RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 BSPRYQ5W0U4 402 aa12.9□□□□□ -0.34
MRPL55-209ENST00000366735 ZNF776Q68DI1 518 aaPredicted RBP12.9□□□□□ -0.34
MRPL55-209ENST00000366735 CCNI2Q6ZMN8 369 aaPredicted RBP12.9□□□□□ -0.34
MRPL55-209ENST00000366735 SMYD4Q8IYR2 804 aaPredicted RBP12.9□□□□□ -0.34
MRPL55-209ENST00000366735 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.9□□□□□ -0.34
MRPL55-209ENST00000366735 RHBDD1Q8TEB9 315 aa12.9□□□□□ -0.34
MRPL55-209ENST00000366735 SORCS1Q8WY21 1168 aa12.9□□□□□ -0.34
MRPL55-209ENST00000366735 KCTD13Q8WZ19 329 aa12.9□□□□□ -0.34
MRPL55-209ENST00000366735 SKA1Q96BD8 255 aa12.9□□□□□ -0.34
MRPL55-209ENST00000366735 MRFAP1L1Q96HT8 127 aa12.9□□□□□ -0.34
MRPL55-209ENST00000366735 ABCB8Q9NUT2 735 aa12.9□□□□□ -0.34
MRPL55-209ENST00000366735 FNDC3AQ9Y2H6 1198 aaKnown RBP12.9□□□□□ -0.34
MRPL55-209ENST00000366735 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.9□□□□□ -0.34
MRPL55-209ENST00000366735 CABIN1Q9Y6J0 2220 aa12.89□□□□□ -0.35
MRPL55-209ENST00000366735 DFNA5O60443 496 aa12.89□□□□□ -0.35
MRPL55-209ENST00000366735 TSPAN3O60637 253 aa12.89□□□□□ -0.35
MRPL55-209ENST00000366735 HLA-EP13747 358 aa12.89□□□□□ -0.35
MRPL55-209ENST00000366735 HLA-FP30511 346 aa12.89□□□□□ -0.35
MRPL55-209ENST00000366735 GRK6P43250 576 aa12.89□□□□□ -0.35
MRPL55-209ENST00000366735 FKBP3Q00688 224 aaKnown RBP12.89□□□□□ -0.35
MRPL55-209ENST00000366735 CETN1Q12798 172 aa12.89□□□□□ -0.35
MRPL55-209ENST00000366735 COL9A2Q14055 689 aaPredicted RBP12.89□□□□□ -0.35
MRPL55-209ENST00000366735 TMEM215Q68D42 235 aa12.89□□□□□ -0.35
MRPL55-209ENST00000366735 MBLAC2Q68D91 279 aa12.89□□□□□ -0.35
MRPL55-209ENST00000366735 PNPLA1Q8N8W4 532 aa12.89□□□□□ -0.35
MRPL55-209ENST00000366735 RBBP8NLQ8NC74 664 aaPredicted RBP12.89□□□□□ -0.35
MRPL55-209ENST00000366735 CYB5D2Q8WUJ1 264 aa12.89□□□□□ -0.35
MRPL55-209ENST00000366735 NELFBQ8WX92 580 aa12.89□□□□□ -0.35
MRPL55-209ENST00000366735 IRGQQ8WZA9 623 aa12.89□□□□□ -0.35
MRPL55-209ENST00000366735 EDEM1Q92611 657 aa12.89□□□□□ -0.35
MRPL55-209ENST00000366735 TATDN2Q93075 761 aa12.89□□□□□ -0.35
MRPL55-209ENST00000366735 IGSF8Q969P0 613 aa12.89□□□□□ -0.35
MRPL55-209ENST00000366735 TRIM5Q9C035 493 aa12.89□□□□□ -0.35
MRPL55-209ENST00000366735 TMEM245Q9H330 911 aa12.89□□□□□ -0.35
MRPL55-209ENST00000366735 FANCLQ9NW38 375 aa12.89□□□□□ -0.35
MRPL55-209ENST00000366735 SFMBT1Q9UHJ3 866 aa12.89□□□□□ -0.35
MRPL55-209ENST00000366735 CLEC4EQ9ULY5 219 aa12.89□□□□□ -0.35
MRPL55-209ENST00000366735 COQ4Q9Y3A0 265 aa12.89□□□□□ -0.35
MRPL55-209ENST00000366735 ZZEF1O43149 2961 aa12.89□□□□□ -0.35
MRPL55-209ENST00000366735 ACACAQ13085 2346 aa12.88□□□□□ -0.35
MRPL55-209ENST00000366735 A0A1B0GVT2 93 aa12.88□□□□□ -0.35
MRPL55-209ENST00000366735 BICDL2A1A5D9 508 aa12.88□□□□□ -0.35
MRPL55-209ENST00000366735 POM121CA8CG34 1229 aa12.88□□□□□ -0.35
MRPL55-209ENST00000366735 FSBPO95073 299 aa12.88□□□□□ -0.35
MRPL55-209ENST00000366735 MOCS3O95396 460 aa12.88□□□□□ -0.35
MRPL55-209ENST00000366735 ASLP04424 464 aa12.88□□□□□ -0.35
MRPL55-209ENST00000366735 PAEPP09466 180 aa12.88□□□□□ -0.35
MRPL55-209ENST00000366735 CD27P26842 260 aa12.88□□□□□ -0.35
MRPL55-209ENST00000366735 ACSL1P33121 698 aa12.88□□□□□ -0.35
MRPL55-209ENST00000366735 C21orf59P57076 290 aa12.88□□□□□ -0.35
MRPL55-209ENST00000366735 DAOAP59103 153 aa12.88□□□□□ -0.35
MRPL55-209ENST00000366735 LRRC63Q05C16 580 aa12.88□□□□□ -0.35
MRPL55-209ENST00000366735 TSR1Q2NL82 804 aaKnown RBP12.88□□□□□ -0.35
MRPL55-209ENST00000366735 HS1BP3Q53T59 392 aa12.88□□□□□ -0.35
MRPL55-209ENST00000366735 CDKAL1Q5VV42 579 aa12.88□□□□□ -0.35
MRPL55-209ENST00000366735 KLHL10Q6JEL2 608 aa12.88□□□□□ -0.35
MRPL55-209ENST00000366735 MSANTD2Q6P1R3 559 aa12.88□□□□□ -0.35
MRPL55-209ENST00000366735 USP30Q70CQ3 517 aa12.88□□□□□ -0.35
MRPL55-209ENST00000366735 MFN1Q8IWA4 741 aa12.88□□□□□ -0.35
MRPL55-209ENST00000366735 HJURPQ8NCD3 748 aaPredicted RBP12.88□□□□□ -0.35
MRPL55-209ENST00000366735 BAHD1Q8TBE0 780 aaPredicted RBP12.88□□□□□ -0.35
MRPL55-209ENST00000366735 PTCD2Q8WV60 388 aaKnown RBP12.88□□□□□ -0.35
MRPL55-209ENST00000366735 P2RY11Q96G91 374 aa12.88□□□□□ -0.35
MRPL55-209ENST00000366735 TRIM62Q9BVG3 475 aa12.88□□□□□ -0.35
MRPL55-209ENST00000366735 ACE2Q9BYF1 805 aaPredicted RBP12.88□□□□□ -0.35
MRPL55-209ENST00000366735 C6orf106Q9H6K1 298 aaPredicted RBP12.88□□□□□ -0.35
MRPL55-209ENST00000366735 IL21RQ9HBE5 538 aa12.88□□□□□ -0.35
MRPL55-209ENST00000366735 TM9SF3Q9HD45 589 aa12.88□□□□□ -0.35
MRPL55-209ENST00000366735 ARMCX3Q9UH62 379 aaPredicted RBP12.88□□□□□ -0.35
MRPL55-209ENST00000366735 TPX2Q9ULW0 747 aaKnown RBP12.88□□□□□ -0.35
MRPL55-209ENST00000366735 CTNND2Q9UQB3 1225 aa12.88□□□□□ -0.35
MRPL55-209ENST00000366735 ANKRD6Q9Y2G4 727 aa12.88□□□□□ -0.35
MRPL55-209ENST00000366735 DMXL2Q8TDJ6 3036 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 YJEFN3A6XGL0 299 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 E7ENQ6 273 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 O00370 1275 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 SART1O43290 800 aaKnown RBP12.87□□□□□ -0.35
MRPL55-209ENST00000366735 MSI1O43347 362 aaKnown RBP12.87□□□□□ -0.35
MRPL55-209ENST00000366735 TNFSF14O43557 240 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 PCDHGA12O60330 932 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 TBL1XO60907 577 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 FBXO21O94952 628 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 LTFP02788 710 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 C7P10643 843 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 LCP1P13796 627 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 CSNK1EP49674 416 aaKnown RBP12.87□□□□□ -0.35
MRPL55-209ENST00000366735 RPS14P62263 151 aaKnown RBP12.87□□□□□ -0.35
MRPL55-209ENST00000366735 FANCCQ00597 558 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 CDH18Q13634 790 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 CBWD6Q4V339 395 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 CBWD3Q5JTY5 395 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 CBWD5Q5RIA9 395 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 TTI2Q6NXR4 508 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 LCLAT1Q6UWP7 414 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 DBX2Q6ZNG2 339 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 BHLHA9Q7RTU4 235 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 TMPRSS7Q7RTY8 843 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 KIAA0907Q7Z7F0 614 aaPredicted RBP12.87□□□□□ -0.35
MRPL55-209ENST00000366735 ADIPOR2Q86V24 386 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 C1orf216Q8TAB5 229 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms