RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 FBXO10Q9UK96 956 aa15.31■□□□□ 0.04
COL9A1-204ENST00000370496 ATG2BQ96BY7 2078 aa15.3■□□□□ 0.04
COL9A1-204ENST00000370496 PRPSAP2O60256 369 aa15.3■□□□□ 0.04
COL9A1-204ENST00000370496 SRGAP2O75044 1071 aa15.3■□□□□ 0.04
COL9A1-204ENST00000370496 PABPC1P11940 636 aaKnown RBP15.3■□□□□ 0.04
COL9A1-204ENST00000370496 FECHP22830 423 aa15.3■□□□□ 0.04
COL9A1-204ENST00000370496 IRAK1P51617 712 aa15.3■□□□□ 0.04
COL9A1-204ENST00000370496 AIF1P55008 147 aa15.3■□□□□ 0.04
COL9A1-204ENST00000370496 MRPS21P82921 87 aaKnown RBP15.3■□□□□ 0.04
COL9A1-204ENST00000370496 SCAPQ12770 1279 aa15.3■□□□□ 0.04
COL9A1-204ENST00000370496 PIGHQ14442 188 aaPredicted RBP15.3■□□□□ 0.04
COL9A1-204ENST00000370496 EIF4HQ15056 248 aaKnown RBP15.3■□□□□ 0.04
COL9A1-204ENST00000370496 RNF43Q68DV7 783 aa15.3■□□□□ 0.04
COL9A1-204ENST00000370496 PKN3Q6P5Z2 889 aa15.3■□□□□ 0.04
COL9A1-204ENST00000370496 CCAR2Q8N163 923 aaKnown RBP15.3■□□□□ 0.04
COL9A1-204ENST00000370496 USP33Q8TEY7 942 aa15.3■□□□□ 0.04
COL9A1-204ENST00000370496 UCMAQ8WVF2 138 aa15.3■□□□□ 0.04
COL9A1-204ENST00000370496 IGSF8Q969P0 613 aa15.3■□□□□ 0.04
COL9A1-204ENST00000370496 BTBD6Q96KE9 485 aa15.3■□□□□ 0.04
COL9A1-204ENST00000370496 C1orf74Q96LT6 269 aa15.3■□□□□ 0.04
COL9A1-204ENST00000370496 NCAPGQ9BPX3 1015 aa15.3■□□□□ 0.04
COL9A1-204ENST00000370496 ZDHHC4Q9NPG8 344 aa15.3■□□□□ 0.04
COL9A1-204ENST00000370496 MUC22E2RYF6 1773 aaPredicted RBP15.3■□□□□ 0.04
COL9A1-204ENST00000370496 DOCK4Q8N1I0 1966 aa15.29■□□□□ 0.04
COL9A1-204ENST00000370496 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.29■□□□□ 0.04
COL9A1-204ENST00000370496 CHURC1-FNTBB4DL54 471 aa15.29■□□□□ 0.04
COL9A1-204ENST00000370496 PRRT4C9JH25 899 aa15.29■□□□□ 0.04
COL9A1-204ENST00000370496 MYO1FO00160 1098 aa15.29■□□□□ 0.04
COL9A1-204ENST00000370496 LRCH4O75427 683 aa15.29■□□□□ 0.04
COL9A1-204ENST00000370496 CLDN11O75508 207 aa15.29■□□□□ 0.04
COL9A1-204ENST00000370496 MOCS3O95396 460 aa15.29■□□□□ 0.04
COL9A1-204ENST00000370496 KLF8O95600 359 aaPredicted RBP15.29■□□□□ 0.04
COL9A1-204ENST00000370496 CD70P32970 193 aa15.29■□□□□ 0.04
COL9A1-204ENST00000370496 CDH4P55283 916 aa15.29■□□□□ 0.04
COL9A1-204ENST00000370496 LMAN2Q12907 356 aa15.29■□□□□ 0.04
COL9A1-204ENST00000370496 ZNF177Q13360 481 aaPredicted RBP15.29■□□□□ 0.04
COL9A1-204ENST00000370496 GAS6Q14393 721 aa15.29■□□□□ 0.04
COL9A1-204ENST00000370496 ANGPT1Q15389 498 aa15.29■□□□□ 0.04
COL9A1-204ENST00000370496 EGFLAMQ63HQ2 1017 aa15.29■□□□□ 0.04
COL9A1-204ENST00000370496 RWDD4Q6NW29 188 aaKnown RBP15.29■□□□□ 0.04
COL9A1-204ENST00000370496 CHST9Q7L1S5 443 aa15.29■□□□□ 0.04
COL9A1-204ENST00000370496 TFAP2DQ7Z6R9 452 aa15.29■□□□□ 0.04
COL9A1-204ENST00000370496 RHOT2Q8IXI1 618 aa15.29■□□□□ 0.04
COL9A1-204ENST00000370496 CHPFQ8IZ52 775 aa15.29■□□□□ 0.04
COL9A1-204ENST00000370496 CCDC33Q8N5R6 958 aa15.29■□□□□ 0.04
COL9A1-204ENST00000370496 ALLCQ8N6M5 410 aa15.29■□□□□ 0.04
COL9A1-204ENST00000370496 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.29■□□□□ 0.04
COL9A1-204ENST00000370496 FIBINQ8TAL6 211 aa15.29■□□□□ 0.04
COL9A1-204ENST00000370496 RFFLQ8WZ73 363 aa15.29■□□□□ 0.04
COL9A1-204ENST00000370496 EPAS1Q99814 870 aa15.29■□□□□ 0.04
COL9A1-204ENST00000370496 ZYG11BQ9C0D3 744 aa15.29■□□□□ 0.04
COL9A1-204ENST00000370496 OR12D3Q9UGF7 316 aa15.29■□□□□ 0.04
COL9A1-204ENST00000370496 PCSK1NQ9UHG2 260 aa15.29■□□□□ 0.04
COL9A1-204ENST00000370496 LCMT1Q9UIC8 334 aa15.29■□□□□ 0.04
COL9A1-204ENST00000370496 INTUQ9ULD6 942 aa15.29■□□□□ 0.04
COL9A1-204ENST00000370496 AP4E1Q9UPM8 1137 aa15.29■□□□□ 0.04
COL9A1-204ENST00000370496 SLC8A2Q9UPR5 921 aa15.29■□□□□ 0.04
COL9A1-204ENST00000370496 A0A0A0MRY4 1105 aa15.28■□□□□ 0.04
COL9A1-204ENST00000370496 NDUFA10O95299 355 aa15.28■□□□□ 0.04
COL9A1-204ENST00000370496 MIPP30301 263 aa15.28■□□□□ 0.04
COL9A1-204ENST00000370496 SSR1P43307 286 aaKnown RBP15.28■□□□□ 0.04
COL9A1-204ENST00000370496 MAGEA1P43355 309 aa15.28■□□□□ 0.04
COL9A1-204ENST00000370496 KIR2DL1P43626 348 aaPredicted RBP15.28■□□□□ 0.04
COL9A1-204ENST00000370496 CXCL12P48061 93 aa15.28■□□□□ 0.04
COL9A1-204ENST00000370496 OXCT1P55809 520 aa15.28■□□□□ 0.04
COL9A1-204ENST00000370496 SATB1Q01826 763 aa15.28■□□□□ 0.04
COL9A1-204ENST00000370496 ACAP1Q15027 740 aa15.28■□□□□ 0.04
COL9A1-204ENST00000370496 E2F5Q15329 346 aa15.28■□□□□ 0.04
COL9A1-204ENST00000370496 FUT11Q495W5 492 aa15.28■□□□□ 0.04
COL9A1-204ENST00000370496 HSF5Q4G112 596 aaPredicted RBP15.28■□□□□ 0.04
COL9A1-204ENST00000370496 EOGTQ5NDL2 527 aa15.28■□□□□ 0.04
COL9A1-204ENST00000370496 EMC10Q5UCC4 262 aa15.28■□□□□ 0.04
COL9A1-204ENST00000370496 DAB2IPQ5VWQ8 1189 aa15.28■□□□□ 0.04
COL9A1-204ENST00000370496 NIPA2Q8N8Q9 360 aa15.28■□□□□ 0.04
COL9A1-204ENST00000370496 TXNDC5Q8NBS9 432 aaKnown RBP15.28■□□□□ 0.04
COL9A1-204ENST00000370496 KCNV2Q8TDN2 545 aa15.28■□□□□ 0.04
COL9A1-204ENST00000370496 TBC1D31Q96DN5 1066 aa15.28■□□□□ 0.04
COL9A1-204ENST00000370496 PEBP4Q96S96 227 aa15.28■□□□□ 0.04
COL9A1-204ENST00000370496 OSBPL2Q9H1P3 480 aa15.28■□□□□ 0.04
COL9A1-204ENST00000370496 OSGEPQ9NPF4 335 aa15.28■□□□□ 0.04
COL9A1-204ENST00000370496 PRMT8Q9NR22 394 aaPredicted RBP15.28■□□□□ 0.04
COL9A1-204ENST00000370496 GPATCH2LQ9NWQ4 482 aa15.28■□□□□ 0.04
COL9A1-204ENST00000370496 MPP6Q9NZW5 540 aa15.28■□□□□ 0.04
COL9A1-204ENST00000370496 KIAA1522Q9P206 1035 aaPredicted RBP15.28■□□□□ 0.04
COL9A1-204ENST00000370496 FZD10Q9ULW2 581 aa15.28■□□□□ 0.04
COL9A1-204ENST00000370496 MMP17Q9ULZ9 603 aa15.28■□□□□ 0.04
COL9A1-204ENST00000370496 USP18Q9UMW8 372 aa15.28■□□□□ 0.04
COL9A1-204ENST00000370496 IGLV3-10A0A075B6K4 115 aa15.27■□□□□ 0.04
COL9A1-204ENST00000370496 ANTXRLA6NF34 631 aa15.27■□□□□ 0.04
COL9A1-204ENST00000370496 TMEM110-MUSTN1A8MSY1 372 aa15.27■□□□□ 0.04
COL9A1-204ENST00000370496 EIF3CLB5ME19 914 aaKnown RBP15.27■□□□□ 0.04
COL9A1-204ENST00000370496 CREB3O43889 395 aa15.27■□□□□ 0.04
COL9A1-204ENST00000370496 CNTN5O94779 1100 aa15.27■□□□□ 0.04
COL9A1-204ENST00000370496 LCA5LO95447 670 aa15.27■□□□□ 0.04
COL9A1-204ENST00000370496 RHOCP08134 193 aa15.27■□□□□ 0.04
COL9A1-204ENST00000370496 POLR2EP19388 210 aaKnown RBP15.27■□□□□ 0.04
COL9A1-204ENST00000370496 PCK1P35558 622 aa15.27■□□□□ 0.04
COL9A1-204ENST00000370496 CSKP41240 450 aa15.27■□□□□ 0.04
COL9A1-204ENST00000370496 NRG1Q02297 640 aaPredicted RBP15.27■□□□□ 0.04
COL9A1-204ENST00000370496 DMC1Q14565 340 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms