RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 SH2B2O14492 632 aaPredicted RBP0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 ZEB2O60315 1214 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 FOXH1O75593 365 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 RFPL3O75679 317 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 STK10O94804 968 aaKnown RBP0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 WDR47O94967 919 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 NTSR2O95665 410 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 GRPP07492 148 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 CHRNB2P17787 502 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 SDSP20132 328 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 MCM3P25205 808 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 MARK3P27448 753 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 TYK2P29597 1187 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 IDUAP35475 653 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 IL15P40933 162 aaPredicted RBP0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 RFX5P48382 616 aaPredicted RBP0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 ZNF132P52740 706 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 LINC01547P58512 204 aaPredicted RBP0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 TIRAPP58753 221 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 CALCRLQ16602 461 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 ANXA2RQ3ZCQ2 193 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 ZFP69Q49AA0 526 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 CEACAM20Q6UY09 585 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 Q6ZSV7 163 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 NEK10Q6ZWH5 1172 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 ZNF367Q7RTV3 350 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 TTC7BQ86TV6 843 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 NFE4Q86UQ8 179 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 SFR1Q86XK3 245 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 FAM185AQ8N0U4 392 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 BMPERQ8N8U9 685 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 JMYQ8N9B5 988 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 WDR20Q8TBZ3 569 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 BPIFB1Q8TDL5 484 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 CELF1Q92879 486 aaKnown RBP0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 KLHL29Q96CT2 875 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 MTBPQ96DY7 904 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 MOCOSQ96EN8 888 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 WDYHV1Q96HA8 205 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 ABHD8Q96I13 439 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 POM121L2Q96KW2 1035 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 APOLD1Q96LR9 279 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 DEPDC7Q96QD5 511 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 OR1F2PQ96R84 312 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 WDR77Q9BQA1 342 aaPredicted RBP0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 RTBDNQ9BSG5 229 aaPredicted RBP0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 CHRDL1Q9BU40 450 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 SORBS1Q9BX66 1292 aaKnown RBP0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 RTN4RQ9BZR6 473 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 ABCF3Q9NUQ8 709 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 FAM118AQ9NWS6 357 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 USP35Q9P2H5 1018 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 AGO1Q9UL18 857 aaKnown RBP0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 POLHQ9Y253 713 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 SLC6A5Q9Y345 797 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 LOXL2Q9Y4K0 774 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 PCDHA13Q9Y5I0 950 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 GPR45Q9Y5Y3 372 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 CFAP20Q9Y6A4 193 aaKnown RBP0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 CROCCQ5TZA2 2017 aa0.25□□□□□ -2.37
RNU6-54P-201ENST00000365563 ZNF646O15015 1829 aaPredicted RBP0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 SYNE2Q8WXH0 6885 aaKnown RBP0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 IGHV4-28A0A0C4DH34 117 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 CFAP69A5D8W1 941 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 MBD3L4A6NDZ8 208 aaPredicted RBP0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 MBD3L3A6NE82 208 aaPredicted RBP0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 PRSS29PA6NIE9 313 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 MBD3L5A6NJ08 208 aaPredicted RBP0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 TCP11X1B4DZS4 312 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 HHLA1C9JL84 531 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 I6L893 689 aaPredicted RBP0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 EXOC5O00471 708 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 PRAMEF2O60811 474 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 UNC5CO95185 931 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 AFPP02771 609 aaKnown RBP0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 LCKP06239 509 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 ENO1P06733 434 aaKnown RBP0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 PATE4P0C8F1 98 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 TRIM49P0CI25 452 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 TRIM49CP0CI26 452 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 TMIGD3P0DMS9 266 aaPredicted RBP0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 OSMP13725 252 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 ZNF26P17031 533 aaPredicted RBP0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 PDCP20941 246 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 GPTP24298 496 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 PRDX5P30044 214 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 CHRNB4P30926 498 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 MCM5P33992 734 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 GALNSP34059 522 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 HOXD12P35452 270 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 MTNR1BP49286 362 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 PMS2P54278 862 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 ECT2LQ008S8 904 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 BNC1Q01954 994 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 ZBTB16Q05516 673 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 RUNX1T1Q06455 604 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 FAPQ12884 760 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 SNAPC2Q13487 334 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 ITGA9Q13797 1035 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms