RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 VAV1P15498 845 aa18.53■□□□□ 0.56
SNX27-202ENST00000368841 ALOX12P18054 663 aa18.53■□□□□ 0.56
SNX27-202ENST00000368841 MFSD7Q6UXD7 560 aa18.53■□□□□ 0.56
SNX27-202ENST00000368841 RBM23Q86U06 439 aaKnown RBP18.53■□□□□ 0.56
SNX27-202ENST00000368841 PPCSQ9HAB8 311 aa18.53■□□□□ 0.56
SNX27-202ENST00000368841 ZNHIT2Q9UHR6 403 aa18.53■□□□□ 0.56
SNX27-202ENST00000368841 ZSCAN5DPP0CG00 497 aa18.53■□□□□ 0.56
SNX27-202ENST00000368841 DGKZQ13574 1117 aa18.53■□□□□ 0.56
SNX27-202ENST00000368841 PLA2G4EQ3MJ16 856 aa18.53■□□□□ 0.56
SNX27-202ENST00000368841 IRAK1BP1Q5VVH5 260 aa18.53■□□□□ 0.56
SNX27-202ENST00000368841 DRG1Q9Y295 367 aaKnown RBP18.53■□□□□ 0.56
SNX27-202ENST00000368841 IFNA16P05015 189 aa18.53■□□□□ 0.56
SNX27-202ENST00000368841 PKNOX1P55347 436 aa18.53■□□□□ 0.56
SNX27-202ENST00000368841 FAM124AQ86V42 546 aa18.53■□□□□ 0.56
SNX27-202ENST00000368841 ARRDC4Q8NCT1 418 aa18.53■□□□□ 0.56
SNX27-202ENST00000368841 RELTQ969Z4 430 aa18.53■□□□□ 0.56
SNX27-202ENST00000368841 NAALADL1Q9UQQ1 740 aa18.53■□□□□ 0.56
SNX27-202ENST00000368841 PRKAB1Q9Y478 270 aa18.53■□□□□ 0.56
SNX27-202ENST00000368841 SNX30Q5VWJ9 437 aa18.52■□□□□ 0.56
SNX27-202ENST00000368841 INTS5Q6P9B9 1019 aaKnown RBP18.52■□□□□ 0.56
SNX27-202ENST00000368841 SYN2Q92777 582 aaPredicted RBP18.52■□□□□ 0.56
SNX27-202ENST00000368841 MPP4Q96JB8 637 aa18.52■□□□□ 0.56
SNX27-202ENST00000368841 ERGIC2Q96RQ1 377 aa18.52■□□□□ 0.56
SNX27-202ENST00000368841 CNPY3Q9BT09 278 aa18.52■□□□□ 0.56
SNX27-202ENST00000368841 CDHR5Q9HBB8 845 aa18.52■□□□□ 0.56
SNX27-202ENST00000368841 HMGCRP04035 888 aa18.52■□□□□ 0.56
SNX27-202ENST00000368841 RPS12P25398 132 aaKnown RBP18.52■□□□□ 0.56
SNX27-202ENST00000368841 CRATP43155 626 aa18.52■□□□□ 0.56
SNX27-202ENST00000368841 SLC15A2Q16348 729 aa18.52■□□□□ 0.56
SNX27-202ENST00000368841 SDHAF4Q5VUM1 108 aa18.52■□□□□ 0.56
SNX27-202ENST00000368841 FBXO25Q8TCJ0 367 aa18.52■□□□□ 0.56
SNX27-202ENST00000368841 WDR41Q9HAD4 459 aa18.52■□□□□ 0.56
SNX27-202ENST00000368841 THG1LQ9NWX6 298 aaKnown RBP18.52■□□□□ 0.56
SNX27-202ENST00000368841 PACSIN3Q9UKS6 424 aa18.52■□□□□ 0.56
SNX27-202ENST00000368841 MTA2O94776 668 aa18.52■□□□□ 0.56
SNX27-202ENST00000368841 YBX3P16989 372 aaKnown RBP eCLIP18.52■□□□□ 0.562e-7■■□□□ 13.3
SNX27-202ENST00000368841 HSPA13P48723 471 aa18.52■□□□□ 0.56
SNX27-202ENST00000368841 CYP4F2P78329 520 aa18.52■□□□□ 0.56
SNX27-202ENST00000368841 TGM3Q08188 693 aa18.52■□□□□ 0.56
SNX27-202ENST00000368841 CYP4F3Q08477 520 aa18.52■□□□□ 0.56
SNX27-202ENST00000368841 TLK2Q86UE8 772 aa18.52■□□□□ 0.56
SNX27-202ENST00000368841 HGH1Q9BTY7 390 aa18.52■□□□□ 0.56
SNX27-202ENST00000368841 DGCR6LQ9BY27 220 aa18.52■□□□□ 0.56
SNX27-202ENST00000368841 RAD51BO15315 384 aa18.52■□□□□ 0.56
SNX27-202ENST00000368841 PPP2R1BP30154 601 aa18.52■□□□□ 0.56
SNX27-202ENST00000368841 SEMA3FQ13275 785 aa18.52■□□□□ 0.56
SNX27-202ENST00000368841 ZNF720Q7Z2F6 126 aa18.52■□□□□ 0.56
SNX27-202ENST00000368841 PDLIM2Q96JY6 352 aa18.52■□□□□ 0.56
SNX27-202ENST00000368841 JCADQ9P266 1359 aa18.52■□□□□ 0.55
SNX27-202ENST00000368841 PHGDHO43175 533 aaKnown RBP18.52■□□□□ 0.55
SNX27-202ENST00000368841 ZMPSTE24O75844 475 aa18.52■□□□□ 0.55
SNX27-202ENST00000368841 MPOP05164 745 aa18.52■□□□□ 0.55
SNX27-202ENST00000368841 GLI1P08151 1106 aa18.52■□□□□ 0.55
SNX27-202ENST00000368841 CTSEP14091 401 aa18.52■□□□□ 0.55
SNX27-202ENST00000368841 CD151P48509 253 aa18.52■□□□□ 0.55
SNX27-202ENST00000368841 SNAP47Q5SQN1 464 aa18.52■□□□□ 0.55
SNX27-202ENST00000368841 ATAD3BQ5T9A4 648 aa18.52■□□□□ 0.55
SNX27-202ENST00000368841 SATB2Q9UPW6 733 aa18.52■□□□□ 0.55
SNX27-202ENST00000368841 DNALI1O14645 258 aaPredicted RBP18.52■□□□□ 0.55
SNX27-202ENST00000368841 SPATA31D3P0C874 917 aa18.52■□□□□ 0.55
SNX27-202ENST00000368841 MAGEA10P43363 369 aaPredicted RBP18.52■□□□□ 0.55
SNX27-202ENST00000368841 TRIQKQ629K1 86 aa18.52■□□□□ 0.55
SNX27-202ENST00000368841 SPATA31D4Q6ZUB0 917 aa18.52■□□□□ 0.55
SNX27-202ENST00000368841 BRSK2Q8IWQ3 736 aa18.52■□□□□ 0.55
SNX27-202ENST00000368841 OMDQ99983 421 aa18.52■□□□□ 0.55
SNX27-202ENST00000368841 OR6B1O95007 311 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 IL1R1P14778 569 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 ARF5P84085 180 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 DMPKQ09013 629 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 RBBP4Q09028 425 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 C16orf72Q14CZ0 275 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 AGBL3Q8NEM8 1001 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 MYCBPAPQ8TBZ2 947 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 TCP10LQ8TDR4 215 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 NLNQ9BYT8 704 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 SPATC1LQ9H0A9 340 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 TRIM17Q9Y577 477 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 USP42Q9H9J4 1324 aaKnown RBP18.51■□□□□ 0.55
SNX27-202ENST00000368841 EPORP19235 508 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 SREBF1P36956 1147 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 TALDO1P37837 337 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 LPIN1Q14693 890 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 CBWD6Q4V339 395 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 SEMA4AQ9H3S1 761 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 MED14O60244 1454 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 RBP1P09455 135 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 NRF1Q16656 503 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 INSCQ1MX18 579 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 SLC26A11Q86WA9 606 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 DEFB106AQ8N104 65 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 EID3Q8N140 333 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 FBXO30Q8TB52 745 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 COQ6Q9Y2Z9 468 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 PFKPQ01813 784 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 CNTN2Q02246 1040 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 EPS8Q12929 822 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 EIF2B5Q13144 721 aaKnown RBP18.51■□□□□ 0.55
SNX27-202ENST00000368841 KIAA1324Q6UXG2 1013 aaKnown RBP18.51■□□□□ 0.55
SNX27-202ENST00000368841 NDNQ99608 321 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 MTG1Q9BT17 334 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms