RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 DUOXA2Q1HG44 320 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 CCDC153Q494R4 210 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 SLC9A4Q6AI14 798 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 SETD3Q86TU7 594 aaPredicted RBP17.87■□□□□ 0.45
CHTOP-203ENST00000368690 CDKL3Q8IVW4 592 aaPredicted RBP17.87■□□□□ 0.45
CHTOP-203ENST00000368690 BBS5Q8N3I7 341 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 CDKL2Q92772 493 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 CDH19Q9H159 772 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 ADAMTS5Q9UNA0 930 aa17.87■□□□□ 0.45
CHTOP-203ENST00000368690 RGSL1A5PLK6 1076 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 TMEM114B3SHH9 223 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 TPP1O14773 563 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 MLNP12872 115 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 KCNA2P16389 499 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 ARL2P36404 184 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 ALDH3B2P48448 385 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 FLOT2Q14254 428 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 ZNF423Q2M1K9 1284 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 PIGGQ5H8A4 983 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 LDLRAD1Q5T700 205 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 ARHGEF16Q5VV41 709 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 SCARA3Q6AZY7 606 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 PACS1Q6VY07 963 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 ZPBP2Q6X784 338 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 BNC2Q6ZN30 1099 aaPredicted RBP17.86■□□□□ 0.45
CHTOP-203ENST00000368690 ATG14Q6ZNE5 492 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 KYQ8NBH2 561 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 TRIM56Q9BRZ2 755 aaKnown RBP17.86■□□□□ 0.45
CHTOP-203ENST00000368690 SHCBP1LQ9BZQ2 653 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 GBA2Q9HCG7 927 aaPredicted RBP17.86■□□□□ 0.45
CHTOP-203ENST00000368690 APPL1Q9UKG1 709 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 DOCK5Q9H7D0 1870 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 hCG_2014768A0A024R1R8 64 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 HK2P52789 917 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 BCAR1P56945 870 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 RAB15P59190 212 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 TRPC3Q13507 836 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 BAATQ14032 418 aaPredicted RBP17.86■□□□□ 0.45
CHTOP-203ENST00000368690 VSIG10LQ86VR7 867 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 RP9Q8TA86 221 aaKnown RBP17.86■□□□□ 0.45
CHTOP-203ENST00000368690 MTMR12Q9C0I1 747 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 COG4Q9H9E3 785 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 XPNPEP3Q9NQH7 507 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 FAIMQ9NVQ4 179 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 PCDHGB4Q9UN71 923 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 KCNH4Q9UQ05 1017 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 SH3GLB1Q9Y371 365 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 PCDHGB5Q9Y5G0 923 aa17.86■□□□□ 0.45
CHTOP-203ENST00000368690 KIAA1217Q5T5P2 1943 aa17.85■□□□□ 0.45
CHTOP-203ENST00000368690 ATP6V1G1O75348 118 aa17.85■□□□□ 0.45
CHTOP-203ENST00000368690 H2AFYO75367 372 aaKnown RBP17.85■□□□□ 0.45
CHTOP-203ENST00000368690 GPD1P21695 349 aa17.85■□□□□ 0.45
CHTOP-203ENST00000368690 ARRB2P32121 409 aa17.85■□□□□ 0.45
CHTOP-203ENST00000368690 GJA5P36382 358 aa17.85■□□□□ 0.45
CHTOP-203ENST00000368690 GALK1P51570 392 aa17.85■□□□□ 0.45
CHTOP-203ENST00000368690 TXNL4AP83876 142 aaKnown RBP17.85■□□□□ 0.45
CHTOP-203ENST00000368690 ZNF699Q32M78 642 aa17.85■□□□□ 0.45
CHTOP-203ENST00000368690 BOLA3Q53S33 107 aa17.85■□□□□ 0.45
CHTOP-203ENST00000368690 ABHD15Q6UXT9 468 aa17.85■□□□□ 0.45
CHTOP-203ENST00000368690 CCDC60Q8IWA6 550 aaPredicted RBP17.85■□□□□ 0.45
CHTOP-203ENST00000368690 MPP5Q8N3R9 675 aa17.85■□□□□ 0.45
CHTOP-203ENST00000368690 PQLC3Q8N755 202 aa17.85■□□□□ 0.45
CHTOP-203ENST00000368690 C2orf69Q8N8R5 385 aa17.85■□□□□ 0.45
CHTOP-203ENST00000368690 CEP70Q8NHQ1 597 aa17.85■□□□□ 0.45
CHTOP-203ENST00000368690 ACAD9Q9H845 621 aa17.85■□□□□ 0.45
CHTOP-203ENST00000368690 NR2E3Q9Y5X4 410 aa17.85■□□□□ 0.45
CHTOP-203ENST00000368690 LRRIQ4A6NIV6 560 aa17.84■□□□□ 0.45
CHTOP-203ENST00000368690 H3BSA7 217 aa17.84■□□□□ 0.45
CHTOP-203ENST00000368690 PRPSAP2O60256 369 aa17.84■□□□□ 0.45
CHTOP-203ENST00000368690 HNRNPCP07910 306 aaKnown RBP eCLIP17.84■□□□□ 0.451e-12■■■■□ 20.4
CHTOP-203ENST00000368690 CD19P15391 556 aa17.84■□□□□ 0.45
CHTOP-203ENST00000368690 IL4RP24394 825 aa17.84■□□□□ 0.45
CHTOP-203ENST00000368690 SEMA5AQ13591 1074 aa17.84■□□□□ 0.45
CHTOP-203ENST00000368690 DPYSQ14117 519 aa17.84■□□□□ 0.45
CHTOP-203ENST00000368690 MTERF2Q49AM1 385 aa17.84■□□□□ 0.45
CHTOP-203ENST00000368690 VWA5B1Q5TIE3 1220 aa17.84■□□□□ 0.45
CHTOP-203ENST00000368690 DUS1LQ6P1R4 473 aaKnown RBP17.84■□□□□ 0.45
CHTOP-203ENST00000368690 IYDQ6PHW0 289 aa17.84■□□□□ 0.45
CHTOP-203ENST00000368690 FASTKD5Q7L8L6 764 aaKnown RBP17.84■□□□□ 0.45
CHTOP-203ENST00000368690 EFCAB3Q8N7B9 438 aa17.84■□□□□ 0.45
CHTOP-203ENST00000368690 LENG8Q96PV6 779 aaPredicted RBP17.84■□□□□ 0.45
CHTOP-203ENST00000368690 FERMT1Q9BQL6 677 aa17.84■□□□□ 0.45
CHTOP-203ENST00000368690 ADPGKQ9BRR6 497 aa17.84■□□□□ 0.45
CHTOP-203ENST00000368690 XYLT2Q9H1B5 865 aa17.84■□□□□ 0.45
CHTOP-203ENST00000368690 JPH1Q9HDC5 661 aaPredicted RBP17.84■□□□□ 0.45
CHTOP-203ENST00000368690 BCAS2O75934 225 aaPredicted RBP17.84■□□□□ 0.45
CHTOP-203ENST00000368690 PSMC3P17980 439 aa17.84■□□□□ 0.45
CHTOP-203ENST00000368690 TUBA4AP68366 448 aa17.84■□□□□ 0.45
CHTOP-203ENST00000368690 TMED1Q13445 227 aa17.84■□□□□ 0.45
CHTOP-203ENST00000368690 PEX6Q13608 980 aa17.84■□□□□ 0.45
CHTOP-203ENST00000368690 RFTN1Q14699 578 aaPredicted RBP17.84■□□□□ 0.45
CHTOP-203ENST00000368690 HERC3Q15034 1050 aa17.84■□□□□ 0.45
CHTOP-203ENST00000368690 KLHL35Q6PF15 583 aa17.84■□□□□ 0.45
CHTOP-203ENST00000368690 CHERPQ8IWX8 916 aaKnown RBP17.84■□□□□ 0.45
CHTOP-203ENST00000368690 DSELQ8IZU8 1212 aa17.84■□□□□ 0.45
CHTOP-203ENST00000368690 PGAM4Q8N0Y7 254 aa17.84■□□□□ 0.45
CHTOP-203ENST00000368690 CPSF7Q8N684 471 aaKnown RBP17.84■□□□□ 0.45
CHTOP-203ENST00000368690 ZBTB8BQ8NAP8 495 aaPredicted RBP17.84■□□□□ 0.45
CHTOP-203ENST00000368690 NLRP7Q8WX94 980 aa17.84■□□□□ 0.45
CHTOP-203ENST00000368690 ISL2Q96A47 359 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms