RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 LRTOMTQ8WZ04 291 aa18.35■□□□□ 0.53
CHTOP-201ENST00000368686 TOP1MTQ969P6 601 aa18.35■□□□□ 0.53
CHTOP-201ENST00000368686 ASB9Q96DX5 294 aa18.35■□□□□ 0.53
CHTOP-201ENST00000368686 OTUD5Q96G74 571 aa18.35■□□□□ 0.53
CHTOP-201ENST00000368686 CCDC17Q96LX7 622 aa18.35■□□□□ 0.53
CHTOP-201ENST00000368686 ZNF641Q96N77 438 aaPredicted RBP18.35■□□□□ 0.53
CHTOP-201ENST00000368686 MROQ9BYG7 248 aa18.35■□□□□ 0.53
CHTOP-201ENST00000368686 PDZD7Q9H5P4 517 aa18.35■□□□□ 0.53
CHTOP-201ENST00000368686 VTA1Q9NP79 307 aa18.35■□□□□ 0.53
CHTOP-201ENST00000368686 HLA-DRAP01903 254 aa18.35■□□□□ 0.53
CHTOP-201ENST00000368686 SLC10A2Q12908 348 aaPredicted RBP18.35■□□□□ 0.53
CHTOP-201ENST00000368686 RAB39AQ14964 217 aa18.35■□□□□ 0.53
CHTOP-201ENST00000368686 INSCQ1MX18 579 aa18.35■□□□□ 0.53
CHTOP-201ENST00000368686 TMEM26Q6ZUK4 368 aa18.35■□□□□ 0.53
CHTOP-201ENST00000368686 CAND1Q86VP6 1230 aaKnown RBP18.35■□□□□ 0.53
CHTOP-201ENST00000368686 GPD1LQ8N335 351 aa18.35■□□□□ 0.53
CHTOP-201ENST00000368686 MINDY2Q8NBR6 621 aa18.35■□□□□ 0.53
CHTOP-201ENST00000368686 PTCD2Q8WV60 388 aaKnown RBP18.35■□□□□ 0.53
CHTOP-201ENST00000368686 ACDQ96AP0 544 aa18.35■□□□□ 0.53
CHTOP-201ENST00000368686 CNDP2Q96KP4 475 aaKnown RBP18.35■□□□□ 0.53
CHTOP-201ENST00000368686 SLC29A1Q99808 456 aa18.35■□□□□ 0.53
CHTOP-201ENST00000368686 MRPL40Q9NQ50 206 aaKnown RBP18.35■□□□□ 0.53
CHTOP-201ENST00000368686 DUS2Q9NX74 493 aaKnown RBP18.35■□□□□ 0.53
CHTOP-201ENST00000368686 DAPK2Q9UIK4 370 aa18.35■□□□□ 0.53
CHTOP-201ENST00000368686 CNTN6Q9UQ52 1028 aa18.35■□□□□ 0.53
CHTOP-201ENST00000368686 ERVK-11Q9UQG0 969 aa18.35■□□□□ 0.53
CHTOP-201ENST00000368686 TADA2AO75478 443 aa18.34■□□□□ 0.53
CHTOP-201ENST00000368686 LSM8O95777 96 aaKnown RBP18.34■□□□□ 0.53
CHTOP-201ENST00000368686 MX2P20592 715 aa18.34■□□□□ 0.53
CHTOP-201ENST00000368686 DPP6P42658 865 aa18.34■□□□□ 0.53
CHTOP-201ENST00000368686 PMS2P3Q13401 168 aa18.34■□□□□ 0.53
CHTOP-201ENST00000368686 ARL13BQ3SXY8 428 aa18.34■□□□□ 0.53
CHTOP-201ENST00000368686 TRMT10BQ6PF06 316 aaKnown RBP18.34■□□□□ 0.53
CHTOP-201ENST00000368686 TTC30AQ86WT1 665 aa18.34■□□□□ 0.53
CHTOP-201ENST00000368686 UHRF1Q96T88 793 aaPredicted RBP18.34■□□□□ 0.53
CHTOP-201ENST00000368686 EFCAB1Q9HAE3 211 aa18.34■□□□□ 0.53
CHTOP-201ENST00000368686 GPRC5DQ9NZD1 345 aa18.34■□□□□ 0.53
CHTOP-201ENST00000368686 KLHL3Q9UH77 587 aa18.34■□□□□ 0.53
CHTOP-201ENST00000368686 CTDP1Q9Y5B0 961 aaPredicted RBP18.34■□□□□ 0.53
CHTOP-201ENST00000368686 AKAP10O43572 662 aa18.34■□□□□ 0.53
CHTOP-201ENST00000368686 CSPG5O95196 566 aa18.34■□□□□ 0.53
CHTOP-201ENST00000368686 HSPA4LO95757 839 aa18.34■□□□□ 0.53
CHTOP-201ENST00000368686 ALOX5P09917 674 aa18.34■□□□□ 0.53
CHTOP-201ENST00000368686 YBX3P16989 372 aaKnown RBP eCLIP18.34■□□□□ 0.53
CHTOP-201ENST00000368686 FGFR3P22607 806 aa18.34■□□□□ 0.53
CHTOP-201ENST00000368686 MYF6P23409 242 aa18.34■□□□□ 0.53
CHTOP-201ENST00000368686 PSMA2P25787 234 aa18.34■□□□□ 0.53
CHTOP-201ENST00000368686 GNL1P36915 607 aaPredicted RBP18.34■□□□□ 0.53
CHTOP-201ENST00000368686 PRAMEP78395 509 aa18.34■□□□□ 0.53
CHTOP-201ENST00000368686 NFATC3Q12968 1075 aa18.34■□□□□ 0.53
CHTOP-201ENST00000368686 PPP6R3Q5H9R7 873 aaPredicted RBP18.34■□□□□ 0.53
CHTOP-201ENST00000368686 MTX3Q5HYI7 312 aa18.34■□□□□ 0.53
CHTOP-201ENST00000368686 MFSD14BQ5SR56 506 aa18.34■□□□□ 0.53
CHTOP-201ENST00000368686 CYP2U1Q7Z449 544 aa18.34■□□□□ 0.53
CHTOP-201ENST00000368686 IGFN1Q86VF2 1251 aa18.34■□□□□ 0.53
CHTOP-201ENST00000368686 CPSF7Q8N684 471 aaKnown RBP18.34■□□□□ 0.53
CHTOP-201ENST00000368686 SREK1Q8WXA9 508 aaKnown RBP18.34■□□□□ 0.53
CHTOP-201ENST00000368686 SLC7A3Q8WY07 619 aa18.34■□□□□ 0.53
CHTOP-201ENST00000368686 OR52B2Q96RD2 323 aa18.34■□□□□ 0.53
CHTOP-201ENST00000368686 CD209Q9NNX6 404 aa18.34■□□□□ 0.53
CHTOP-201ENST00000368686 NYAP2Q9P242 653 aa18.34■□□□□ 0.53
CHTOP-201ENST00000368686 SUCOQ9UBS9 1254 aaKnown RBP18.34■□□□□ 0.53
CHTOP-201ENST00000368686 DAGLAQ9Y4D2 1042 aa18.34■□□□□ 0.53
CHTOP-201ENST00000368686 STRCP1A6NGW2 1772 aa18.34■□□□□ 0.53
CHTOP-201ENST00000368686 RGPD3A6NKT7 1758 aaPredicted RBP18.34■□□□□ 0.53
CHTOP-201ENST00000368686 RGPD4Q7Z3J3 1758 aa18.34■□□□□ 0.53
CHTOP-201ENST00000368686 TPP1O14773 563 aa18.33■□□□□ 0.53
CHTOP-201ENST00000368686 DYNC1LI2O43237 492 aaPredicted RBP18.33■□□□□ 0.53
CHTOP-201ENST00000368686 ENTPD3O75355 529 aa18.33■□□□□ 0.53
CHTOP-201ENST00000368686 VAPBO95292 243 aa18.33■□□□□ 0.53
CHTOP-201ENST00000368686 ALDOAP04075 364 aaKnown RBP18.33■□□□□ 0.53
CHTOP-201ENST00000368686 HNRNPFP52597 415 aaKnown RBP18.33■□□□□ 0.53
CHTOP-201ENST00000368686 RHDQ02161 417 aa18.33■□□□□ 0.53
CHTOP-201ENST00000368686 GRSF1Q12849 480 aaKnown RBP eCLIP18.33■□□□□ 0.53
CHTOP-201ENST00000368686 IKQ13123 557 aaPredicted RBP18.33■□□□□ 0.53
CHTOP-201ENST00000368686 NOMO1Q15155 1222 aa18.33■□□□□ 0.53
CHTOP-201ENST00000368686 LSM12Q3MHD2 195 aaKnown RBP18.33■□□□□ 0.53
CHTOP-201ENST00000368686 ZACNQ401N2 412 aa18.33■□□□□ 0.53
CHTOP-201ENST00000368686 TBC1D10BQ4KMP7 808 aaPredicted RBP18.33■□□□□ 0.53
CHTOP-201ENST00000368686 KCNT1Q5JUK3 1230 aa18.33■□□□□ 0.53
CHTOP-201ENST00000368686 PPP4R4Q6NUP7 873 aa18.33■□□□□ 0.53
CHTOP-201ENST00000368686 ZBTB49Q6ZSB9 765 aa18.33■□□□□ 0.53
CHTOP-201ENST00000368686 COLGALT2Q8IYK4 626 aa18.33■□□□□ 0.53
CHTOP-201ENST00000368686 ZNF781Q8N8C0 355 aa18.33■□□□□ 0.53
CHTOP-201ENST00000368686 ZNF606Q8WXB4 792 aa18.33■□□□□ 0.53
CHTOP-201ENST00000368686 ZNF516Q92618 1163 aa18.33■□□□□ 0.53
CHTOP-201ENST00000368686 CIB1Q99828 191 aa18.33■□□□□ 0.53
CHTOP-201ENST00000368686 EFHD1Q9BUP0 239 aa18.33■□□□□ 0.53
CHTOP-201ENST00000368686 CYP26B1Q9NR63 512 aa18.33■□□□□ 0.53
CHTOP-201ENST00000368686 SNX13Q9Y5W8 968 aa18.33■□□□□ 0.53
CHTOP-201ENST00000368686 CPQQ9Y646 472 aa18.33■□□□□ 0.53
CHTOP-201ENST00000368686 WDR64B1ANS9 1081 aa18.33■□□□□ 0.52
CHTOP-201ENST00000368686 GCATO75600 419 aa18.33■□□□□ 0.52
CHTOP-201ENST00000368686 STAM2O75886 525 aa18.33■□□□□ 0.52
CHTOP-201ENST00000368686 TAL1P17542 331 aaPredicted RBP18.33■□□□□ 0.52
CHTOP-201ENST00000368686 CCNA2P20248 432 aa18.33■□□□□ 0.52
CHTOP-201ENST00000368686 IL1R2P27930 398 aa18.33■□□□□ 0.52
CHTOP-201ENST00000368686 MAGEA6P43360 314 aa18.33■□□□□ 0.52
CHTOP-201ENST00000368686 TRAF2Q12933 501 aa18.33■□□□□ 0.52
CHTOP-201ENST00000368686 GALNT18Q6P9A2 607 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms