RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 NDST1P52848 882 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 AIF1P55008 147 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 SLC16A10Q8TF71 515 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 CASS4Q9NQ75 786 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 RPL22P35268 128 aaKnown RBP12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 ATP6AP1LQ52LC2 224 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 TATDN1Q6P1N9 297 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 FAM131BQ86XD5 332 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 RAB42Q8N4Z0 105 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 ERVK-5Q9HDB9 667 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 XPNPEP3Q9NQH7 507 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 RPTORQ8N122 1335 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 SLC22A2O15244 555 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 WDR47O94967 919 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 TPSB2P20231 275 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 ADSLP30566 484 aaPredicted RBP12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 DAB2P98082 770 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 MRPL28Q13084 256 aaKnown RBP12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 TPSAB1Q15661 275 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 NFE2Q16621 373 aaPredicted RBP12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 HMG20AQ9NP66 347 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 ENTPD7Q9NQZ7 604 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 PDK3Q15120 406 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 ECM1Q16610 540 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 TBCELQ5QJ74 424 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 PSTKQ8IV42 348 aaKnown RBP12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 FITM2Q8N6M3 262 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 SLC4A9Q96Q91 983 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 MYPNQ86TC9 1320 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 GSC2O15499 205 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 CLOCKO15516 846 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 DSG3P32926 999 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 ADGRD1Q6QNK2 874 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 MON1BQ7L1V2 547 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 POU5F2Q8N7G0 328 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 PYDC1Q8WXC3 89 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 UGT2B28Q9BY64 529 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 ARHGEF3Q9NR81 526 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 GLP2RO95838 553 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 BNIP2Q12982 314 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 C2orf69Q8N8R5 385 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 PPP1R10Q96QC0 940 aaKnown RBP12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 SLCO1B3Q9NPD5 702 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 STXBP5LQ9Y2K9 1186 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 TMC7Q7Z402 723 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 CERS2Q96G23 380 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 CDRT15Q96T59 188 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 CINPQ9BW66 212 aaPredicted RBP12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 SPAG4Q9NPE6 437 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 KRT75O95678 551 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 JCHAINP01591 159 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 COX4I1P13073 169 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 PAX3P23760 479 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 SLC30A10Q6XR72 485 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 MAB21L3Q8N8X9 362 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 THUMPD3Q9BV44 507 aaKnown RBP12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 TNFSF13BQ9Y275 285 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 NDUFAF1Q9Y375 327 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 KRT20P35900 424 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 GLB1LQ6UWU2 654 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 SVOPQ8N4V2 548 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 BTBD9Q96Q07 612 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 GRHL1Q9NZI5 618 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 HBS1LQ9Y450 684 aaKnown RBP12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 M0R2N6 131 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 MSH3P20585 1137 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 CHKAP35790 457 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 ECHDC2Q86YB7 292 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 ZNF526Q8TF50 670 aaPredicted RBP12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 TMEM191CA6NGB0 347 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 TPP1O14773 563 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 CAPN15O75808 1086 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 IYDQ6PHW0 289 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 RNF157Q96PX1 679 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 RAP2CQ9Y3L5 183 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 PNMA8CA0A1B0GUJ8 204 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 FLT3P36888 993 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 HARS2P49590 506 aaKnown RBP12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 PURAQ00577 322 aaKnown RBP12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 SLC25A41Q8N5S1 370 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 ADGRE3Q9BY15 652 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 AK5Q9Y6K8 562 aa12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 RP1L1Q8IWN7 2480 aaPredicted RBP12.04□□□□□ -0.48
CDC42BPA-202ENST00000366764 IQCA1LA6NCM1 817 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 MEI4A8MW99 385 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 KRT36O76013 467 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 SMARCD1Q96GM5 515 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 MYO1GB0I1T2 1018 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 IFNA14P01570 189 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 GLRBP48167 497 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 PIK3CGP48736 1102 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 ADIGQ0VDE8 80 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 APOL4Q9BPW4 351 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 PSMD13Q9UNM6 376 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 CDK5RAP2Q96SN8 1893 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 STX7O15400 261 aaKnown RBP12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 CCR1P32246 355 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 PTGIRP43119 386 aa12.03□□□□□ -0.48
CDC42BPA-202ENST00000366764 TGFB2P61812 414 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms