RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 ZNF397Q8NF99 534 aaPredicted RBP15.18■□□□□ 0.02
SF3B5-201ENST00000367569 MDGA1Q8NFP4 955 aa15.18■□□□□ 0.02
SF3B5-201ENST00000367569 CYB5D2Q8WUJ1 264 aa15.18■□□□□ 0.02
SF3B5-201ENST00000367569 TMA16Q96EY4 203 aaKnown RBP15.18■□□□□ 0.02
SF3B5-201ENST00000367569 NPY6RQ99463 290 aa15.18■□□□□ 0.02
SF3B5-201ENST00000367569 SYT11Q9BT88 431 aa15.18■□□□□ 0.02
SF3B5-201ENST00000367569 SLC6A17Q9H1V8 727 aa15.18■□□□□ 0.02
SF3B5-201ENST00000367569 ADAM22Q9P0K1 906 aa15.18■□□□□ 0.02
SF3B5-201ENST00000367569 STOML2Q9UJZ1 356 aa15.18■□□□□ 0.02
SF3B5-201ENST00000367569 TCRBV21S2A2A0A5A6 115 aa15.17■□□□□ 0.02
SF3B5-201ENST00000367569 ADCY5O95622 1261 aa15.17■□□□□ 0.02
SF3B5-201ENST00000367569 GYPCP04921 128 aa15.17■□□□□ 0.02
SF3B5-201ENST00000367569 PLEKP08567 350 aaPredicted RBP15.17■□□□□ 0.02
SF3B5-201ENST00000367569 HOXB2P14652 356 aa15.17■□□□□ 0.02
SF3B5-201ENST00000367569 TNFAIP3P21580 790 aa15.17■□□□□ 0.02
SF3B5-201ENST00000367569 DEUP1Q05D60 604 aa15.17■□□□□ 0.02
SF3B5-201ENST00000367569 MS4A13Q5J8X5 152 aa15.17■□□□□ 0.02
SF3B5-201ENST00000367569 PMS2CLQ68D20 193 aa15.17■□□□□ 0.02
SF3B5-201ENST00000367569 TMEM215Q68D42 235 aa15.17■□□□□ 0.02
SF3B5-201ENST00000367569 FAM131BQ86XD5 332 aa15.17■□□□□ 0.02
SF3B5-201ENST00000367569 MFN1Q8IWA4 741 aa15.17■□□□□ 0.02
SF3B5-201ENST00000367569 CHPFQ8IZ52 775 aa15.17■□□□□ 0.02
SF3B5-201ENST00000367569 ATP6V0D2Q8N8Y2 350 aa15.17■□□□□ 0.02
SF3B5-201ENST00000367569 HMGB4Q8WW32 186 aa15.17■□□□□ 0.02
SF3B5-201ENST00000367569 SIK2Q9H0K1 926 aa15.17■□□□□ 0.02
SF3B5-201ENST00000367569 TMEM59LQ9UK28 342 aa15.17■□□□□ 0.02
SF3B5-201ENST00000367569 VANGL2Q9ULK5 521 aa15.17■□□□□ 0.02
SF3B5-201ENST00000367569 STAP1Q9ULZ2 295 aa15.17■□□□□ 0.02
SF3B5-201ENST00000367569 CKAP5Q14008 2032 aa15.17■□□□□ 0.02
SF3B5-201ENST00000367569 KCNU1A8MYU2 1149 aa15.16■□□□□ 0.02
SF3B5-201ENST00000367569 F5H5T6 163 aa15.16■□□□□ 0.02
SF3B5-201ENST00000367569 PAGE1O75459 146 aa15.16■□□□□ 0.02
SF3B5-201ENST00000367569 ABCB4P21439 1286 aa15.16■□□□□ 0.02
SF3B5-201ENST00000367569 CCR1P32246 355 aa15.16■□□□□ 0.02
SF3B5-201ENST00000367569 TNFRSF4P43489 277 aa15.16■□□□□ 0.02
SF3B5-201ENST00000367569 KLHL30Q0D2K2 578 aa15.16■□□□□ 0.02
SF3B5-201ENST00000367569 EIF4EBP2Q13542 120 aaPredicted RBP15.16■□□□□ 0.02
SF3B5-201ENST00000367569 FUT11Q495W5 492 aa15.16■□□□□ 0.02
SF3B5-201ENST00000367569 N4BP2L1Q5TBK1 243 aaPredicted RBP15.16■□□□□ 0.02
SF3B5-201ENST00000367569 RNF43Q68DV7 783 aa15.16■□□□□ 0.02
SF3B5-201ENST00000367569 SMYD5Q6GMV2 418 aa15.16■□□□□ 0.02
SF3B5-201ENST00000367569 KIAA1211LQ6NV74 962 aa15.16■□□□□ 0.02
SF3B5-201ENST00000367569 DNAJC24Q6P3W2 148 aa15.16■□□□□ 0.02
SF3B5-201ENST00000367569 CHST9Q7L1S5 443 aa15.16■□□□□ 0.02
SF3B5-201ENST00000367569 C14orf80Q86SX3 495 aa15.16■□□□□ 0.02
SF3B5-201ENST00000367569 PHF13Q86YI8 300 aaPredicted RBP15.16■□□□□ 0.02
SF3B5-201ENST00000367569 RXFP2Q8WXD0 754 aa15.16■□□□□ 0.02
SF3B5-201ENST00000367569 BTN2A3PQ96KV6 586 aa15.16■□□□□ 0.02
SF3B5-201ENST00000367569 MCEEQ96PE7 176 aa15.16■□□□□ 0.02
SF3B5-201ENST00000367569 SELENOOQ9BVL4 669 aa15.16■□□□□ 0.02
SF3B5-201ENST00000367569 TKTL2Q9H0I9 626 aa15.16■□□□□ 0.02
SF3B5-201ENST00000367569 GGA2Q9UJY4 613 aa15.16■□□□□ 0.02
SF3B5-201ENST00000367569 FBXO10Q9UK96 956 aa15.16■□□□□ 0.02
SF3B5-201ENST00000367569 HS3ST4Q9Y661 456 aa15.16■□□□□ 0.02
SF3B5-201ENST00000367569 DOCK4Q8N1I0 1966 aa15.15■□□□□ 0.02
SF3B5-201ENST00000367569 TYW5A2RUC4 315 aaKnown RBP15.15■□□□□ 0.02
SF3B5-201ENST00000367569 DDX3XO00571 662 aaKnown RBP eCLIP15.15■□□□□ 0.024e-87■■■■□ 20
SF3B5-201ENST00000367569 AP5Z1O43299 807 aa15.15■□□□□ 0.02
SF3B5-201ENST00000367569 ALDH1A2O94788 518 aa15.15■□□□□ 0.02
SF3B5-201ENST00000367569 PABPC1P11940 636 aaKnown RBP15.15■□□□□ 0.02
SF3B5-201ENST00000367569 HLA-EP13747 358 aa15.15■□□□□ 0.02
SF3B5-201ENST00000367569 RRM1P23921 792 aa15.15■□□□□ 0.02
SF3B5-201ENST00000367569 CASP14P31944 242 aa15.15■□□□□ 0.02
SF3B5-201ENST00000367569 IL12RB1P42701 662 aa15.15■□□□□ 0.02
SF3B5-201ENST00000367569 LMAN2Q12907 356 aa15.15■□□□□ 0.02
SF3B5-201ENST00000367569 CDH18Q13634 790 aa15.15■□□□□ 0.02
SF3B5-201ENST00000367569 HSF5Q4G112 596 aaPredicted RBP15.15■□□□□ 0.02
SF3B5-201ENST00000367569 FSCBQ5H9T9 825 aa15.15■□□□□ 0.02
SF3B5-201ENST00000367569 EOGTQ5NDL2 527 aa15.15■□□□□ 0.02
SF3B5-201ENST00000367569 C11orf74Q86VG3 221 aa15.15■□□□□ 0.02
SF3B5-201ENST00000367569 FRMD1Q8N878 549 aa15.15■□□□□ 0.02
SF3B5-201ENST00000367569 RLN3Q8WXF3 142 aa15.15■□□□□ 0.02
SF3B5-201ENST00000367569 IGSF8Q969P0 613 aa15.15■□□□□ 0.02
SF3B5-201ENST00000367569 RPRD1AQ96P16 312 aaPredicted RBP15.15■□□□□ 0.02
SF3B5-201ENST00000367569 PRMT1Q99873 361 aaKnown RBP15.15■□□□□ 0.02
SF3B5-201ENST00000367569 EDEM2Q9BV94 578 aa15.15■□□□□ 0.02
SF3B5-201ENST00000367569 CD93Q9NPY3 652 aa15.15■□□□□ 0.02
SF3B5-201ENST00000367569 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.15■□□□□ 0.02
SF3B5-201ENST00000367569 BCCIPQ9P287 314 aaKnown RBP eCLIP15.15■□□□□ 0.02
SF3B5-201ENST00000367569 MYO6Q9UM54 1294 aa15.15■□□□□ 0.02
SF3B5-201ENST00000367569 CEP295Q9C0D2 2601 aa15.15■□□□□ 0.02
SF3B5-201ENST00000367569 CEP192Q8TEP8 1941 aa15.14■□□□□ 0.01
SF3B5-201ENST00000367569 C4orf47A7E2U8 309 aa15.14■□□□□ 0.01
SF3B5-201ENST00000367569 PATE3B3GLJ2 98 aa15.14■□□□□ 0.01
SF3B5-201ENST00000367569 CCP110O43303 1012 aa15.14■□□□□ 0.01
SF3B5-201ENST00000367569 LUC7L3O95232 432 aaKnown RBP15.14■□□□□ 0.01
SF3B5-201ENST00000367569 KCNK5O95279 499 aa15.14■□□□□ 0.01
SF3B5-201ENST00000367569 CALB1P05937 261 aa15.14■□□□□ 0.01
SF3B5-201ENST00000367569 CCDC172P0C7W6 258 aa15.14■□□□□ 0.01
SF3B5-201ENST00000367569 PDGFRAP16234 1089 aa15.14■□□□□ 0.01
SF3B5-201ENST00000367569 PRKCHP24723 683 aa15.14■□□□□ 0.01
SF3B5-201ENST00000367569 NTSR1P30989 418 aa15.14■□□□□ 0.01
SF3B5-201ENST00000367569 SDC4P31431 198 aa15.14■□□□□ 0.01
SF3B5-201ENST00000367569 RDXP35241 583 aaKnown RBP15.14■□□□□ 0.01
SF3B5-201ENST00000367569 RFC1P35251 1148 aaPredicted RBP15.14■□□□□ 0.01
SF3B5-201ENST00000367569 SCNN1AP37088 669 aa15.14■□□□□ 0.01
SF3B5-201ENST00000367569 ZNF445P59923 1031 aa15.14■□□□□ 0.01
SF3B5-201ENST00000367569 ZNF234Q14588 700 aa15.14■□□□□ 0.01
SF3B5-201ENST00000367569 SLC25A52Q3SY17 297 aa15.14■□□□□ 0.01
SF3B5-201ENST00000367569 CCDC14Q49A88 953 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms