RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 CEP83Q9Y592 693 aa16.72■□□□□ 0.27
VMA21-202ENST00000370361 PCDHB9Q9Y5E1 797 aa16.72■□□□□ 0.27
VMA21-202ENST00000370361 PCDHGB2Q9Y5G2 931 aa16.72■□□□□ 0.27
VMA21-202ENST00000370361 ADAMTS9Q9P2N4 1935 aa16.71■□□□□ 0.27
VMA21-202ENST00000370361 E5RJQ4 531 aa16.71■□□□□ 0.27
VMA21-202ENST00000370361 F5H5T6 163 aa16.71■□□□□ 0.27
VMA21-202ENST00000370361 PAPSS1O43252 624 aaPredicted RBP16.71■□□□□ 0.27
VMA21-202ENST00000370361 HSF2BPO75031 334 aa16.71■□□□□ 0.27
VMA21-202ENST00000370361 SEMA4FO95754 770 aa16.71■□□□□ 0.27
VMA21-202ENST00000370361 CCR1P32246 355 aa16.71■□□□□ 0.27
VMA21-202ENST00000370361 CD70P32970 193 aa16.71■□□□□ 0.27
VMA21-202ENST00000370361 NNMTP40261 264 aa16.71■□□□□ 0.27
VMA21-202ENST00000370361 MATKP42679 507 aa16.71■□□□□ 0.27
VMA21-202ENST00000370361 GRIA4P48058 902 aa16.71■□□□□ 0.27
VMA21-202ENST00000370361 BPIFB4P59827 614 aa16.71■□□□□ 0.27
VMA21-202ENST00000370361 RPS14P62263 151 aaKnown RBP16.71■□□□□ 0.27
VMA21-202ENST00000370361 CDK17Q00537 523 aa16.71■□□□□ 0.27
VMA21-202ENST00000370361 PTK2Q05397 1052 aa16.71■□□□□ 0.27
VMA21-202ENST00000370361 TPD52L1Q16890 204 aaPredicted RBP16.71■□□□□ 0.27
VMA21-202ENST00000370361 DENND1BQ6P3S1 775 aa16.71■□□□□ 0.27
VMA21-202ENST00000370361 ZCCHC9Q8N567 271 aaKnown RBP16.71■□□□□ 0.27
VMA21-202ENST00000370361 KDF1Q8NAX2 398 aaPredicted RBP16.71■□□□□ 0.27
VMA21-202ENST00000370361 STIM2Q9P246 746 aa16.71■□□□□ 0.27
VMA21-202ENST00000370361 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.71■□□□□ 0.27
VMA21-202ENST00000370361 ITIH6Q6UXX5 1313 aa16.7■□□□□ 0.26
VMA21-202ENST00000370361 GOLGA6L7A0A1B0GV03 622 aa16.7■□□□□ 0.26
VMA21-202ENST00000370361 DFNA5O60443 496 aa16.7■□□□□ 0.26
VMA21-202ENST00000370361 TRUB2O95900 331 aaKnown RBP16.7■□□□□ 0.26
VMA21-202ENST00000370361 ABCB4P21439 1286 aa16.7■□□□□ 0.26
VMA21-202ENST00000370361 CSKP41240 450 aa16.7■□□□□ 0.26
VMA21-202ENST00000370361 VASPP50552 380 aaPredicted RBP16.7■□□□□ 0.26
VMA21-202ENST00000370361 RPS24P62847 133 aaKnown RBP16.7■□□□□ 0.26
VMA21-202ENST00000370361 SUZ12Q15022 739 aaKnown RBP16.7■□□□□ 0.26
VMA21-202ENST00000370361 DCAF6Q58WW2 860 aa16.7■□□□□ 0.26
VMA21-202ENST00000370361 CT47A1Q5JQC4 288 aaPredicted RBP16.7■□□□□ 0.26
VMA21-202ENST00000370361 RABGAP1LQ5R372 815 aa16.7■□□□□ 0.26
VMA21-202ENST00000370361 ACBD5Q5T8D3 534 aaPredicted RBP16.7■□□□□ 0.26
VMA21-202ENST00000370361 RNF219Q5W0B1 726 aaPredicted RBP16.7■□□□□ 0.26
VMA21-202ENST00000370361 GLRX5Q86SX6 157 aa16.7■□□□□ 0.26
VMA21-202ENST00000370361 CHSY1Q86X52 802 aa16.7■□□□□ 0.26
VMA21-202ENST00000370361 ZDHHC17Q8IUH5 632 aa16.7■□□□□ 0.26
VMA21-202ENST00000370361 NAXDQ8IW45 347 aa16.7■□□□□ 0.26
VMA21-202ENST00000370361 CARNMT1Q8N4J0 409 aa16.7■□□□□ 0.26
VMA21-202ENST00000370361 C1orf216Q8TAB5 229 aa16.7■□□□□ 0.26
VMA21-202ENST00000370361 WFDC5Q8TCV5 224 aa16.7■□□□□ 0.26
VMA21-202ENST00000370361 SKA1Q96BD8 255 aa16.7■□□□□ 0.26
VMA21-202ENST00000370361 SCNM1Q9BWG6 230 aa16.7■□□□□ 0.26
VMA21-202ENST00000370361 NUCKS1Q9H1E3 243 aaKnown RBP16.7■□□□□ 0.26
VMA21-202ENST00000370361 FSCN3Q9NQT6 498 aa16.7■□□□□ 0.26
VMA21-202ENST00000370361 RRN3Q9NYV6 651 aa16.7■□□□□ 0.26
VMA21-202ENST00000370361 EIF2B4Q9UI10 523 aaKnown RBP16.7■□□□□ 0.26
VMA21-202ENST00000370361 FZD4Q9ULV1 537 aa16.7■□□□□ 0.26
VMA21-202ENST00000370361 MSRB2Q9Y3D2 182 aa16.7■□□□□ 0.26
VMA21-202ENST00000370361 USP24Q9UPU5 2620 aa16.69■□□□□ 0.26
VMA21-202ENST00000370361 EDDM13A0A1B0GTR0 161 aa16.69■□□□□ 0.26
VMA21-202ENST00000370361 A0A1B0GVM2 712 aa16.69■□□□□ 0.26
VMA21-202ENST00000370361 FAM221BA6H8Z2 402 aa16.69■□□□□ 0.26
VMA21-202ENST00000370361 TCAF2A6NFQ2 919 aa16.69■□□□□ 0.26
VMA21-202ENST00000370361 KCNU1A8MYU2 1149 aa16.69■□□□□ 0.26
VMA21-202ENST00000370361 FLRT2O43155 660 aa16.69■□□□□ 0.26
VMA21-202ENST00000370361 MOCS2O96007 188 aaPredicted RBP16.69■□□□□ 0.26
VMA21-202ENST00000370361 TACR2P21452 398 aa16.69■□□□□ 0.26
VMA21-202ENST00000370361 CD27P26842 260 aa16.69■□□□□ 0.26
VMA21-202ENST00000370361 PON1P27169 355 aa16.69■□□□□ 0.26
VMA21-202ENST00000370361 MAOBP27338 520 aa16.69■□□□□ 0.26
VMA21-202ENST00000370361 MTIF2P46199 727 aaKnown RBP16.69■□□□□ 0.26
VMA21-202ENST00000370361 ECT2LQ008S8 904 aa16.69■□□□□ 0.26
VMA21-202ENST00000370361 EIF4EBP2Q13542 120 aaPredicted RBP16.69■□□□□ 0.26
VMA21-202ENST00000370361 TRIP6Q15654 476 aaKnown RBP16.69■□□□□ 0.26
VMA21-202ENST00000370361 MAN2A1Q16706 1144 aa16.69■□□□□ 0.26
VMA21-202ENST00000370361 PITRM1Q5JRX3 1037 aa16.69■□□□□ 0.26
VMA21-202ENST00000370361 SYPL2Q5VXT5 272 aa16.69■□□□□ 0.26
VMA21-202ENST00000370361 LRSAM1Q6UWE0 723 aa16.69■□□□□ 0.26
VMA21-202ENST00000370361 C11orf57Q6ZUT1 292 aaPredicted RBP16.69■□□□□ 0.26
VMA21-202ENST00000370361 LGI2Q8N0V4 545 aa16.69■□□□□ 0.26
VMA21-202ENST00000370361 C1orf131Q8NDD1 294 aaKnown RBP16.69■□□□□ 0.26
VMA21-202ENST00000370361 MYO19Q96H55 970 aa16.69■□□□□ 0.26
VMA21-202ENST00000370361 PPP1R13BQ96KQ4 1090 aa16.69■□□□□ 0.26
VMA21-202ENST00000370361 SLC2A13Q96QE2 648 aa16.69■□□□□ 0.26
VMA21-202ENST00000370361 CRACR2AQ9BSW2 395 aa16.69■□□□□ 0.26
VMA21-202ENST00000370361 PABPC3Q9H361 631 aaKnown RBP16.69■□□□□ 0.26
VMA21-202ENST00000370361 FAM204AQ9H8W3 233 aa16.69■□□□□ 0.26
VMA21-202ENST00000370361 ADAMTS1Q9UHI8 967 aa16.69■□□□□ 0.26
VMA21-202ENST00000370361 APOBEC2Q9Y235 224 aaKnown RBP16.69■□□□□ 0.26
VMA21-202ENST00000370361 PAXBP1Q9Y5B6 917 aa16.69■□□□□ 0.26
VMA21-202ENST00000370361 LRRC72A6NJI9 287 aa16.68■□□□□ 0.26
VMA21-202ENST00000370361 BECN2A8MW95 431 aa16.68■□□□□ 0.26
VMA21-202ENST00000370361 ADH1BP00325 375 aa16.68■□□□□ 0.26
VMA21-202ENST00000370361 ERCC5P28715 1186 aaPredicted RBP16.68■□□□□ 0.26
VMA21-202ENST00000370361 ACSL1P33121 698 aa16.68■□□□□ 0.26
VMA21-202ENST00000370361 KRT9P35527 623 aa16.68■□□□□ 0.26
VMA21-202ENST00000370361 USP8P40818 1118 aa16.68■□□□□ 0.26
VMA21-202ENST00000370361 PLK1P53350 603 aa16.68■□□□□ 0.26
VMA21-202ENST00000370361 ARHGAP44Q17R89 818 aa16.68■□□□□ 0.26
VMA21-202ENST00000370361 ZC3H12AQ5D1E8 599 aaKnown RBP16.68■□□□□ 0.26
VMA21-202ENST00000370361 FAM124AQ86V42 546 aa16.68■□□□□ 0.26
VMA21-202ENST00000370361 CACUL1Q86Y37 369 aa16.68■□□□□ 0.26
VMA21-202ENST00000370361 CREBRFQ8IUR6 639 aa16.68■□□□□ 0.26
VMA21-202ENST00000370361 SNX19Q92543 992 aa16.68■□□□□ 0.26
VMA21-202ENST00000370361 CDC6Q99741 560 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms