RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 RARGP13631 454 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 NFKB1P19838 968 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 HNF4AP41235 474 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 CACNA2D1P54289 1103 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 GRIK4Q16099 956 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 ATAD3BQ5T9A4 648 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 NPNTQ6UXI9 565 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 WDR49Q8IV35 697 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 TBL1YQ9BQ87 522 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 KLHL28Q9NXS3 571 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 PCDHB12Q9Y5F1 795 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 UNC13AQ9UPW8 1703 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 LOC100506127A0A0U1RQW1 187 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 F9P00740 461 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 FAM153BP0C7A2 387 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 ZSCAN5DPP0CG00 497 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 MARSP56192 900 aaKnown RBP13.98□□□□□ -0.17
COL4A1-201ENST00000375820 CYP4F2P78329 520 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 CYP4F3Q08477 520 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 MGAT5Q09328 741 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 EIF2B5Q13144 721 aaKnown RBP13.98□□□□□ -0.17
COL4A1-201ENST00000375820 FAM153CQ494X1 144 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 METTL6Q8TCB7 284 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 MROH8Q9H579 483 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 BDNFP23560 247 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 RPL21P46778 160 aaKnown RBP13.98□□□□□ -0.17
COL4A1-201ENST00000375820 IFI35P80217 286 aaPredicted RBP13.98□□□□□ -0.17
COL4A1-201ENST00000375820 PCDH20Q8N6Y1 951 aaKnown RBP13.98□□□□□ -0.17
COL4A1-201ENST00000375820 CERKQ8TCT0 537 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 EMID1Q96A84 441 aaPredicted RBP13.98□□□□□ -0.17
COL4A1-201ENST00000375820 ZBTB45Q96K62 511 aaPredicted RBP13.98□□□□□ -0.17
COL4A1-201ENST00000375820 RIPK2O43353 540 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 DCXO43602 365 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 BCL10O95999 233 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 NTRK1P04629 796 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 FAM58BPP0C7Q3 252 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 INSRRP14616 1297 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 PTSQ03393 145 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 TGM3Q08188 693 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 CLYBLQ8N0X4 340 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 C19orf60Q96EN9 201 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 CDHR5Q9HBB8 845 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 ARHGAP20Q9P2F6 1191 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 CROTQ9UKG9 612 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 TMEM114B3SHH9 223 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 RAD51BO15315 384 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 MPOP05164 745 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 TSPAN19P0C672 248 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 HK2P52789 917 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 BACE1P56817 501 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 LPIN1Q14693 890 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 MFSD7Q6UXD7 560 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 ZNF720Q7Z2F6 126 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 ZBTB46Q86UZ6 589 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 TRAPPC5Q8IUR0 188 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 FAM126BQ8IXS8 530 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 LRRN4CLQ8ND94 238 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 OR6Y1Q8NGX8 325 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 FUT8Q9BYC5 575 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 STK39Q9UEW8 545 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 DDX20Q9UHI6 824 aaKnown RBP13.98□□□□□ -0.17
COL4A1-201ENST00000375820 FBXL21Q9UKT6 434 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 COQ6Q9Y2Z9 468 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 ADGRA3Q8IWK6 1321 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 A0A0A6YYK5 440 aaPredicted RBP13.98□□□□□ -0.17
COL4A1-201ENST00000375820 DDTLA6NHG4 134 aaPredicted RBP13.98□□□□□ -0.17
COL4A1-201ENST00000375820 CRATP43155 626 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 C9orf131Q5VYM1 1079 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 SV2AQ7L0J3 742 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 SNX32Q86XE0 403 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 SLC41A1Q8IVJ1 513 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 FAM20CQ8IXL6 584 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 SLC2A14Q8TDB8 520 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 PYDC1Q8WXC3 89 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 HGH1Q9BTY7 390 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 DMGDHQ9UI17 866 aaKnown RBP13.98□□□□□ -0.17
COL4A1-201ENST00000375820 PLAGL2Q9UPG8 496 aa13.98□□□□□ -0.17
COL4A1-201ENST00000375820 SLC22A9Q8IVM8 553 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 DCLK3Q9C098 648 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 MYL12BO14950 172 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 PIAS1O75925 651 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 POLD2P49005 469 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 GPR15P49685 360 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 PRKAA1Q13131 559 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 NYAP1Q6ZVC0 841 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 NETO2Q8NC67 525 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 FRMD8Q9BZ67 464 aaPredicted RBP13.97□□□□□ -0.17
COL4A1-201ENST00000375820 GRIP2Q9C0E4 1043 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 VTI1BQ9UEU0 232 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 A0A096LPK6 155 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 TISP43B9A030 160 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 SERPINF2P08697 491 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 PTPN4P29074 926 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 FOXR1Q6PIV2 292 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 CDRT15Q96T59 188 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 IGFBP4P22692 258 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 PIK3R1P27986 724 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 LSM3P62310 102 aaKnown RBP13.97□□□□□ -0.17
COL4A1-201ENST00000375820 FAAP100Q0VG06 881 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 XRCC4Q13426 336 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms