RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 USP17L7P0C7H9 530 aa14.63□□□□□ -0.07
TRAF1-201ENST00000373887 TCHHL1Q5QJ38 904 aaPredicted RBP14.63□□□□□ -0.07
TRAF1-201ENST00000373887 IQSEC1Q6DN90 963 aa14.63□□□□□ -0.07
TRAF1-201ENST00000373887 ZNF544Q6NX49 715 aa14.63□□□□□ -0.07
TRAF1-201ENST00000373887 OTOP1Q7RTM1 612 aa14.63□□□□□ -0.07
TRAF1-201ENST00000373887 PTAR1Q7Z6K3 402 aaPredicted RBP14.63□□□□□ -0.07
TRAF1-201ENST00000373887 SCUBE3Q8IX30 993 aa14.63□□□□□ -0.07
TRAF1-201ENST00000373887 ZSWIM2Q8NEG5 633 aa14.63□□□□□ -0.07
TRAF1-201ENST00000373887 FOXP3Q9BZS1 431 aa14.63□□□□□ -0.07
TRAF1-201ENST00000373887 CLPBQ9H078 707 aa14.63□□□□□ -0.07
TRAF1-201ENST00000373887 JCHAINP01591 159 aa14.63□□□□□ -0.07
TRAF1-201ENST00000373887 KCTD21Q4G0X4 260 aa14.63□□□□□ -0.07
TRAF1-201ENST00000373887 AGKQ53H12 422 aa14.63□□□□□ -0.07
TRAF1-201ENST00000373887 BOLA3Q53S33 107 aa14.63□□□□□ -0.07
TRAF1-201ENST00000373887 MTSS1LQ765P7 747 aa14.63□□□□□ -0.07
TRAF1-201ENST00000373887 EPS8L2Q9H6S3 715 aa14.63□□□□□ -0.07
TRAF1-201ENST00000373887 SH3BP4Q9P0V3 963 aa14.63□□□□□ -0.07
TRAF1-201ENST00000373887 SPATA31D1Q6ZQQ2 1576 aa14.63□□□□□ -0.07
TRAF1-201ENST00000373887 A0A087X0T9 212 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 MTSS1O43312 755 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 MICAL2O94851 1124 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 NUDT14O95848 222 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 CALCAP01258 141 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 GJB1P08034 283 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 LBPP18428 481 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 RRM1P23921 792 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 PIK3R1P27986 724 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 TPP2P29144 1249 aaPredicted RBP14.62□□□□□ -0.07
TRAF1-201ENST00000373887 CASP7P55210 303 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 TBX4P57082 545 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 HELQQ8TDG4 1101 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 FAR2Q96K12 515 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 TAGLN3Q9UI15 199 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 ENO2P09104 434 aaPredicted RBP14.62□□□□□ -0.07
TRAF1-201ENST00000373887 IL12RB1P42701 662 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 SCTRP47872 440 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 RARRES1P49788 294 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 RALGDSQ12967 914 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 RASA2Q15283 850 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 TAF2Q6P1X5 1199 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 TMEM199Q8N511 208 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 ENKURQ8TC29 256 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 SLC2A14Q8TDB8 520 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 COMMD8Q9NX08 183 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 SLC9A8Q9Y2E8 581 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.62□□□□□ -0.07
TRAF1-201ENST00000373887 SPATA31D3P0C874 917 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 NDUFA5Q16718 116 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 SPATA31D4Q6ZUB0 917 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 SV2AQ7L0J3 742 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 CAMKK1Q8N5S9 505 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 TPCN2Q8NHX9 752 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 VCLP18206 1134 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 C4orf22Q6V702 233 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 ARHGEF19Q8IW93 802 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 LGI2Q8N0V4 545 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 VWDEQ8N2E2 1590 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 FAM228BP0C875 321 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 OR1E1P30953 314 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 CELF3Q5SZQ8 465 aaKnown RBP14.62□□□□□ -0.07
TRAF1-201ENST00000373887 ARMC3Q5W041 872 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 SLC13A5Q86YT5 568 aaPredicted RBP14.62□□□□□ -0.07
TRAF1-201ENST00000373887 CDK20Q8IZL9 346 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.62□□□□□ -0.07
TRAF1-201ENST00000373887 MOSPD2Q8NHP6 518 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 PRRG3Q9BZD7 231 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 CERS4Q9HA82 394 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 DDX18Q9NVP1 670 aaKnown RBP14.62□□□□□ -0.07
TRAF1-201ENST00000373887 GALNT8Q9NY28 637 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 DUSP10Q9Y6W6 482 aa14.62□□□□□ -0.07
TRAF1-201ENST00000373887 IQCMA0A1B0GVH7 501 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 A0A1W2PQJ5 194 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 RECQL4O94761 1208 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 IFNA14P01570 189 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 MAPKAPK2P49137 400 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 SERPINH1P50454 418 aaKnown RBP14.61□□□□□ -0.07
TRAF1-201ENST00000373887 EVX2Q03828 476 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 FGD3Q5JSP0 725 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 CASP12Q6UXS9 341 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 UBE2OQ9C0C9 1292 aaKnown RBP14.61□□□□□ -0.07
TRAF1-201ENST00000373887 RIBC2Q9H4K1 309 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 STK39Q9UEW8 545 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 BCL10O95999 233 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 BMPR2Q13873 1038 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 TMEM121Q9BTD3 319 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 TDRKHQ9Y2W6 561 aaKnown RBP14.61□□□□□ -0.07
TRAF1-201ENST00000373887 AAR2Q9Y312 384 aaKnown RBP14.61□□□□□ -0.07
TRAF1-201ENST00000373887 TMEM131LA2VDJ0 1609 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 NT5C1B-RDH14C9J2C7 533 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 SMAPO00193 183 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 HS6ST1O60243 411 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 CNPP09543 421 aaKnown RBP14.61□□□□□ -0.07
TRAF1-201ENST00000373887 CORO7P57737 925 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 NR6A1Q15406 480 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 DENND6AQ8IWF6 608 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 ELOVL6Q9H5J4 265 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 UMPSP11172 480 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 TPH1P17752 444 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 OAZ1P54368 228 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 ELAVL2Q12926 359 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms