RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 DGKGP49619 791 aa16.02■□□□□ 0.16
PRPF38B-202ENST00000370022 OXCT1P55809 520 aa16.02■□□□□ 0.16
PRPF38B-202ENST00000370022 GRSF1Q12849 480 aaKnown RBP eCLIP16.02■□□□□ 0.16
PRPF38B-202ENST00000370022 SEMA3BQ13214 749 aa16.02■□□□□ 0.16
PRPF38B-202ENST00000370022 TMEM196Q5HYL7 178 aa16.02■□□□□ 0.16
PRPF38B-202ENST00000370022 KCNT1Q5JUK3 1230 aa16.02■□□□□ 0.16
PRPF38B-202ENST00000370022 C12orf40Q86WS4 652 aa16.02■□□□□ 0.16
PRPF38B-202ENST00000370022 MFN1Q8IWA4 741 aa16.02■□□□□ 0.16
PRPF38B-202ENST00000370022 RHOT1Q8IXI2 618 aa16.02■□□□□ 0.16
PRPF38B-202ENST00000370022 NAT16Q8N8M0 369 aa16.02■□□□□ 0.16
PRPF38B-202ENST00000370022 FIBINQ8TAL6 211 aa16.02■□□□□ 0.16
PRPF38B-202ENST00000370022 KIAA1524Q8TCG1 905 aa16.02■□□□□ 0.16
PRPF38B-202ENST00000370022 TBC1D31Q96DN5 1066 aa16.02■□□□□ 0.16
PRPF38B-202ENST00000370022 MYEOVQ96EZ4 313 aa16.02■□□□□ 0.16
PRPF38B-202ENST00000370022 P2RY11Q96G91 374 aa16.02■□□□□ 0.16
PRPF38B-202ENST00000370022 OSBPL6Q9BZF3 934 aa16.02■□□□□ 0.16
PRPF38B-202ENST00000370022 ZWILCHQ9H900 591 aa16.02■□□□□ 0.16
PRPF38B-202ENST00000370022 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.02■□□□□ 0.16
PRPF38B-202ENST00000370022 SNX10Q9Y5X0 201 aa16.02■□□□□ 0.16
PRPF38B-202ENST00000370022 A0A0A0MRY4 1105 aa16.01■□□□□ 0.15
PRPF38B-202ENST00000370022 SHISA7A6NL88 538 aa16.01■□□□□ 0.15
PRPF38B-202ENST00000370022 H0Y626 953 aa16.01■□□□□ 0.15
PRPF38B-202ENST00000370022 FGF10O15520 208 aaPredicted RBP16.01■□□□□ 0.15
PRPF38B-202ENST00000370022 TCF4P15884 667 aa16.01■□□□□ 0.15
PRPF38B-202ENST00000370022 HOXC13P31276 330 aa16.01■□□□□ 0.15
PRPF38B-202ENST00000370022 GRIA2P42262 883 aa16.01■□□□□ 0.15
PRPF38B-202ENST00000370022 HCAR3P49019 387 aa16.01■□□□□ 0.15
PRPF38B-202ENST00000370022 GALK1P51570 392 aa16.01■□□□□ 0.15
PRPF38B-202ENST00000370022 CDH18Q13634 790 aa16.01■□□□□ 0.15
PRPF38B-202ENST00000370022 SMTNL2Q2TAL5 461 aa16.01■□□□□ 0.15
PRPF38B-202ENST00000370022 GRAMD4Q6IC98 578 aa16.01■□□□□ 0.15
PRPF38B-202ENST00000370022 TXNDC11Q6PKC3 985 aa16.01■□□□□ 0.15
PRPF38B-202ENST00000370022 CCAR2Q8N163 923 aaKnown RBP16.01■□□□□ 0.15
PRPF38B-202ENST00000370022 PYROXD2Q8N2H3 581 aa16.01■□□□□ 0.15
PRPF38B-202ENST00000370022 CCDC26Q8TAB7 109 aa16.01■□□□□ 0.15
PRPF38B-202ENST00000370022 MFSD1Q9H3U5 465 aa16.01■□□□□ 0.15
PRPF38B-202ENST00000370022 ARHGEF4Q9NR80 690 aa16.01■□□□□ 0.15
PRPF38B-202ENST00000370022 DONSONQ9NYP3 566 aa16.01■□□□□ 0.15
PRPF38B-202ENST00000370022 STIM2Q9P246 746 aa16.01■□□□□ 0.15
PRPF38B-202ENST00000370022 TRIM10Q9UDY6 481 aa16.01■□□□□ 0.15
PRPF38B-202ENST00000370022 GUCA1BQ9UMX6 200 aa16.01■□□□□ 0.15
PRPF38B-202ENST00000370022 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16■□□□□ 0.15
PRPF38B-202ENST00000370022 A0A0U1RQJ8 604 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 TMEM221A6NGB7 291 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 FAM72CH0Y354 149 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 M0R296 226 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 PSTPIP1O43586 416 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 CREB3O43889 395 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 APODP05090 189 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 CISD3P0C7P0 127 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 RHOQP17081 205 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 SLC6A11P48066 632 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 TAS2R40P59535 323 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 ZNF177Q13360 481 aaPredicted RBP16■□□□□ 0.15
PRPF38B-202ENST00000370022 SLC12A1Q13621 1099 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 PDK2Q15119 407 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 PON2Q15165 354 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 FAM72AQ5TYM5 149 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 TXNRD3NBQ6F5E7 133 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 FAM72DQ6L9T8 149 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 RWDD4Q6NW29 188 aaKnown RBP16■□□□□ 0.15
PRPF38B-202ENST00000370022 SETD3Q86TU7 594 aaPredicted RBP16■□□□□ 0.15
PRPF38B-202ENST00000370022 FAM72BQ86X60 149 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 MAP7D3Q8IWC1 876 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 PHTF2Q8N3S3 785 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 CARNMT1Q8N4J0 409 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 LRRC57Q8N9N7 239 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 ATRIPQ8WXE1 791 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 HSPH1Q92598 858 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 CATSPERBQ9H7T0 1116 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 TBC1D17Q9HA65 648 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 LTB4R2Q9NPC1 389 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 LZTFL1Q9NQ48 299 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 GPATCH2LQ9NWQ4 482 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 DDX56Q9NY93 547 aaKnown RBP16■□□□□ 0.15
PRPF38B-202ENST00000370022 RCOR3Q9P2K3 495 aaPredicted RBP16■□□□□ 0.15
PRPF38B-202ENST00000370022 TBC1D30Q9Y2I9 924 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16■□□□□ 0.15
PRPF38B-202ENST00000370022 GRID2IPA4D2P6 1211 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 EEF2KO00418 725 aaKnown RBP16■□□□□ 0.15
PRPF38B-202ENST00000370022 NCAM2O15394 837 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 KAT7O95251 611 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 EPHB2P29323 1055 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 ARL4AP40617 200 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 TPI1P60174 286 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 KRT81Q14533 505 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 CA9Q16790 459 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 FBXO43Q4G163 708 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 ALFQ53S48 1182 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 PPP6R3Q5H9R7 873 aaPredicted RBP16■□□□□ 0.15
PRPF38B-202ENST00000370022 ARTNQ5T4W7 220 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 C6orf118Q5T5N4 469 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 ANKS1BQ7Z6G8 1248 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 CPNE8Q86YQ8 564 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 SYNPOQ8N3V7 929 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 DDX51Q8N8A6 666 aaKnown RBP eCLIP16■□□□□ 0.15
PRPF38B-202ENST00000370022 TERB1Q8NA31 727 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 FAM71BQ8TC56 605 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 WFIKKN2Q8TEU8 576 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 KCTD15Q96SI1 283 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms