RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 SNIP1Q8TAD8 396 aaKnown RBP7.22□□□□□ -1.25
SPTA1-201ENST00000368147 CALML6Q8TD86 181 aa7.22□□□□□ -1.25
SPTA1-201ENST00000368147 PHF21BQ96EK2 531 aa7.22□□□□□ -1.25
SPTA1-201ENST00000368147 VPS35Q96QK1 796 aa7.22□□□□□ -1.25
SPTA1-201ENST00000368147 CCDC28BQ9BUN5 200 aa7.22□□□□□ -1.25
SPTA1-201ENST00000368147 RTFDC1Q9BY42 306 aaPredicted RBP7.22□□□□□ -1.25
SPTA1-201ENST00000368147 HDHD2Q9H0R4 259 aa7.22□□□□□ -1.25
SPTA1-201ENST00000368147 EHD1Q9H4M9 534 aa7.22□□□□□ -1.25
SPTA1-201ENST00000368147 EVPLLA8MZ36 301 aa7.22□□□□□ -1.25
SPTA1-201ENST00000368147 AP3B1O00203 1094 aa7.22□□□□□ -1.25
SPTA1-201ENST00000368147 CLDN5O00501 218 aa7.22□□□□□ -1.25
SPTA1-201ENST00000368147 SOAT2O75908 522 aa7.22□□□□□ -1.25
SPTA1-201ENST00000368147 HAUS5O94927 633 aa7.22□□□□□ -1.25
SPTA1-201ENST00000368147 FMO4P31512 558 aa7.22□□□□□ -1.25
SPTA1-201ENST00000368147 METTL7BQ6UX53 244 aa7.22□□□□□ -1.25
SPTA1-201ENST00000368147 CENPLQ8N0S6 344 aaPredicted RBP7.22□□□□□ -1.25
SPTA1-201ENST00000368147 SMARCD1Q96GM5 515 aa7.22□□□□□ -1.25
SPTA1-201ENST00000368147 PDS5AQ29RF7 1337 aaKnown RBP7.22□□□□□ -1.25
SPTA1-201ENST00000368147 GLP2RO95838 553 aa7.22□□□□□ -1.25
SPTA1-201ENST00000368147 JCHAINP01591 159 aa7.22□□□□□ -1.25
SPTA1-201ENST00000368147 CLUP10909 449 aa7.22□□□□□ -1.25
SPTA1-201ENST00000368147 NPR2P20594 1047 aa7.22□□□□□ -1.25
SPTA1-201ENST00000368147 FLT3P36888 993 aa7.22□□□□□ -1.25
SPTA1-201ENST00000368147 BCL2L1Q07817 233 aa7.22□□□□□ -1.25
SPTA1-201ENST00000368147 NOGQ13253 232 aa7.22□□□□□ -1.25
SPTA1-201ENST00000368147 WLSQ5T9L3 541 aa7.22□□□□□ -1.25
SPTA1-201ENST00000368147 LRRN4Q8WUT4 740 aa7.22□□□□□ -1.25
SPTA1-201ENST00000368147 HIC2Q96JB3 615 aa7.22□□□□□ -1.25
SPTA1-201ENST00000368147 BBS4Q96RK4 519 aa7.22□□□□□ -1.25
SPTA1-201ENST00000368147 CDK5RAP1Q96SZ6 601 aaKnown RBP7.22□□□□□ -1.25
SPTA1-201ENST00000368147 RBM15Q96T37 977 aaKnown RBP eCLIP7.22□□□□□ -1.252e-6■■■□□ 16.1
SPTA1-201ENST00000368147 GTPBP2Q9BX10 602 aaKnown RBP7.22□□□□□ -1.25
SPTA1-201ENST00000368147 SLC4A5Q9BY07 1137 aa7.22□□□□□ -1.25
SPTA1-201ENST00000368147 TM6SF2Q9BZW4 377 aa7.22□□□□□ -1.25
SPTA1-201ENST00000368147 OSBPL2Q9H1P3 480 aa7.22□□□□□ -1.25
SPTA1-201ENST00000368147 TUBGCP4Q9UGJ1 667 aa7.22□□□□□ -1.25
SPTA1-201ENST00000368147 CRYL1Q9Y2S2 319 aa7.22□□□□□ -1.25
SPTA1-201ENST00000368147 TMA7Q9Y2S6 64 aaKnown RBP7.22□□□□□ -1.25
SPTA1-201ENST00000368147 KIAA0391O15091 583 aaKnown RBP7.21□□□□□ -1.25
SPTA1-201ENST00000368147 PHF2O75151 1096 aa7.21□□□□□ -1.25
SPTA1-201ENST00000368147 RASGRP1O95267 797 aa7.21□□□□□ -1.25
SPTA1-201ENST00000368147 CRTAMO95727 393 aa7.21□□□□□ -1.25
SPTA1-201ENST00000368147 MT-CO1P00395 513 aa7.21□□□□□ -1.25
SPTA1-201ENST00000368147 CYP2F1P24903 491 aa7.21□□□□□ -1.25
SPTA1-201ENST00000368147 EIF2B2P49770 351 aaKnown RBP7.21□□□□□ -1.25
SPTA1-201ENST00000368147 PRKAG1P54619 331 aa7.21□□□□□ -1.25
SPTA1-201ENST00000368147 GEMP55040 296 aa7.21□□□□□ -1.25
SPTA1-201ENST00000368147 MRPS6P82932 125 aaKnown RBP7.21□□□□□ -1.25
SPTA1-201ENST00000368147 STK4Q13043 487 aa7.21□□□□□ -1.25
SPTA1-201ENST00000368147 ACAD10Q6JQN1 1059 aa7.21□□□□□ -1.25
SPTA1-201ENST00000368147 LINC00523Q86TU6 105 aa7.21□□□□□ -1.25
SPTA1-201ENST00000368147 OR6K2Q8NGY2 324 aa7.21□□□□□ -1.25
SPTA1-201ENST00000368147 REXO4Q9GZR2 422 aaKnown RBP7.21□□□□□ -1.25
SPTA1-201ENST00000368147 FBXO44Q9H4M3 255 aa7.21□□□□□ -1.25
SPTA1-201ENST00000368147 TAF1DQ9H5J8 278 aaPredicted RBP7.21□□□□□ -1.25
SPTA1-201ENST00000368147 AGPAT3Q9NRZ7 376 aa7.21□□□□□ -1.25
SPTA1-201ENST00000368147 CCR1P32246 355 aa7.21□□□□□ -1.25
SPTA1-201ENST00000368147 ANXA11P50995 505 aaKnown RBP7.21□□□□□ -1.25
SPTA1-201ENST00000368147 BNC1Q01954 994 aa7.21□□□□□ -1.25
SPTA1-201ENST00000368147 ZNF618Q5T7W0 954 aa7.21□□□□□ -1.25
SPTA1-201ENST00000368147 RAP1GAP2Q684P5 730 aa7.21□□□□□ -1.25
SPTA1-201ENST00000368147 TXNDC11Q6PKC3 985 aa7.21□□□□□ -1.25
SPTA1-201ENST00000368147 TNS4Q8IZW8 715 aa7.21□□□□□ -1.25
SPTA1-201ENST00000368147 OR8H2Q8N162 312 aa7.21□□□□□ -1.25
SPTA1-201ENST00000368147 ATP6V1C2Q8NEY4 427 aa7.21□□□□□ -1.25
SPTA1-201ENST00000368147 SPATA20Q8TB22 786 aa7.21□□□□□ -1.25
SPTA1-201ENST00000368147 ATG4AQ8WYN0 398 aa7.21□□□□□ -1.25
SPTA1-201ENST00000368147 THAP2Q9H0W7 228 aa7.21□□□□□ -1.25
SPTA1-201ENST00000368147 MROH7Q68CQ1 1323 aa7.21□□□□□ -1.26
SPTA1-201ENST00000368147 LINC00854A0A1B0GVQ3 168 aa7.21□□□□□ -1.26
SPTA1-201ENST00000368147 INPP4BO15327 924 aa7.21□□□□□ -1.26
SPTA1-201ENST00000368147 ZNF682O95780 498 aa7.21□□□□□ -1.26
SPTA1-201ENST00000368147 ATP5BP06576 529 aaKnown RBP7.21□□□□□ -1.26
SPTA1-201ENST00000368147 CCNCP24863 283 aa7.21□□□□□ -1.26
SPTA1-201ENST00000368147 PSMD8P48556 350 aa7.21□□□□□ -1.26
SPTA1-201ENST00000368147 DDR2Q16832 855 aa7.21□□□□□ -1.26
SPTA1-201ENST00000368147 SLC45A4Q5BKX6 768 aa7.21□□□□□ -1.26
SPTA1-201ENST00000368147 NAPEPLDQ6IQ20 393 aa7.21□□□□□ -1.26
SPTA1-201ENST00000368147 POMZP3Q6PJE2 187 aa7.21□□□□□ -1.26
SPTA1-201ENST00000368147 LRRC74BQ6ZQY2 392 aa7.21□□□□□ -1.26
SPTA1-201ENST00000368147 PRPF39Q86UA1 669 aaKnown RBP7.21□□□□□ -1.26
SPTA1-201ENST00000368147 P3H2Q8IVL5 708 aa7.21□□□□□ -1.26
SPTA1-201ENST00000368147 CEP44Q9C0F1 390 aa7.21□□□□□ -1.26
SPTA1-201ENST00000368147 RSL24D1Q9UHA3 163 aaKnown RBP7.21□□□□□ -1.26
SPTA1-201ENST00000368147 AP4E1Q9UPM8 1137 aa7.21□□□□□ -1.26
SPTA1-201ENST00000368147 EIF3LQ9Y262 564 aaKnown RBP7.21□□□□□ -1.26
SPTA1-201ENST00000368147 PCDHB2Q9Y5E7 798 aa7.21□□□□□ -1.26
SPTA1-201ENST00000368147 KDM4FA0A1W2PPD8 638 aa7.21□□□□□ -1.26
SPTA1-201ENST00000368147 CCDC188H7C350 402 aa7.21□□□□□ -1.26
SPTA1-201ENST00000368147 FFAR2O15552 330 aa7.21□□□□□ -1.26
SPTA1-201ENST00000368147 RECQL4O94761 1208 aa7.21□□□□□ -1.26
SPTA1-201ENST00000368147 IGSF6O95976 241 aa7.21□□□□□ -1.26
SPTA1-201ENST00000368147 FGBP02675 491 aa7.21□□□□□ -1.26
SPTA1-201ENST00000368147 ZNF24P17028 368 aa7.21□□□□□ -1.26
SPTA1-201ENST00000368147 HDCP19113 662 aa7.21□□□□□ -1.26
SPTA1-201ENST00000368147 TPP2P29144 1249 aaPredicted RBP7.21□□□□□ -1.26
SPTA1-201ENST00000368147 ITGA8P53708 1063 aa7.21□□□□□ -1.26
SPTA1-201ENST00000368147 CAV3P56539 151 aa7.21□□□□□ -1.26
SPTA1-201ENST00000368147 ARMC4Q5T2S8 1044 aa7.21□□□□□ -1.26
SPTA1-201ENST00000368147 SCARA3Q6AZY7 606 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms