RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 GSTK1Q9Y2Q3 226 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 VPS4BO75351 444 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 SEC22BO75396 215 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 PGM3O95394 542 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 TAF13Q15543 124 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 CBWD3Q5JTY5 395 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 GNASQ5JWF2 1037 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 SPANXN3Q5MJ09 141 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 CBWD5Q5RIA9 395 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 ZSWIM2Q8NEG5 633 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 CDK5RAP1Q96SZ6 601 aaKnown RBP12.7□□□□□ -0.38
HCFC1-202ENST00000369984 SLC9A7Q96T83 725 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 EHD3Q9NZN3 535 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 ZNF222Q9UK12 451 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 WWP2O00308 870 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 TKTP29401 623 aaKnown RBP12.7□□□□□ -0.38
HCFC1-202ENST00000369984 WEE1P30291 646 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 NAMPTP43490 491 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 HERVK_113P62684 666 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 SCARA3Q6AZY7 606 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 TCP10LQ8TDR4 215 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 JMJD4Q9H9V9 463 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 USP42Q9H9J4 1324 aaKnown RBP12.7□□□□□ -0.38
HCFC1-202ENST00000369984 VDRP11473 427 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 CCNA2P20248 432 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 IFNLR1Q8IU57 520 aaPredicted RBP12.7□□□□□ -0.38
HCFC1-202ENST00000369984 FBXO39Q8N4B4 442 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 COLEC11Q9BWP8 271 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 N6AMT1Q9Y5N5 214 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 CBX4O00257 560 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 SSNA1O43805 119 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 EGFRP00533 1210 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 CKBP12277 381 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 TAF1CQ15572 869 aaPredicted RBP12.7□□□□□ -0.38
HCFC1-202ENST00000369984 CAMK1DQ8IU85 385 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 CAMKK1Q8N5S9 505 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 GTF3C2Q8WUA4 911 aaPredicted RBP12.7□□□□□ -0.38
HCFC1-202ENST00000369984 SPIRE2Q8WWL2 714 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 ISCA1Q9BUE6 129 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 GANQ9H2C0 597 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 ZBTB7AO95365 584 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 UMPSP11172 480 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 ZNF37AP17032 561 aaPredicted RBP12.7□□□□□ -0.38
HCFC1-202ENST00000369984 NPY2RP49146 381 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 CYP24A1Q07973 514 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 XRCC4Q13426 336 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 CAMK1Q14012 370 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 SUZ12Q15022 739 aaKnown RBP12.7□□□□□ -0.38
HCFC1-202ENST00000369984 OLFML2AQ68BL7 652 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 BHLHE22Q8NFJ8 381 aaPredicted RBP12.7□□□□□ -0.38
HCFC1-202ENST00000369984 BBS4Q96RK4 519 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 CHID1Q9BWS9 393 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 RABGEF1Q9UJ41 708 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 STX11O75558 287 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 LSM8O95777 96 aaKnown RBP12.7□□□□□ -0.38
HCFC1-202ENST00000369984 LRPAP1P30533 357 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 ATG14Q6ZNE5 492 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 FAM126BQ8IXS8 530 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 ZNF518BQ9C0D4 1074 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 KIAA1257Q9ULG3 409 aa12.7□□□□□ -0.38
HCFC1-202ENST00000369984 PPIEQ9UNP9 301 aaKnown RBP12.7□□□□□ -0.38
HCFC1-202ENST00000369984 EPN2O95208 641 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 KCNH1O95259 989 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 PTPN1P18031 435 aaKnown RBP12.69□□□□□ -0.38
HCFC1-202ENST00000369984 TNNI3P19429 210 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 PAX7P23759 505 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 GPR15P49685 360 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 PRKAA2P54646 552 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 CCNG2Q16589 344 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 SPOCD1Q6ZMY3 1216 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 FBXO25Q8TCJ0 367 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 CLCC1Q96S66 551 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 MAP3K14Q99558 947 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 ARMCX1Q9P291 453 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 UNC13BO14795 1591 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 CCDC189A1A4V9 331 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 SNX4O95219 450 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 PTENP60484 403 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 DGCR6Q14129 220 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 ZMYND11Q15326 602 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 TRMT11Q7Z4G4 463 aaKnown RBP12.69□□□□□ -0.38
HCFC1-202ENST00000369984 DAGLAQ9Y4D2 1042 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 ZW10O43264 779 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 SERPINE1P05121 402 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 CKMP06732 381 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 SCNN1BP51168 640 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 BMPR2Q13873 1038 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 ZNF621Q6ZSS3 439 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 RASSF6Q6ZTQ3 369 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 PALB2Q86YC2 1186 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 GPRC5AQ8NFJ5 357 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 PYDC1Q8WXC3 89 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 NLNQ9BYT8 704 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 E9PCH4 1651 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 GPR182O15218 404 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 SLC25A27O95847 323 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 RHOCP08134 193 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 PAPD7Q5XG87 772 aaKnown RBP12.69□□□□□ -0.38
HCFC1-202ENST00000369984 APOPT1Q96IL0 206 aa12.69□□□□□ -0.38
HCFC1-202ENST00000369984 UBQLN1Q9UMX0 589 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms