RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 LAMA1P25391 3075 aa11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 ASCC3Q8N3C0 2202 aaKnown RBP11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 C2orf78A6NCI8 922 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 SOBPA7XYQ1 873 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 HHLA1C9JL84 531 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 ZNF185O15231 689 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 TOP3BO95985 862 aaKnown RBP11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 USP17L7P0C7H9 530 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 PDGFRAP16234 1089 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 DESP17661 470 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 GPD1P21695 349 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 PSMA2P25787 234 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CTNNA1P35221 906 aaKnown RBP11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 MAGEA11P43364 429 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 PEX5P50542 639 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 DNA2P51530 1060 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 TKTL1P51854 596 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 ZNF143P52747 638 aaPredicted RBP11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CACNA2D1P54289 1103 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 RPL10AP62906 217 aaKnown RBP11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 OGDHQ02218 1023 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CKAP4Q07065 602 aaKnown RBP11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CFAP221Q4G0U5 840 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 RAB41Q5JT25 222 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 SH3PXD2AQ5TCZ1 1133 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 VSTM1Q6UX27 236 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 ARCQ7LC44 396 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CYP2U1Q7Z449 544 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CREG2Q8IUH2 290 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 SCN4BQ8IWT1 228 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 RHOT1Q8IXI2 618 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 NIPA2Q8N8Q9 360 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 MNS1Q8NEH6 495 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 ZMIZ2Q8NF64 920 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 SH3RF2Q8TEC5 729 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 COG1Q8WTW3 980 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 RXFP2Q8WXD0 754 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 EXOC4Q96A65 974 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 TRMT2BQ96GJ1 504 aaKnown RBP11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CAPZA3Q96KX2 299 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 PSMB7Q99436 277 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CARD6Q9BX69 1037 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 PNPLA8Q9NP80 782 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CNGB3Q9NQW8 809 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 UXTQ9UBK9 157 aaPredicted RBP11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 EBF1Q9UH73 591 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 ZMIZ1Q9ULJ6 1067 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 AKAP13Q12802 2813 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CACNA1EQ15878 2313 aa11.36□□□□□ -0.59
HLA-DQA1-202ENST00000374949 C2CD4BA6NLJ0 364 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 F8VP50 259 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 TRIM66O15016 1216 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 SART1O43290 800 aaKnown RBP11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CEP104O60308 925 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 RNF8O76064 485 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 GLI1P08151 1106 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 OPRD1P41143 372 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 SSR1P43307 286 aaKnown RBP11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 TERF1P54274 439 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 RWDD2BP57060 319 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 YWHAZP63104 245 aaKnown RBP11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 ADIGQ0VDE8 80 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 TAF5Q15542 800 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 C2orf27AQ580R0 203 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CCDC181Q5TID7 509 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 DAB2IPQ5VWQ8 1189 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 SLC26A9Q7LBE3 791 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CPNE8Q86YQ8 564 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CCDC33Q8N5R6 958 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 EMC1Q8N766 993 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 MDGA1Q8NFP4 955 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 MYRIPQ8NFW9 859 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 USP33Q8TEY7 942 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CLEC4CQ8WTT0 213 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 IRGQQ8WZA9 623 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 C8orf48Q96LL4 319 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 MYRFLQ96LU7 910 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 NCAPGQ9BPX3 1015 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CNPY3Q9BT09 278 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 TMEM121BQ9BXQ6 578 aaPredicted RBP11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 ADAM33Q9BZ11 813 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CARD9Q9H257 536 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 LINC00597Q9H2U6 94 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 TMEM9BQ9NQ34 198 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 TMEM30AQ9NV96 361 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 MYH10P35580 1976 aa11.35□□□□□ -0.59
HLA-DQA1-202ENST00000374949 ASPMQ8IZT6 3477 aa11.34□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CTAGE15A4D2H0 777 aa11.34□□□□□ -0.59
HLA-DQA1-202ENST00000374949 SCAMP3O14828 347 aaKnown RBP11.34□□□□□ -0.59
HLA-DQA1-202ENST00000374949 KHNYNO15037 678 aaKnown RBP11.34□□□□□ -0.59
HLA-DQA1-202ENST00000374949 PSTPIP1O43586 416 aa11.34□□□□□ -0.59
HLA-DQA1-202ENST00000374949 HSF2BPO75031 334 aa11.34□□□□□ -0.59
HLA-DQA1-202ENST00000374949 GRAP2O75791 330 aa11.34□□□□□ -0.59
HLA-DQA1-202ENST00000374949 ZBED1O96006 694 aa11.34□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CTAGE8P0CG41 777 aa11.34□□□□□ -0.59
HLA-DQA1-202ENST00000374949 HNRNPLP14866 589 aaKnown RBP eCLIP11.34□□□□□ -0.59
HLA-DQA1-202ENST00000374949 SDC4P31431 198 aa11.34□□□□□ -0.59
HLA-DQA1-202ENST00000374949 DHPSP49366 369 aaPredicted RBP11.34□□□□□ -0.59
HLA-DQA1-202ENST00000374949 DAOAP59103 153 aa11.34□□□□□ -0.59
HLA-DQA1-202ENST00000374949 TAS2R40P59535 323 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms