RNA–Protein interactions for RNA: ENST00000373556.7

HDAC8-202, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-202ENST00000373556 TTC31Q49AM3 519 aaPredicted RBP16.73■□□□□ 0.27
HDAC8-202ENST00000373556 FSCBQ5H9T9 825 aa16.73■□□□□ 0.27
HDAC8-202ENST00000373556 ZNF776Q68DI1 518 aaPredicted RBP16.73■□□□□ 0.27
HDAC8-202ENST00000373556 IL27RAQ6UWB1 636 aa16.73■□□□□ 0.27
HDAC8-202ENST00000373556 DHX40Q8IX18 779 aaKnown RBP16.73■□□□□ 0.27
HDAC8-202ENST00000373556 TTC17Q96AE7 1141 aa16.73■□□□□ 0.27
HDAC8-202ENST00000373556 SLC39A13Q96H72 371 aa16.73■□□□□ 0.27
HDAC8-202ENST00000373556 DDX50Q9BQ39 737 aaKnown RBP16.73■□□□□ 0.27
HDAC8-202ENST00000373556 SRRTQ9BXP5 876 aaKnown RBP16.73■□□□□ 0.27
HDAC8-202ENST00000373556 TM9SF3Q9HD45 589 aa16.73■□□□□ 0.27
HDAC8-202ENST00000373556 UBE2TQ9NPD8 197 aaPredicted RBP16.73■□□□□ 0.27
HDAC8-202ENST00000373556 ACP6Q9NPH0 428 aa16.73■□□□□ 0.27
HDAC8-202ENST00000373556 CYTH4Q9UIA0 394 aa16.73■□□□□ 0.27
HDAC8-202ENST00000373556 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.73■□□□□ 0.27
HDAC8-202ENST00000373556 SNX11Q9Y5W9 270 aa16.73■□□□□ 0.27
HDAC8-202ENST00000373556 PLXNA2O75051 1894 aa16.73■□□□□ 0.27
HDAC8-202ENST00000373556 DSPP15924 2871 aaKnown RBP16.73■□□□□ 0.27
HDAC8-202ENST00000373556 NYNRINQ9P2P1 1898 aaKnown RBP16.73■□□□□ 0.27
HDAC8-202ENST00000373556 TP53BP1Q12888 1972 aaPredicted RBP16.73■□□□□ 0.27
HDAC8-202ENST00000373556 KCNK3O14649 394 aa16.72■□□□□ 0.27
HDAC8-202ENST00000373556 CAPN9O14815 690 aa16.72■□□□□ 0.27
HDAC8-202ENST00000373556 SIN3BO75182 1162 aa16.72■□□□□ 0.27
HDAC8-202ENST00000373556 LETM1O95202 739 aaPredicted RBP16.72■□□□□ 0.27
HDAC8-202ENST00000373556 ZNF883P0CG24 379 aa16.72■□□□□ 0.27
HDAC8-202ENST00000373556 NUMBP49757 651 aa16.72■□□□□ 0.27
HDAC8-202ENST00000373556 ST8SIA6P61647 398 aa16.72■□□□□ 0.27
HDAC8-202ENST00000373556 PAK1Q13153 545 aa16.72■□□□□ 0.27
HDAC8-202ENST00000373556 CDH18Q13634 790 aa16.72■□□□□ 0.27
HDAC8-202ENST00000373556 DCAF6Q58WW2 860 aa16.72■□□□□ 0.27
HDAC8-202ENST00000373556 MS4A13Q5J8X5 152 aa16.72■□□□□ 0.27
HDAC8-202ENST00000373556 FOXR2Q6PJQ5 311 aa16.72■□□□□ 0.27
HDAC8-202ENST00000373556 SLCO6A1Q86UG4 719 aa16.72■□□□□ 0.27
HDAC8-202ENST00000373556 ZNF557Q8N988 423 aaPredicted RBP16.72■□□□□ 0.27
HDAC8-202ENST00000373556 GANCQ8TET4 914 aa16.72■□□□□ 0.27
HDAC8-202ENST00000373556 ADAMTS14Q8WXS8 1223 aa16.72■□□□□ 0.27
HDAC8-202ENST00000373556 MRGPRX3Q96LB0 322 aa16.72■□□□□ 0.27
HDAC8-202ENST00000373556 RSPH9Q9H1X1 276 aaPredicted RBP16.72■□□□□ 0.27
HDAC8-202ENST00000373556 CNTN6Q9UQ52 1028 aa16.72■□□□□ 0.27
HDAC8-202ENST00000373556 PLXNB3Q9ULL4 1909 aa16.72■□□□□ 0.27
HDAC8-202ENST00000373556 ANKRD11Q6UB99 2663 aaPredicted RBP16.72■□□□□ 0.27
HDAC8-202ENST00000373556 PTPRBP23467 1997 aa16.71■□□□□ 0.27
HDAC8-202ENST00000373556 FREM2Q5SZK8 3169 aa16.71■□□□□ 0.27
HDAC8-202ENST00000373556 FAM47DPA6NHR8 397 aa16.71■□□□□ 0.27
HDAC8-202ENST00000373556 TTC34A8MYJ7 566 aa16.71■□□□□ 0.27
HDAC8-202ENST00000373556 E5RJQ4 531 aa16.71■□□□□ 0.27
HDAC8-202ENST00000373556 PAPSS1O43252 624 aaPredicted RBP16.71■□□□□ 0.27
HDAC8-202ENST00000373556 SART1O43290 800 aaKnown RBP16.71■□□□□ 0.27
HDAC8-202ENST00000373556 THAP12O43422 761 aa16.71■□□□□ 0.27
HDAC8-202ENST00000373556 GNA14O95837 355 aa16.71■□□□□ 0.27
HDAC8-202ENST00000373556 ACADSBP45954 432 aa16.71■□□□□ 0.27
HDAC8-202ENST00000373556 MARSP56192 900 aaKnown RBP16.71■□□□□ 0.27
HDAC8-202ENST00000373556 PITX1P78337 314 aaPredicted RBP16.71■□□□□ 0.27
HDAC8-202ENST00000373556 NNTQ13423 1086 aa16.71■□□□□ 0.27
HDAC8-202ENST00000373556 HNRNPA1L2Q32P51 320 aaKnown RBP16.71■□□□□ 0.27
HDAC8-202ENST00000373556 ZC3H12AQ5D1E8 599 aaKnown RBP16.71■□□□□ 0.27
HDAC8-202ENST00000373556 PITRM1Q5JRX3 1037 aa16.71■□□□□ 0.27
HDAC8-202ENST00000373556 RAP1GAP2Q684P5 730 aa16.71■□□□□ 0.27
HDAC8-202ENST00000373556 GJB7Q6PEY0 223 aa16.71■□□□□ 0.27
HDAC8-202ENST00000373556 CCDC117Q8IWD4 279 aaPredicted RBP16.71■□□□□ 0.27
HDAC8-202ENST00000373556 LGI2Q8N0V4 545 aa16.71■□□□□ 0.27
HDAC8-202ENST00000373556 CRACR2AQ9BSW2 395 aa16.71■□□□□ 0.27
HDAC8-202ENST00000373556 SLC4A5Q9BY07 1137 aa16.71■□□□□ 0.27
HDAC8-202ENST00000373556 PABPC3Q9H361 631 aaKnown RBP16.71■□□□□ 0.27
HDAC8-202ENST00000373556 SGK2Q9HBY8 427 aa16.71■□□□□ 0.27
HDAC8-202ENST00000373556 TJP2Q9UDY2 1190 aa16.71■□□□□ 0.27
HDAC8-202ENST00000373556 SERGEFQ9UGK8 458 aa16.71■□□□□ 0.27
HDAC8-202ENST00000373556 ERVW-1Q9UQF0 538 aa16.71■□□□□ 0.27
HDAC8-202ENST00000373556 APOBEC2Q9Y235 224 aaKnown RBP16.71■□□□□ 0.27
HDAC8-202ENST00000373556 BTBD3Q9Y2F9 522 aa16.71■□□□□ 0.27
HDAC8-202ENST00000373556 ANKRD6Q9Y2G4 727 aa16.71■□□□□ 0.27
HDAC8-202ENST00000373556 CABIN1Q9Y6J0 2220 aa16.71■□□□□ 0.27
HDAC8-202ENST00000373556 LUC7L3O95232 432 aaKnown RBP16.7■□□□□ 0.26
HDAC8-202ENST00000373556 APOEP02649 317 aa16.7■□□□□ 0.26
HDAC8-202ENST00000373556 ASLP04424 464 aa16.7■□□□□ 0.26
HDAC8-202ENST00000373556 IGHV4-34P06331 123 aa16.7■□□□□ 0.26
HDAC8-202ENST00000373556 TACR2P21452 398 aa16.7■□□□□ 0.26
HDAC8-202ENST00000373556 CD27P26842 260 aa16.7■□□□□ 0.26
HDAC8-202ENST00000373556 GNA15P30679 374 aa16.7■□□□□ 0.26
HDAC8-202ENST00000373556 APBA1Q02410 837 aa16.7■□□□□ 0.26
HDAC8-202ENST00000373556 TAF5Q15542 800 aa16.7■□□□□ 0.26
HDAC8-202ENST00000373556 TEAD4Q15561 434 aa16.7■□□□□ 0.26
HDAC8-202ENST00000373556 KCNT1Q5JUK3 1230 aa16.7■□□□□ 0.26
HDAC8-202ENST00000373556 GLRX5Q86SX6 157 aa16.7■□□□□ 0.26
HDAC8-202ENST00000373556 CHSY1Q86X52 802 aa16.7■□□□□ 0.26
HDAC8-202ENST00000373556 APCDD1Q8J025 514 aa16.7■□□□□ 0.26
HDAC8-202ENST00000373556 BAHD1Q8TBE0 780 aaPredicted RBP16.7■□□□□ 0.26
HDAC8-202ENST00000373556 RHBDD1Q8TEB9 315 aa16.7■□□□□ 0.26
HDAC8-202ENST00000373556 ZNF606Q8WXB4 792 aa16.7■□□□□ 0.26
HDAC8-202ENST00000373556 POPDC2Q9HBU9 364 aa16.7■□□□□ 0.26
HDAC8-202ENST00000373556 OSGEPQ9NPF4 335 aa16.7■□□□□ 0.26
HDAC8-202ENST00000373556 FBXL12Q9NXK8 326 aa16.7■□□□□ 0.26
HDAC8-202ENST00000373556 NCKAP1Q9Y2A7 1128 aa16.7■□□□□ 0.26
HDAC8-202ENST00000373556 CEP83Q9Y592 693 aa16.7■□□□□ 0.26
HDAC8-202ENST00000373556 A0A1W2PP55 124 aa16.69■□□□□ 0.26
HDAC8-202ENST00000373556 GOLGA8CPA6NN73 597 aa16.69■□□□□ 0.26
HDAC8-202ENST00000373556 TAF4O00268 1085 aa16.69■□□□□ 0.26
HDAC8-202ENST00000373556 MID1O15344 667 aa16.69■□□□□ 0.26
HDAC8-202ENST00000373556 FLRT2O43155 660 aa16.69■□□□□ 0.26
HDAC8-202ENST00000373556 MED7O43513 233 aa16.69■□□□□ 0.26
HDAC8-202ENST00000373556 RNASEH1O60930 286 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms