RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 CAAP1Q9H8G2 361 aa15.28■□□□□ 0.04
VAMP4-202ENST00000367740 VRTNQ9H8Y1 702 aa15.28■□□□□ 0.04
VAMP4-202ENST00000367740 CLIC5Q9NZA1 410 aa15.28■□□□□ 0.04
VAMP4-202ENST00000367740 ARHGAP20Q9P2F6 1191 aa15.28■□□□□ 0.04
VAMP4-202ENST00000367740 TPX2Q9ULW0 747 aaKnown RBP15.28■□□□□ 0.04
VAMP4-202ENST00000367740 FRMD3A2A2Y4 597 aa15.27■□□□□ 0.04
VAMP4-202ENST00000367740 ENO4A6NNW6 628 aa15.27■□□□□ 0.04
VAMP4-202ENST00000367740 RNASEH1O60930 286 aaKnown RBP15.27■□□□□ 0.04
VAMP4-202ENST00000367740 ATP5BP06576 529 aaKnown RBP15.27■□□□□ 0.04
VAMP4-202ENST00000367740 RALAP11233 206 aa15.27■□□□□ 0.04
VAMP4-202ENST00000367740 TGM2P21980 687 aa15.27■□□□□ 0.04
VAMP4-202ENST00000367740 LONP1P36776 959 aaKnown RBP15.27■□□□□ 0.04
VAMP4-202ENST00000367740 KIF11P52732 1056 aa15.27■□□□□ 0.04
VAMP4-202ENST00000367740 SFSWAPQ12872 951 aaKnown RBP15.27■□□□□ 0.04
VAMP4-202ENST00000367740 PSMD6Q15008 389 aa15.27■□□□□ 0.04
VAMP4-202ENST00000367740 BMT2Q1RMZ1 405 aa15.27■□□□□ 0.04
VAMP4-202ENST00000367740 HNRNPA1L2Q32P51 320 aaKnown RBP15.27■□□□□ 0.04
VAMP4-202ENST00000367740 HS1BP3Q53T59 392 aa15.27■□□□□ 0.04
VAMP4-202ENST00000367740 MCTP1Q6DN14 999 aa15.27■□□□□ 0.04
VAMP4-202ENST00000367740 MMAAQ8IVH4 418 aaKnown RBP15.27■□□□□ 0.04
VAMP4-202ENST00000367740 RDH13Q8NBN7 331 aa15.27■□□□□ 0.04
VAMP4-202ENST00000367740 OR14C36Q8NHC7 312 aa15.27■□□□□ 0.04
VAMP4-202ENST00000367740 MAPK15Q8TD08 544 aa15.27■□□□□ 0.04
VAMP4-202ENST00000367740 HPS3Q969F9 1004 aa15.27■□□□□ 0.04
VAMP4-202ENST00000367740 CCDC127Q96BQ5 260 aa15.27■□□□□ 0.04
VAMP4-202ENST00000367740 SGF29Q96ES7 293 aa15.27■□□□□ 0.04
VAMP4-202ENST00000367740 APOLD1Q96LR9 279 aa15.27■□□□□ 0.04
VAMP4-202ENST00000367740 CDK5RAP1Q96SZ6 601 aaKnown RBP15.27■□□□□ 0.04
VAMP4-202ENST00000367740 PNPLA8Q9NP80 782 aa15.27■□□□□ 0.04
VAMP4-202ENST00000367740 ENTPD2Q9Y5L3 495 aa15.27■□□□□ 0.04
VAMP4-202ENST00000367740 MAGEC1O60732 1142 aa15.26■□□□□ 0.03
VAMP4-202ENST00000367740 SLC8A1P32418 973 aa15.26■□□□□ 0.03
VAMP4-202ENST00000367740 CD70P32970 193 aa15.26■□□□□ 0.03
VAMP4-202ENST00000367740 SGSHP51688 502 aa15.26■□□□□ 0.03
VAMP4-202ENST00000367740 NDST1P52848 882 aa15.26■□□□□ 0.03
VAMP4-202ENST00000367740 CYP24A1Q07973 514 aa15.26■□□□□ 0.03
VAMP4-202ENST00000367740 OVGP1Q12889 678 aa15.26■□□□□ 0.03
VAMP4-202ENST00000367740 ZNF699Q32M78 642 aa15.26■□□□□ 0.03
VAMP4-202ENST00000367740 USP53Q70EK8 1073 aa15.26■□□□□ 0.03
VAMP4-202ENST00000367740 CRYBG2Q8N1P7 616 aa15.26■□□□□ 0.03
VAMP4-202ENST00000367740 MS4A3Q96HJ5 214 aa15.26■□□□□ 0.03
VAMP4-202ENST00000367740 ABCG4Q9H172 646 aa15.26■□□□□ 0.03
VAMP4-202ENST00000367740 KIAA1586Q9HCI6 787 aa15.26■□□□□ 0.03
VAMP4-202ENST00000367740 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.26■□□□□ 0.03
VAMP4-202ENST00000367740 MARCH2Q9P0N8 246 aa15.26■□□□□ 0.03
VAMP4-202ENST00000367740 STK17AQ9UEE5 414 aa15.26■□□□□ 0.03
VAMP4-202ENST00000367740 KIF3AQ9Y496 699 aa15.26■□□□□ 0.03
VAMP4-202ENST00000367740 LRBAP50851 2863 aa15.25■□□□□ 0.03
VAMP4-202ENST00000367740 SLC12A8A0AV02 714 aa15.25■□□□□ 0.03
VAMP4-202ENST00000367740 SFTPCP11686 197 aa15.25■□□□□ 0.03
VAMP4-202ENST00000367740 IDEP14735 1019 aa15.25■□□□□ 0.03
VAMP4-202ENST00000367740 POLR2EP19388 210 aaKnown RBP15.25■□□□□ 0.03
VAMP4-202ENST00000367740 PSMD8P48556 350 aa15.25■□□□□ 0.03
VAMP4-202ENST00000367740 DUSP3P51452 185 aaPredicted RBP15.25■□□□□ 0.03
VAMP4-202ENST00000367740 SRSF6Q13247 344 aaKnown RBP15.25■□□□□ 0.03
VAMP4-202ENST00000367740 ZNF667Q5HYK9 610 aa15.25■□□□□ 0.03
VAMP4-202ENST00000367740 C9orf64Q5T6V5 341 aa15.25■□□□□ 0.03
VAMP4-202ENST00000367740 HIST2H2BCQ6DN03 193 aa15.25■□□□□ 0.03
VAMP4-202ENST00000367740 FOXR1Q6PIV2 292 aa15.25■□□□□ 0.03
VAMP4-202ENST00000367740 SND1Q7KZF4 910 aaKnown RBP eCLIP15.25■□□□□ 0.03
VAMP4-202ENST00000367740 IFI44Q8TCB0 444 aa15.25■□□□□ 0.03
VAMP4-202ENST00000367740 PLD4Q96BZ4 506 aa15.25■□□□□ 0.03
VAMP4-202ENST00000367740 EPN3Q9H201 632 aa15.25■□□□□ 0.03
VAMP4-202ENST00000367740 CA5BQ9Y2D0 317 aa15.25■□□□□ 0.03
VAMP4-202ENST00000367740 USP3Q9Y6I4 520 aa15.25■□□□□ 0.03
VAMP4-202ENST00000367740 ICE1Q9Y2F5 2266 aa15.24■□□□□ 0.03
VAMP4-202ENST00000367740 DOPEY1Q5JWR5 2465 aa15.24■□□□□ 0.03
VAMP4-202ENST00000367740 TBC1D3DA0A087WVF3 549 aa15.24■□□□□ 0.03
VAMP4-202ENST00000367740 TBC1D3IA0A087WXS9 549 aa15.24■□□□□ 0.03
VAMP4-202ENST00000367740 TBC1D3EA0A087X179 549 aa15.24■□□□□ 0.03
VAMP4-202ENST00000367740 TBC1D3KA0A087X1G2 549 aa15.24■□□□□ 0.03
VAMP4-202ENST00000367740 TBC1D3FA6NER0 549 aaPredicted RBP15.24■□□□□ 0.03
VAMP4-202ENST00000367740 TBC1D3LB9A6J9 549 aa15.24■□□□□ 0.03
VAMP4-202ENST00000367740 PPFIA2O75334 1257 aa15.24■□□□□ 0.03
VAMP4-202ENST00000367740 CLSTN1O94985 981 aa15.24■□□□□ 0.03
VAMP4-202ENST00000367740 CENPBP07199 599 aaPredicted RBP15.24■□□□□ 0.03
VAMP4-202ENST00000367740 TBC1D3HP0C7X1 549 aa15.24■□□□□ 0.03
VAMP4-202ENST00000367740 GOT1P17174 413 aa15.24■□□□□ 0.03
VAMP4-202ENST00000367740 MAT2AP31153 395 aaKnown RBP15.24■□□□□ 0.03
VAMP4-202ENST00000367740 HOXD13P35453 343 aa15.24■□□□□ 0.03
VAMP4-202ENST00000367740 MLLT3P42568 568 aaPredicted RBP15.24■□□□□ 0.03
VAMP4-202ENST00000367740 FOXK1P85037 733 aa15.24■□□□□ 0.03
VAMP4-202ENST00000367740 ARID5BQ14865 1188 aa15.24■□□□□ 0.03
VAMP4-202ENST00000367740 TRIP4Q15650 581 aaPredicted RBP15.24■□□□□ 0.03
VAMP4-202ENST00000367740 TBC1D3GQ6DHY5 549 aa15.24■□□□□ 0.03
VAMP4-202ENST00000367740 TBC1D3CQ6IPX1 549 aa15.24■□□□□ 0.03
VAMP4-202ENST00000367740 TBC1D3Q8IZP1 549 aaPredicted RBP15.24■□□□□ 0.03
VAMP4-202ENST00000367740 ARL14Q8N4G2 192 aa15.24■□□□□ 0.03
VAMP4-202ENST00000367740 GRAMD1AQ96CP6 724 aa15.24■□□□□ 0.03
VAMP4-202ENST00000367740 EPSTI1Q96J88 318 aa15.24■□□□□ 0.03
VAMP4-202ENST00000367740 MRGPRX3Q96LB0 322 aa15.24■□□□□ 0.03
VAMP4-202ENST00000367740 WDR70Q9NW82 654 aa15.24■□□□□ 0.03
VAMP4-202ENST00000367740 NLGN3Q9NZ94 848 aa15.24■□□□□ 0.03
VAMP4-202ENST00000367740 CYTH4Q9UIA0 394 aa15.24■□□□□ 0.03
VAMP4-202ENST00000367740 STRIP2Q9ULQ0 834 aa15.24■□□□□ 0.03
VAMP4-202ENST00000367740 RP1P56715 2156 aa15.24■□□□□ 0.03
VAMP4-202ENST00000367740 FBN2P35556 2912 aa15.23■□□□□ 0.03
VAMP4-202ENST00000367740 UBE4BO95155 1302 aa15.23■□□□□ 0.03
VAMP4-202ENST00000367740 BLACEA4D250 179 aa15.23■□□□□ 0.03
VAMP4-202ENST00000367740 PIAS2O75928 621 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms