RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 GSTCDQ8NEC7 633 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 ACTRT2Q8TDY3 377 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 RNF139Q8WU17 664 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 ARNTL2Q8WYA1 636 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 TUT1Q9H6E5 874 aaKnown RBP11.7□□□□□ -0.54
PTPN20-204ENST00000374346 SYBUQ9NX95 663 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 IL1RAPL1Q9NZN1 696 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 IGSF9Q9P2J2 1179 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 MID2Q9UJV3 735 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 UBQLN1Q9UMX0 589 aaKnown RBP11.7□□□□□ -0.54
PTPN20-204ENST00000374346 F5H423 210 aaPredicted RBP11.7□□□□□ -0.54
PTPN20-204ENST00000374346 UPP2O95045 317 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 HSPA4LO95757 839 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 MPOP05164 745 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 PDGFRBP09619 1106 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 ZNF286BP0CG31 522 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 ACAT1P24752 427 aaKnown RBP11.7□□□□□ -0.54
PTPN20-204ENST00000374346 PSMB4P28070 264 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 ADORA2AP29274 412 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 PRDX6P30041 224 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 RNF220Q5VTB9 566 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 METTL21CQ5VZV1 264 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 NOTUMQ6P988 496 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 POTEAQ6S8J7 498 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 PID1Q7Z2X4 250 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 ANKRD13AQ8IZ07 590 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 APPL2Q8NEU8 664 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 SLC26A7Q8TE54 656 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 EMID1Q96A84 441 aaPredicted RBP11.7□□□□□ -0.54
PTPN20-204ENST00000374346 ZNF778Q96MU6 729 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 R3HDMLQ9H3Y0 253 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 DPEP3Q9H4B8 488 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 VTA1Q9NP79 307 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 BFARQ9NZS9 450 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 TUBGCP4Q9UGJ1 667 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 ARHGAP26Q9UNA1 814 aa11.7□□□□□ -0.54
PTPN20-204ENST00000374346 SRCAPQ6ZRS2 3230 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 TMEM114B3SHH9 223 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 NCAM2O15394 837 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 GNAT1P11488 350 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 EPHB1P54762 984 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 SATB1Q01826 763 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 CDC16Q13042 620 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 ITGA9Q13797 1035 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 ZBTB6Q15916 424 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 DCAF6Q58WW2 860 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 CATSPER4Q7RTX7 472 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 KBTBD2Q8IY47 623 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 DEFB106AQ8N104 65 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 PYROXD2Q8N2H3 581 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 SLC25A41Q8N5S1 370 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.69□□□□□ -0.54
PTPN20-204ENST00000374346 SHCBP1Q8NEM2 672 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 ZMAT2Q96NC0 199 aaKnown RBP11.69□□□□□ -0.54
PTPN20-204ENST00000374346 KCNK16Q96T55 309 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 SORT1Q99523 831 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 SNX15Q9NRS6 342 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 PNPOQ9NVS9 261 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 TMEM216Q9P0N5 145 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 KLHL8Q9P2G9 620 aaPredicted RBP11.69□□□□□ -0.54
PTPN20-204ENST00000374346 CDH22Q9UJ99 828 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 PPM1HQ9ULR3 514 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 PCDHB12Q9Y5F1 795 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 RAD54BQ9Y620 910 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 SCN4AP35499 1836 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 ERI2A8K979 691 aaKnown RBP11.69□□□□□ -0.54
PTPN20-204ENST00000374346 PPEF2O14830 753 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 XPO1O14980 1071 aaKnown RBP11.69□□□□□ -0.54
PTPN20-204ENST00000374346 CREB3O43889 395 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 DAB1O75553 588 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 LYNP07948 512 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 ERVK-10P10266 1014 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 NOS2P35228 1153 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 AIF1P55008 147 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 ROR2Q01974 943 aaKnown RBP11.69□□□□□ -0.54
PTPN20-204ENST00000374346 GRIK4Q16099 956 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 GALNT15Q8N3T1 639 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 POU5F2Q8N7G0 328 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 OR6Y1Q8NGX8 325 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 SLC2A14Q8TDB8 520 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 TSNARE1Q96NA8 513 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 RBBP8Q99708 897 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 KLHL4Q9C0H6 718 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 SLC17A6Q9P2U8 582 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 GINS2Q9Y248 185 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 PSAT1Q9Y617 370 aa11.69□□□□□ -0.54
PTPN20-204ENST00000374346 MAGEB16A2A368 324 aa11.68□□□□□ -0.54
PTPN20-204ENST00000374346 EEF2KO00418 725 aaKnown RBP11.68□□□□□ -0.54
PTPN20-204ENST00000374346 MTSS1O43312 755 aa11.68□□□□□ -0.54
PTPN20-204ENST00000374346 TIMM44O43615 452 aa11.68□□□□□ -0.54
PTPN20-204ENST00000374346 APOA4P06727 396 aa11.68□□□□□ -0.54
PTPN20-204ENST00000374346 UBTFL6P0CB48 400 aaPredicted RBP11.68□□□□□ -0.54
PTPN20-204ENST00000374346 SERPINB6P35237 376 aa11.68□□□□□ -0.54
PTPN20-204ENST00000374346 MLH1P40692 756 aa11.68□□□□□ -0.54
PTPN20-204ENST00000374346 MED21Q13503 144 aa11.68□□□□□ -0.54
PTPN20-204ENST00000374346 FRG1Q14331 258 aaKnown RBP11.68□□□□□ -0.54
PTPN20-204ENST00000374346 PAFAH1B3Q15102 231 aaKnown RBP11.68□□□□□ -0.54
PTPN20-204ENST00000374346 STRA8Q7Z7C7 330 aa11.68□□□□□ -0.54
PTPN20-204ENST00000374346 RSPH3Q86UC2 560 aa11.68□□□□□ -0.54
PTPN20-204ENST00000374346 MFN1Q8IWA4 741 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms