RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 SNRNP27Q8WVK2 155 aaKnown RBP6.59□□□□□ -1.35
CHD6-202ENST00000373222 ACAP3Q96P50 834 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 LGMNQ99538 433 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 NT5C1AQ9BXI3 368 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 DHX35Q9H5Z1 703 aaKnown RBP6.59□□□□□ -1.35
CHD6-202ENST00000373222 MANSC1Q9H8J5 431 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 RSAD1Q9HA92 442 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 POPDC2Q9HBU9 364 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 ASNSD1Q9NWL6 643 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 MAGED2Q9UNF1 606 aaPredicted RBP6.59□□□□□ -1.35
CHD6-202ENST00000373222 MAD1L1Q9Y6D9 718 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 USH1CQ9Y6N9 552 aa6.59□□□□□ -1.35
CHD6-202ENST00000373222 A0A1B0GUA9 196 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 CFAP73A6NFT4 308 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 MEIS3P2A8K0S8 358 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 CLDN5O00501 218 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 BEST1O76090 585 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 SNAI1O95863 264 aaPredicted RBP6.58□□□□□ -1.36
CHD6-202ENST00000373222 MT-ND3P03897 115 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 MCF2P10911 925 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 GOT1P17174 413 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 AMPD1P23109 780 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 TKTP29401 623 aaKnown RBP6.58□□□□□ -1.36
CHD6-202ENST00000373222 IREB2P48200 963 aaKnown RBP6.58□□□□□ -1.36
CHD6-202ENST00000373222 DGKGP49619 791 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 BCAR1P56945 870 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 SOX4Q06945 474 aaPredicted RBP6.58□□□□□ -1.36
CHD6-202ENST00000373222 INCA1Q0VD86 236 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 BSPRYQ5W0U4 402 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 TLDC1Q6P9B6 456 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 LCLAT1Q6UWP7 414 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 DSTYKQ6XUX3 929 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 CCDC91Q7Z6B0 441 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 LONP2Q86WA8 852 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 FAM131BQ86XD5 332 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.58□□□□□ -1.36
CHD6-202ENST00000373222 OR6B3Q8NGW1 331 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 SLC44A1Q8WWI5 657 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 NCAPGQ9BPX3 1015 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 SEZ6LQ9BYH1 1024 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 TRIM8Q9BZR9 551 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 FOXP3Q9BZS1 431 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 ACSS2Q9NR19 701 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 MTMR10Q9NXD2 777 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 HEY2Q9UBP5 337 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 ZC3H7BQ9UGR2 993 aaKnown RBP6.58□□□□□ -1.36
CHD6-202ENST00000373222 GTF2IRD1Q9UHL9 959 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 PPT2Q9UMR5 302 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 SMG5Q9UPR3 1016 aaKnown RBP6.58□□□□□ -1.36
CHD6-202ENST00000373222 HCN4Q9Y3Q4 1203 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 SLC15A5A6NIM6 579 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 GAS2O43903 313 aaKnown RBP6.58□□□□□ -1.36
CHD6-202ENST00000373222 GDF9O60383 454 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 SNX2O60749 519 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 AGR2O95994 175 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 ZBED1O96006 694 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 INHBAP08476 426 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 VAV1P15498 845 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 SMPD1P17405 629 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 ACAT1P24752 427 aaKnown RBP6.58□□□□□ -1.36
CHD6-202ENST00000373222 CYP2F1P24903 491 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 PHBP35232 272 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 PCK1P35558 622 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 ABCG1P45844 678 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 NDUFV1P49821 464 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 AFF1P51825 1210 aaKnown RBP6.58□□□□□ -1.36
CHD6-202ENST00000373222 ITKQ08881 620 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 GRIK4Q16099 956 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 SEPT7Q16181 437 aaKnown RBP6.58□□□□□ -1.36
CHD6-202ENST00000373222 NBPF20Q3BBV1 942 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 UNC5AQ6ZN44 842 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 DENND5BQ6ZUT9 1274 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 ZNF354CQ86Y25 554 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 HACE1Q8IYU2 909 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 TNS4Q8IZW8 715 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 ARMC2Q8NEN0 867 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 SLC35F5Q8WV83 523 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 MOCOSQ96EN8 888 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 KCTD15Q96SI1 283 aaPredicted RBP6.58□□□□□ -1.36
CHD6-202ENST00000373222 CYTH2Q99418 400 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 NELL2Q99435 816 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 TSSK1BQ9BXA7 367 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 TMEM120AQ9BXJ8 343 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 KATNBL1Q9H079 304 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 TSPAN10Q9H1Z9 355 aaPredicted RBP6.58□□□□□ -1.36
CHD6-202ENST00000373222 DENND2DQ9H6A0 471 aaPredicted RBP6.58□□□□□ -1.36
CHD6-202ENST00000373222 EBF2Q9HAK2 575 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 ADARB2Q9NS39 739 aaKnown RBP6.58□□□□□ -1.36
CHD6-202ENST00000373222 PCMTD2Q9NV79 361 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 UBP1Q9NZI7 540 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 ZFP69BQ9UJL9 534 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 C15orf41Q9Y2V0 281 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 PSAT1Q9Y617 370 aa6.58□□□□□ -1.36
CHD6-202ENST00000373222 CDH23Q9H251 3354 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 APOL1O14791 398 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 PEX11AO75192 247 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 USP12O75317 370 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 RFPL1O75677 317 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 ZWINTO95229 277 aa6.57□□□□□ -1.36
CHD6-202ENST00000373222 SLC25A27O95847 323 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms