RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 TRMT11Q7Z4G4 463 aaKnown RBP23.18■■□□□ 1.3
ECHDC1-203ENST00000368291 CARNMT1Q8N4J0 409 aa23.18■■□□□ 1.3
ECHDC1-203ENST00000368291 SORCS1Q8WY21 1168 aa23.18■■□□□ 1.3
ECHDC1-203ENST00000368291 MCEEQ96PE7 176 aa23.18■■□□□ 1.3
ECHDC1-203ENST00000368291 SIK2Q9H0K1 926 aa23.18■■□□□ 1.3
ECHDC1-203ENST00000368291 THAP10Q9P2Z0 257 aaPredicted RBP23.18■■□□□ 1.3
ECHDC1-203ENST00000368291 INTS6Q9UL03 887 aaKnown RBP23.18■■□□□ 1.3
ECHDC1-203ENST00000368291 VANGL2Q9ULK5 521 aa23.18■■□□□ 1.3
ECHDC1-203ENST00000368291 PAXBP1Q9Y5B6 917 aa23.18■■□□□ 1.3
ECHDC1-203ENST00000368291 PLXND1Q9Y4D7 1925 aa23.18■■□□□ 1.3
ECHDC1-203ENST00000368291 A0A1W2PQF6 199 aa23.17■■□□□ 1.3
ECHDC1-203ENST00000368291 WASH3PC4AMC7 463 aa23.17■■□□□ 1.3
ECHDC1-203ENST00000368291 HRO43593 1189 aa23.17■■□□□ 1.3
ECHDC1-203ENST00000368291 APBB3O95704 486 aa23.17■■□□□ 1.3
ECHDC1-203ENST00000368291 GPD1P21695 349 aa23.17■■□□□ 1.3
ECHDC1-203ENST00000368291 OGDHQ02218 1023 aa23.17■■□□□ 1.3
ECHDC1-203ENST00000368291 MAMLD1Q13495 774 aa23.17■■□□□ 1.3
ECHDC1-203ENST00000368291 ENPP2Q13822 863 aa23.17■■□□□ 1.3
ECHDC1-203ENST00000368291 TRIM14Q14142 442 aa23.17■■□□□ 1.3
ECHDC1-203ENST00000368291 EIF4HQ15056 248 aaKnown RBP23.17■■□□□ 1.3
ECHDC1-203ENST00000368291 RASSF3Q86WH2 238 aa23.17■■□□□ 1.3
ECHDC1-203ENST00000368291 CHPFQ8IZ52 775 aa23.17■■□□□ 1.3
ECHDC1-203ENST00000368291 CCAR2Q8N163 923 aaKnown RBP23.17■■□□□ 1.3
ECHDC1-203ENST00000368291 TSTD1Q8NFU3 115 aa23.17■■□□□ 1.3
ECHDC1-203ENST00000368291 WFIKKN2Q8TEU8 576 aa23.17■■□□□ 1.3
ECHDC1-203ENST00000368291 DNAJC7Q99615 494 aa23.17■■□□□ 1.3
ECHDC1-203ENST00000368291 GABRG3Q99928 467 aa23.17■■□□□ 1.3
ECHDC1-203ENST00000368291 CACNA2D2Q9NY47 1150 aa23.17■■□□□ 1.3
ECHDC1-203ENST00000368291 EBF1Q9UH73 591 aa23.17■■□□□ 1.3
ECHDC1-203ENST00000368291 A0A087X0T9 212 aa23.16■■□□□ 1.3
ECHDC1-203ENST00000368291 FAM228BP0C875 321 aa23.16■■□□□ 1.3
ECHDC1-203ENST00000368291 DGKEP52429 567 aa23.16■■□□□ 1.3
ECHDC1-203ENST00000368291 SRSF5Q13243 272 aaKnown RBP23.16■■□□□ 1.3
ECHDC1-203ENST00000368291 FUT11Q495W5 492 aa23.16■■□□□ 1.3
ECHDC1-203ENST00000368291 ASCL5Q7RTU5 278 aa23.16■■□□□ 1.3
ECHDC1-203ENST00000368291 AHI1Q8N157 1196 aa23.16■■□□□ 1.3
ECHDC1-203ENST00000368291 ZNF557Q8N988 423 aaPredicted RBP23.16■■□□□ 1.3
ECHDC1-203ENST00000368291 FAM172AQ8WUF8 416 aa23.16■■□□□ 1.3
ECHDC1-203ENST00000368291 C1orf74Q96LT6 269 aa23.16■■□□□ 1.3
ECHDC1-203ENST00000368291 CIPCQ9C0C6 399 aa23.16■■□□□ 1.3
ECHDC1-203ENST00000368291 SEMA4AQ9H3S1 761 aa23.16■■□□□ 1.3
ECHDC1-203ENST00000368291 A0A1B0GVM2 712 aa23.15■■□□□ 1.3
ECHDC1-203ENST00000368291 TCAF2A6NFQ2 919 aa23.15■■□□□ 1.3
ECHDC1-203ENST00000368291 CCP110O43303 1012 aa23.15■■□□□ 1.3
ECHDC1-203ENST00000368291 TIMM44O43615 452 aa23.15■■□□□ 1.3
ECHDC1-203ENST00000368291 HOXB2P14652 356 aa23.15■■□□□ 1.3
ECHDC1-203ENST00000368291 IL12RB1P42701 662 aa23.15■■□□□ 1.3
ECHDC1-203ENST00000368291 ZNF143P52747 638 aaPredicted RBP23.15■■□□□ 1.3
ECHDC1-203ENST00000368291 CDH18Q13634 790 aa23.15■■□□□ 1.3
ECHDC1-203ENST00000368291 ZNF234Q14588 700 aa23.15■■□□□ 1.3
ECHDC1-203ENST00000368291 RABGAP1LQ5R372 815 aa23.15■■□□□ 1.3
ECHDC1-203ENST00000368291 TTC39BQ5VTQ0 682 aaPredicted RBP23.15■■□□□ 1.3
ECHDC1-203ENST00000368291 MBLAC2Q68D91 279 aa23.15■■□□□ 1.3
ECHDC1-203ENST00000368291 SUMF1Q8NBK3 374 aa23.15■■□□□ 1.3
ECHDC1-203ENST00000368291 MDGA1Q8NFP4 955 aa23.15■■□□□ 1.3
ECHDC1-203ENST00000368291 UCMAQ8WVF2 138 aa23.15■■□□□ 1.3
ECHDC1-203ENST00000368291 NKD2Q969F2 451 aaPredicted RBP23.15■■□□□ 1.3
ECHDC1-203ENST00000368291 RPRD1AQ96P16 312 aaPredicted RBP23.15■■□□□ 1.3
ECHDC1-203ENST00000368291 HAPLN3Q96S86 360 aa23.15■■□□□ 1.3
ECHDC1-203ENST00000368291 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.15■■□□□ 1.3
ECHDC1-203ENST00000368291 STON1Q9Y6Q2 735 aa23.15■■□□□ 1.3
ECHDC1-203ENST00000368291 CHD5Q8TDI0 1954 aa23.15■■□□□ 1.3
ECHDC1-203ENST00000368291 PRR23AA6NEV1 266 aa23.14■■□□□ 1.3
ECHDC1-203ENST00000368291 H0Y626 953 aa23.14■■□□□ 1.3
ECHDC1-203ENST00000368291 AXIN1O15169 862 aa23.14■■□□□ 1.3
ECHDC1-203ENST00000368291 MRE11P49959 708 aa23.14■■□□□ 1.3
ECHDC1-203ENST00000368291 TBX2Q13207 712 aaPredicted RBP23.14■■□□□ 1.3
ECHDC1-203ENST00000368291 PTPRNQ16849 979 aa23.14■■□□□ 1.3
ECHDC1-203ENST00000368291 ANO7Q6IWH7 933 aa23.14■■□□□ 1.3
ECHDC1-203ENST00000368291 CXorf57Q6NSI4 855 aaKnown RBP23.14■■□□□ 1.3
ECHDC1-203ENST00000368291 KIAA1211LQ6NV74 962 aa23.14■■□□□ 1.3
ECHDC1-203ENST00000368291 DRC7Q8IY82 874 aa23.14■■□□□ 1.3
ECHDC1-203ENST00000368291 ABCA7Q8IZY2 2146 aa23.14■■□□□ 1.3
ECHDC1-203ENST00000368291 OR8K1Q8NGG5 319 aa23.14■■□□□ 1.3
ECHDC1-203ENST00000368291 OR52K2Q8NGK3 314 aa23.14■■□□□ 1.3
ECHDC1-203ENST00000368291 CYB5D2Q8WUJ1 264 aa23.14■■□□□ 1.3
ECHDC1-203ENST00000368291 MAGEB5Q9BZ81 275 aa23.14■■□□□ 1.3
ECHDC1-203ENST00000368291 TRIM5Q9C035 493 aa23.14■■□□□ 1.3
ECHDC1-203ENST00000368291 EPC1Q9H2F5 836 aa23.14■■□□□ 1.3
ECHDC1-203ENST00000368291 PARVAQ9NVD7 372 aa23.14■■□□□ 1.3
ECHDC1-203ENST00000368291 CNOT8Q9UFF9 292 aaKnown RBP23.14■■□□□ 1.3
ECHDC1-203ENST00000368291 NENFQ9UMX5 172 aa23.14■■□□□ 1.3
ECHDC1-203ENST00000368291 RAD54BQ9Y620 910 aa23.14■■□□□ 1.3
ECHDC1-203ENST00000368291 NYNRINQ9P2P1 1898 aaKnown RBP23.14■■□□□ 1.3
ECHDC1-203ENST00000368291 IGLV3-10A0A075B6K4 115 aa23.14■■□□□ 1.29
ECHDC1-203ENST00000368291 DRGXA6NNA5 263 aa23.14■■□□□ 1.29
ECHDC1-203ENST00000368291 NPC1O15118 1278 aa23.14■■□□□ 1.29
ECHDC1-203ENST00000368291 ADRA1BP35368 520 aa23.14■■□□□ 1.29
ECHDC1-203ENST00000368291 ALFQ53S48 1182 aa23.14■■□□□ 1.29
ECHDC1-203ENST00000368291 DCUN1D2Q6PH85 259 aa23.14■■□□□ 1.29
ECHDC1-203ENST00000368291 CCDC185Q8N715 623 aa23.14■■□□□ 1.29
ECHDC1-203ENST00000368291 TTC17Q96AE7 1141 aa23.14■■□□□ 1.29
ECHDC1-203ENST00000368291 ZNF653Q96CK0 615 aa23.14■■□□□ 1.29
ECHDC1-203ENST00000368291 CNPY3Q9BT09 278 aa23.14■■□□□ 1.29
ECHDC1-203ENST00000368291 TRIM7Q9C029 511 aa23.14■■□□□ 1.29
ECHDC1-203ENST00000368291 POLMQ9NP87 494 aaPredicted RBP23.14■■□□□ 1.29
ECHDC1-203ENST00000368291 KIAA1522Q9P206 1035 aaPredicted RBP23.14■■□□□ 1.29
ECHDC1-203ENST00000368291 TCRBV21S2A2A0A5A6 115 aa23.13■■□□□ 1.29
ECHDC1-203ENST00000368291 E9PAM4 449 aa23.13■■□□□ 1.29
ECHDC1-203ENST00000368291 MFAP3LO75121 409 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms