RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 SLC26A9Q7LBE3 791 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 THEM5Q8N1Q8 247 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 FNIP1Q8TF40 1166 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 SPOCK2Q92563 424 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 GALNT8Q9NY28 637 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 LRRC42Q9Y546 428 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 NUP205Q92621 2012 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 FAM72CH0Y354 149 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 GOLGA8RI6L899 631 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 SCAMP3O14828 347 aaKnown RBP10.97□□□□□ -0.65
TPM3-212ENST00000368533 ADAM12O43184 909 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 ALDH2P05091 517 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 TPBGLP0DKB5 382 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 RBP3P10745 1247 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 SKIP12755 728 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 ATP6V1C1P21283 382 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 EIF3EP60228 445 aaKnown RBP10.97□□□□□ -0.65
TPM3-212ENST00000368533 DEUP1Q05D60 604 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 MYBPC3Q14896 1274 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 FAM72AQ5TYM5 149 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 FAM72DQ6L9T8 149 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 CEP128Q6ZU80 1094 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 FAM72BQ86X60 149 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 TEX9Q8N6V9 391 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 ANKLE1Q8NAG6 615 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 PCDH19Q8TAB3 1148 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 GIPC2Q8TF65 315 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 PYROXD1Q8WU10 500 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 DNAJC9Q8WXX5 260 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 SUSD3Q96L08 255 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 KCTD15Q96SI1 283 aaPredicted RBP10.97□□□□□ -0.65
TPM3-212ENST00000368533 KLF6Q99612 283 aaPredicted RBP10.97□□□□□ -0.65
TPM3-212ENST00000368533 PCDH18Q9HCL0 1135 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 PIH1D1Q9NWS0 290 aaKnown RBP10.97□□□□□ -0.65
TPM3-212ENST00000368533 DDX56Q9NY93 547 aaKnown RBP10.97□□□□□ -0.65
TPM3-212ENST00000368533 HAO1Q9UJM8 370 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 ADAM28Q9UKQ2 775 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 PRRC2BQ5JSZ5 2229 aaKnown RBP10.97□□□□□ -0.65
TPM3-212ENST00000368533 I6L893 689 aaPredicted RBP10.97□□□□□ -0.65
TPM3-212ENST00000368533 ZBED1O96006 694 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 HMBSP08397 361 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 ZCCHC18P0CG32 403 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 CALB2P22676 271 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 IL4RP24394 825 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 MATKP42679 507 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 SLC5A3P53794 718 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 VCPP55072 806 aaKnown RBP10.97□□□□□ -0.65
TPM3-212ENST00000368533 DAOAP59103 153 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 BASP1P80723 227 aaKnown RBP10.97□□□□□ -0.65
TPM3-212ENST00000368533 DSC1Q08554 894 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 MGAT5BQ3V5L5 792 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 OTUD1Q5VV17 481 aaPredicted RBP10.97□□□□□ -0.65
TPM3-212ENST00000368533 OR52E8Q6IFG1 317 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 DARS2Q6PI48 645 aaKnown RBP10.97□□□□□ -0.65
TPM3-212ENST00000368533 ALLCQ8N6M5 410 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 DEPDC1BQ8WUY9 529 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 HSFY1Q96LI6 401 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 NDNQ99608 321 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 CRISPLD1Q9H336 500 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 RNPEPL1Q9HAU8 725 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 UBN1Q9NPG3 1134 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 BLOC1S6Q9UL45 172 aa10.97□□□□□ -0.65
TPM3-212ENST00000368533 ZBBXA8MT70 800 aa10.96□□□□□ -0.65
TPM3-212ENST00000368533 TBX18O95935 607 aa10.96□□□□□ -0.65
TPM3-212ENST00000368533 RPLP2P05387 115 aaKnown RBP10.96□□□□□ -0.65
TPM3-212ENST00000368533 UBTFL6P0CB48 400 aaPredicted RBP10.96□□□□□ -0.65
TPM3-212ENST00000368533 SRGAP2BP0DMP2 458 aa10.96□□□□□ -0.65
TPM3-212ENST00000368533 FOXN2P32314 431 aa10.96□□□□□ -0.65
TPM3-212ENST00000368533 USP46P62068 366 aa10.96□□□□□ -0.65
TPM3-212ENST00000368533 HIF1AQ16665 826 aa10.96□□□□□ -0.65
TPM3-212ENST00000368533 ASRGL1Q7L266 308 aa10.96□□□□□ -0.65
TPM3-212ENST00000368533 PALM2Q8IXS6 379 aa10.96□□□□□ -0.65
TPM3-212ENST00000368533 MAGEB18Q96M61 343 aa10.96□□□□□ -0.65
TPM3-212ENST00000368533 ACBD6Q9BR61 282 aa10.96□□□□□ -0.65
TPM3-212ENST00000368533 SLCO1B3Q9NPD5 702 aa10.96□□□□□ -0.65
TPM3-212ENST00000368533 MARCH5Q9NX47 278 aa10.96□□□□□ -0.65
TPM3-212ENST00000368533 PCDHGA4Q9Y5G9 962 aa10.96□□□□□ -0.65
TPM3-212ENST00000368533 M0QZQ0 153 aa10.96□□□□□ -0.66
TPM3-212ENST00000368533 SSTR1P30872 391 aa10.96□□□□□ -0.66
TPM3-212ENST00000368533 CCNFP41002 786 aa10.96□□□□□ -0.66
TPM3-212ENST00000368533 ACADSBP45954 432 aa10.96□□□□□ -0.66
TPM3-212ENST00000368533 SPARCL1Q14515 664 aa10.96□□□□□ -0.66
TPM3-212ENST00000368533 SETDB1Q15047 1291 aa10.96□□□□□ -0.66
TPM3-212ENST00000368533 EFHC1Q5JVL4 640 aa10.96□□□□□ -0.66
TPM3-212ENST00000368533 LRRC38Q5VT99 294 aa10.96□□□□□ -0.66
TPM3-212ENST00000368533 BSPRYQ5W0U4 402 aa10.96□□□□□ -0.66
TPM3-212ENST00000368533 CMASQ8NFW8 434 aaPredicted RBP10.96□□□□□ -0.66
TPM3-212ENST00000368533 LRRC8CQ8TDW0 803 aa10.96□□□□□ -0.66
TPM3-212ENST00000368533 TTC25Q96NG3 672 aa10.96□□□□□ -0.66
TPM3-212ENST00000368533 FTHL17Q9BXU8 183 aa10.96□□□□□ -0.66
TPM3-212ENST00000368533 PHACTR1Q9C0D0 580 aa10.96□□□□□ -0.66
TPM3-212ENST00000368533 POPDC2Q9HBU9 364 aa10.96□□□□□ -0.66
TPM3-212ENST00000368533 ALG13Q9NP73 1137 aaKnown RBP10.96□□□□□ -0.66
TPM3-212ENST00000368533 SEPT10Q9P0V9 454 aa10.96□□□□□ -0.66
TPM3-212ENST00000368533 A0A1W2PPM1 405 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 TCRBV7S3A2A0A539 114 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 HHLA1C9JL84 531 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 LTFP02788 710 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 EPHB2P29323 1055 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 GSTT1P30711 240 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms