RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 PPWD1Q96BP3 646 aaKnown RBP11.98□□□□□ -0.49
DDR1-227ENST00000376570 ZFYVE28Q9HCC9 887 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 PIGVQ9NUD9 493 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 FAM105AQ9NUU6 356 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 ARL8BQ9NVJ2 186 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 PSAT1Q9Y617 370 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 ADGRA2Q96PE1 1338 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 ZBTB24O43167 697 aaPredicted RBP11.97□□□□□ -0.49
DDR1-227ENST00000376570 POLBP06746 335 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 CCND1P24385 295 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 TUBP50607 506 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 MAP2K5Q13163 448 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 ARHGAP17Q68EM7 881 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 GLB1LQ6UWU2 654 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 TRIM67Q6ZTA4 783 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 BZW1Q7L1Q6 419 aaKnown RBP11.97□□□□□ -0.49
DDR1-227ENST00000376570 GPRIN1Q7Z2K8 1008 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 FAM228AQ86W67 206 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 NAF1Q96HR8 494 aaKnown RBP11.97□□□□□ -0.49
DDR1-227ENST00000376570 MCM3APO60318 1980 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 NUP205Q92621 2012 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 LAMA2P24043 3122 aaKnown RBP11.97□□□□□ -0.49
DDR1-227ENST00000376570 A0A0U1RQS6 177 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 SLC12A8A0AV02 714 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 DCXO43602 365 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 APOEP02649 317 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 ATICP31939 592 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 RGS2P41220 211 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 OCRLQ01968 901 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 MAP3K10Q02779 954 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 ARMC3Q5W041 872 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 UPF1Q92900 1129 aaKnown RBP eCLIP11.97□□□□□ -0.491e-7■■■■□ 23.7
DDR1-227ENST00000376570 ZNF317Q96PQ6 595 aaPredicted RBP11.97□□□□□ -0.49
DDR1-227ENST00000376570 TRPV6Q9H1D0 765 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 MIOSQ9NXC5 875 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 PLK2Q9NYY3 685 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 DTLQ9NZJ0 730 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 NENFQ9UMX5 172 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 MTA2O94776 668 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 LUC7L3O95232 432 aaKnown RBP11.97□□□□□ -0.49
DDR1-227ENST00000376570 GATMP50440 423 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 CYP1B1Q16678 543 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 SH3D19Q5HYK7 790 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 SPRYD7Q5W111 196 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 FAM219BQ5XKK7 198 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 SCIMPQ6UWF3 145 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 ARHGAP36Q6ZRI8 547 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 TMCO2Q7Z6W1 182 aaPredicted RBP11.97□□□□□ -0.49
DDR1-227ENST00000376570 EBF4Q9BQW3 602 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 TBC1D10AQ9BXI6 508 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 NUF2Q9BZD4 464 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 NMUR2Q9GZQ4 415 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 WDR55Q9H6Y2 383 aaPredicted RBP11.97□□□□□ -0.49
DDR1-227ENST00000376570 PFDN4Q9NQP4 134 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 PADI3Q9ULW8 664 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 GABRQQ9UN88 632 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 RUVBL2Q9Y230 463 aaKnown RBP11.97□□□□□ -0.49
DDR1-227ENST00000376570 SLC4A7Q9Y6M7 1214 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 BRCA2P51587 3418 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 LAMA3Q16787 3333 aa11.97□□□□□ -0.49
DDR1-227ENST00000376570 NRCAMQ92823 1304 aa11.96□□□□□ -0.49
DDR1-227ENST00000376570 COL5A3P25940 1745 aaPredicted RBP11.96□□□□□ -0.49
DDR1-227ENST00000376570 NHSQ6T4R5 1651 aa11.96□□□□□ -0.49
DDR1-227ENST00000376570 USP1O94782 785 aa11.96□□□□□ -0.49
DDR1-227ENST00000376570 PRKAR2AP13861 404 aaKnown RBP11.96□□□□□ -0.49
DDR1-227ENST00000376570 GRM5P41594 1212 aa11.96□□□□□ -0.49
DDR1-227ENST00000376570 KPNB1Q14974 876 aaKnown RBP11.96□□□□□ -0.49
DDR1-227ENST00000376570 SH2D4BQ5SQS7 431 aa11.96□□□□□ -0.49
DDR1-227ENST00000376570 IQSEC1Q6DN90 963 aa11.96□□□□□ -0.49
DDR1-227ENST00000376570 RFWD3Q6PCD5 774 aa11.96□□□□□ -0.49
DDR1-227ENST00000376570 HCSTQ9UBK5 93 aa11.96□□□□□ -0.49
DDR1-227ENST00000376570 SCOCQ9UIL1 159 aa11.96□□□□□ -0.49
DDR1-227ENST00000376570 UBR3Q6ZT12 1888 aa11.96□□□□□ -0.49
DDR1-227ENST00000376570 ZBBXA8MT70 800 aa11.96□□□□□ -0.49
DDR1-227ENST00000376570 HOXA11P31270 313 aaPredicted RBP11.96□□□□□ -0.49
DDR1-227ENST00000376570 XRCC4Q13426 336 aa11.96□□□□□ -0.49
DDR1-227ENST00000376570 MTFR1Q15390 333 aa11.96□□□□□ -0.49
DDR1-227ENST00000376570 OASLQ15646 514 aaKnown RBP11.96□□□□□ -0.49
DDR1-227ENST00000376570 SLC45A4Q5BKX6 768 aa11.96□□□□□ -0.49
DDR1-227ENST00000376570 CACUL1Q86Y37 369 aa11.96□□□□□ -0.49
DDR1-227ENST00000376570 GALNT4Q8N4A0 578 aa11.96□□□□□ -0.49
DDR1-227ENST00000376570 SLC35B2Q8TB61 432 aa11.96□□□□□ -0.49
DDR1-227ENST00000376570 ATP6V1E2Q96A05 226 aa11.96□□□□□ -0.49
DDR1-227ENST00000376570 AGO3Q9H9G7 860 aaKnown RBP11.96□□□□□ -0.49
DDR1-227ENST00000376570 ADAMTS5Q9UNA0 930 aa11.96□□□□□ -0.49
DDR1-227ENST00000376570 CHKBQ9Y259 395 aa11.96□□□□□ -0.49
DDR1-227ENST00000376570 ASGR1P07306 291 aa11.96□□□□□ -0.5
DDR1-227ENST00000376570 NAGLUP54802 743 aa11.96□□□□□ -0.5
DDR1-227ENST00000376570 PKNOX1P55347 436 aa11.96□□□□□ -0.5
DDR1-227ENST00000376570 TWF1Q12792 350 aa11.96□□□□□ -0.5
DDR1-227ENST00000376570 PDK2Q15119 407 aa11.96□□□□□ -0.5
DDR1-227ENST00000376570 CNGA3Q16281 694 aa11.96□□□□□ -0.5
DDR1-227ENST00000376570 TIGD5Q53EQ6 642 aa11.96□□□□□ -0.5
DDR1-227ENST00000376570 RAP1GAP2Q684P5 730 aa11.96□□□□□ -0.5
DDR1-227ENST00000376570 FAM35AQ86V20 835 aa11.96□□□□□ -0.5
DDR1-227ENST00000376570 DNAJC9Q8WXX5 260 aa11.96□□□□□ -0.5
DDR1-227ENST00000376570 FGD4Q96M96 766 aa11.96□□□□□ -0.5
DDR1-227ENST00000376570 CCDC68Q9H2F9 335 aa11.96□□□□□ -0.5
DDR1-227ENST00000376570 ACSS3Q9H6R3 686 aa11.96□□□□□ -0.5
DDR1-227ENST00000376570 DOCK5Q9H7D0 1870 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms