RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 CCDC153Q494R4 210 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 C10orf120Q5SQS8 335 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 ADGRF2Q8IZF7 708 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 FUKQ8N0W3 1084 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 MYO1HQ8N1T3 1032 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 TCP10LQ8TDR4 215 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 VTI1BQ9UEU0 232 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 C4AP0C0L4 1744 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 C4BP0C0L5 1744 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 UBR2Q8IWV8 1755 aa12.55□□□□□ -0.4
NPLOC4-202ENST00000374747 LYPLA2O95372 231 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 BCAT1P54687 386 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 PTPN11Q06124 597 aaPredicted RBP12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 SHROOM1Q2M3G4 852 aaPredicted RBP12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 CHADLQ6NUI6 762 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 SLFN11Q7Z7L1 901 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 PGM2Q96G03 612 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 NSMCE2Q96MF7 247 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 SPRTNQ9H040 489 aaPredicted RBP12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 MYLK2Q9H1R3 596 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 FANCEQ9HB96 536 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 CYLDQ9NQC7 956 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 XPNPEP3Q9NQH7 507 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 RGS18Q9NS28 235 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 ATAD3AQ9NVI7 634 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 CROTQ9UKG9 612 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 TK2O00142 265 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 TRIM13O60858 407 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 F9P00740 461 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 SPATA31C1P0DKV0 1188 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 EPB42P16452 691 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 LHX1P48742 406 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 CSHL1Q14406 222 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 PGS1Q32NB8 556 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 FBXO47Q5MNV8 452 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 N4BP2L1Q5TBK1 243 aaPredicted RBP12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 RIPOR1Q6ZS17 1223 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 C11orf96Q7Z7L8 435 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 SLC47A2Q86VL8 602 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 LRRC15Q8TF66 581 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 SLITRK1Q96PX8 696 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 SMAD5Q99717 465 aaKnown RBP12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 DCLK3Q9C098 648 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 PARVBQ9HBI1 364 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 ADARP55265 1226 aaKnown RBP12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 XRCC4Q13426 336 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 DDR2Q16832 855 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 USP39Q53GS9 565 aaKnown RBP12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 YAF2Q8IY57 180 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 ABRAQ8N0Z2 381 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 POLG2Q9UHN1 485 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 SH3BP1Q9Y3L3 701 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 TOGARAM1Q9Y4F4 1720 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 FAM25AB3EWG3 89 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 FAM25CB3EWG5 89 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 FAM25GB3EWG6 89 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 ALDH7A1P49419 539 aaKnown RBP12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 TRIQKQ629K1 86 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 TMEM26Q6ZUK4 368 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 MOB2Q70IA6 237 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 SLC20A1Q8WUM9 679 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 YIPF2Q9BWQ6 316 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 GDF3Q9NR23 364 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 GPATCH2LQ9NWQ4 482 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 RABGEF1Q9UJ41 708 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 PNMA8CA0A1B0GUJ8 204 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 ZSCAN5CA6NGD5 496 aaPredicted RBP12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 MEI4A8MW99 385 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 H7C4K7 107 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 PRRG1O14668 218 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 AP1G2O75843 785 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 LDLRP01130 860 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 TPBGLP0DKB5 382 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 PRKAA2P54646 552 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 NEDD8Q15843 81 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 SPDYCQ5MJ68 293 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 ACTL9Q8TC94 416 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 TATDN2Q93075 761 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 RNFT2Q96EX2 444 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 C6orf62Q9GZU0 229 aaPredicted RBP12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 RAD21L1Q9H4I0 556 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 SNTG2Q9NY99 539 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 AP4E1Q9UPM8 1137 aa12.54□□□□□ -0.4
NPLOC4-202ENST00000374747 PIPSLA2A3N6 862 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 CENPXA8MT69 81 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 CSDE1O75534 798 aaKnown RBP12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 RPL21P46778 160 aaKnown RBP12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 RTP1P59025 263 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 ELF3P78545 371 aaPredicted RBP12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 DGUOKQ16854 277 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 RGMBQ6NW40 437 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 SLC44A2Q8IWA5 706 aaPredicted RBP12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 NLGN2Q8NFZ4 835 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 RORBQ92753 470 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 INPP4AQ96PE3 977 aaPredicted RBP12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 SEPHS2Q99611 448 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 SPATA2Q9UM82 520 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 LRP6O75581 1613 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 ANKRD63C9JTQ0 380 aa12.53□□□□□ -0.4
NPLOC4-202ENST00000374747 MAFO75444 373 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms