RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 TAF6LQ9Y6J9 622 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 GAKO14976 1311 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 TBC1D12O60347 775 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 SLC11A2P49281 568 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 POLD3Q15054 466 aaPredicted RBP14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 EDRF1Q3B7T1 1238 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 DCAF6Q58WW2 860 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 KDELC2Q7Z4H8 507 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 C4orf19Q8IY42 314 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 C4orf33Q8N1A6 199 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 MMGT1Q8N4V1 131 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 ATP6V0D2Q8N8Y2 350 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 PNPLA8Q9NP80 782 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 GALNT8Q9NY28 637 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 TAGLN3Q9UI15 199 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 L1RE1Q9UN81 338 aa14.36□□□□□ -0.11
RAPGEF1-202ENST00000372190 CLOCKO15516 846 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 RAD51CO43502 376 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 MYL4P12829 197 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 MACC1Q6ZN28 852 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 PSMA8Q8TAA3 256 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 TMEM168Q9H0V1 697 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 RGS17Q9UGC6 210 aaPredicted RBP14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 PCDHAC2Q9Y5I4 1007 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 F8W810 466 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 FNTAP49354 379 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 ALFQ53S48 1182 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 LSM14AQ8ND56 463 aaKnown RBP14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 MND1Q9BWT6 205 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 A1CFQ9NQ94 594 aaKnown RBP14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 AGPAT5Q9NUQ2 364 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 TSR3Q9UJK0 312 aaKnown RBP14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 A0A1W2PQJ5 194 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 HAT1O14929 419 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 GRAP2O75791 330 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 CKMP06732 381 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 RPS6KA3P51812 740 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 SMCO1Q147U7 214 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 C11orf74Q86VG3 221 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 RCOR2Q8IZ40 523 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 OR7A2PQ8NGA2 310 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 SLC30A5Q8TAD4 765 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 CENPIQ92674 756 aaPredicted RBP14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 PABPC5Q96DU9 382 aaKnown RBP14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 PI4K2AQ9BTU6 479 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 KLHL1Q9NR64 748 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 IL17RBQ9NRM6 502 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 HEY2Q9UBP5 337 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 MGAT4AQ9UM21 535 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 RGS10O43665 173 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 NPTX2P47972 431 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 CWF19L1Q69YN2 538 aaKnown RBP14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 NDNQ99608 321 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 TCF4P15884 667 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 OR8H1Q8NGG4 311 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 OR6P1Q8NGX9 317 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 EXD1Q8NHP7 514 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 WDR48Q8TAF3 677 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 FOXP3Q9BZS1 431 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 MARCH7Q9H992 704 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 TRPM5Q9NZQ8 1165 aa14.35□□□□□ -0.11
RAPGEF1-202ENST00000372190 FASP25445 335 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 ACADLP28330 430 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 AVPR1AP37288 418 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 AMPD2Q01433 879 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 ASB12Q8WXK4 309 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 VPS33AQ96AX1 596 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 MCEEQ96PE7 176 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 ISCUQ9H1K1 167 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 PCDH12Q9NPG4 1184 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 FBXL21Q9UKT6 434 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 FOXN3O00409 490 aaPredicted RBP14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 PGK1P00558 417 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 XRCC4Q13426 336 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 TOP3AQ13472 1001 aaPredicted RBP14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 SEC23AQ15436 765 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 CYP4Z1Q86W10 505 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 DEFB118Q96PH6 123 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 ZNF184Q99676 751 aaPredicted RBP14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 GRID1Q9ULK0 1009 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 PHTF1Q9UMS5 762 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 SYNPO2Q9UMS6 1093 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 GSTK1Q9Y2Q3 226 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 IFT172Q9UG01 1749 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 TIMM44O43615 452 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 RB1P06400 928 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 FDPSP14324 419 aaKnown RBP14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 SULT1C3Q6IMI6 304 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 EGFL6Q8IUX8 553 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 ZNF112Q9UJU3 913 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 DUSP12Q9UNI6 340 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 HNMTP50135 292 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 CHN2P52757 468 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 GPAT2Q6NUI2 795 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 PRR23CQ6ZRP0 262 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 TBC1D19Q8N5T2 526 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 COX4I2Q96KJ9 171 aa14.34□□□□□ -0.11
RAPGEF1-202ENST00000372190 RBM15Q96T37 977 aaKnown RBP eCLIP14.34□□□□□ -0.114e-6■■■■■ 29.3
RAPGEF1-202ENST00000372190 TRNAU1APQ9NX07 287 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms