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 PGFP49763 221 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 TBX4P57082 545 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 VARS2Q5ST30 1063 aaKnown RBP8.31□□□□□ -1.08
CKAP2-203ENST00000378037 CDCA2Q69YH5 1023 aaPredicted RBP8.31□□□□□ -1.08
CKAP2-203ENST00000378037 OR7D4Q8NG98 312 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 GRIN3AQ8TCU5 1115 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 DQX1Q8TE96 717 aaKnown RBP8.31□□□□□ -1.08
CKAP2-203ENST00000378037 PRCCQ92733 491 aaPredicted RBP8.31□□□□□ -1.08
CKAP2-203ENST00000378037 SERPINB12Q96P63 405 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 AGAP2Q99490 1192 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 SMOQ99835 787 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 PIF1Q9H611 641 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 NDFIP2Q9NV92 336 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 PSMC3IPQ9P2W1 217 aaPredicted RBP8.31□□□□□ -1.08
CKAP2-203ENST00000378037 SRRDQ9UH36 339 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 VPS28Q9UK41 221 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 NBASA2RRP1 2371 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 ATP6AP2A0A1C7CYW4 349 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 MEI4A8MW99 385 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 GJB3O75712 270 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 ATP6AP2O75787 350 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 UBOX5O94941 541 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 CSF2RAP15509 400 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 GKP32189 559 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 TUSC3Q13454 348 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 CDH18Q13634 790 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 ITGA9Q13797 1035 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 CSHL1Q14406 222 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 PTPRRQ15256 657 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 TRIM60Q495X7 471 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 PLPP4Q5VZY2 271 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 SCIMPQ6UWF3 145 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.31□□□□□ -1.08
CKAP2-203ENST00000378037 LRRC8DQ7L1W4 858 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 ZC3H3Q8IXZ2 948 aaKnown RBP8.31□□□□□ -1.08
CKAP2-203ENST00000378037 ALLCQ8N6M5 410 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 MORC4Q8TE76 937 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 SEPT8Q92599 483 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 CAVIN3Q969G5 261 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 ZNF778Q96MU6 729 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms